RNA–Protein interactions for RNA: ENST00000509903.5

CAST-228, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CAST, Length 2,171 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-228ENST00000509903 CEP164Q9UPV0 1460 aa11.53□□□□□ -0.56
CAST-228ENST00000509903 SPDYE4A6NLX3 237 aa11.52□□□□□ -0.57
CAST-228ENST00000509903 TSHZ2Q9NRE2 1034 aa11.52□□□□□ -0.57
CAST-228ENST00000509903 NCAPD3P42695 1498 aa11.52□□□□□ -0.57
CAST-228ENST00000509903 KIF21BO75037 1637 aa11.51□□□□□ -0.57
CAST-228ENST00000509903 TOP2BQ02880 1626 aa11.48□□□□□ -0.57
CAST-228ENST00000509903 TTBK1Q5TCY1 1321 aaPredicted RBP11.48□□□□□ -0.57
CAST-228ENST00000509903 BIVM-ERCC5R4GMW8 1640 aa11.45□□□□□ -0.58
CAST-228ENST00000509903 MKRN4PQ13434 485 aaPredicted RBP11.44□□□□□ -0.58
CAST-228ENST00000509903 PROM2Q8N271 834 aa11.44□□□□□ -0.58
CAST-228ENST00000509903 GTF3C3Q9Y5Q9 886 aa11.44□□□□□ -0.58
CAST-228ENST00000509903 BBXQ8WY36 941 aaPredicted RBP11.44□□□□□ -0.58
CAST-228ENST00000509903 CLIP1P30622 1438 aa11.43□□□□□ -0.58
CAST-228ENST00000509903 CCER1Q8TC90 406 aaPredicted RBP11.43□□□□□ -0.58
CAST-228ENST00000509903 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.43□□□□□ -0.58
CAST-228ENST00000509903 RAPGEF2Q9Y4G8 1499 aa11.42□□□□□ -0.58
CAST-228ENST00000509903 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.41□□□□□ -0.58
CAST-228ENST00000509903 CFTRP13569 1480 aa11.4□□□□□ -0.59
CAST-228ENST00000509903 ZNF219Q9P2Y4 722 aaPredicted RBP11.38□□□□□ -0.59
CAST-228ENST00000509903 U3KPZ7 1027 aaPredicted RBP11.38□□□□□ -0.59
CAST-228ENST00000509903 CUX1P39880 1505 aa11.38□□□□□ -0.59
CAST-228ENST00000509903 ARXQ96QS3 562 aa11.37□□□□□ -0.59
CAST-228ENST00000509903 VPS8Q8N3P4 1428 aa11.37□□□□□ -0.59
CAST-228ENST00000509903 APLP2Q06481 763 aa11.35□□□□□ -0.59
CAST-228ENST00000509903 ERICH3Q5RHP9 1530 aa11.35□□□□□ -0.59
CAST-228ENST00000509903 RANGAP1P46060 587 aaPredicted RBP11.35□□□□□ -0.59
CAST-228ENST00000509903 KIF27Q86VH2 1401 aa11.34□□□□□ -0.59
CAST-228ENST00000509903 RGL2O15211 777 aa11.33□□□□□ -0.6
CAST-228ENST00000509903 PRDM2Q13029 1718 aa11.33□□□□□ -0.6
CAST-228ENST00000509903 PRXQ9BXM0 1461 aa11.33□□□□□ -0.6
CAST-228ENST00000509903 ECM2O94769 699 aaPredicted RBP11.31□□□□□ -0.6
CAST-228ENST00000509903 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.31□□□□□ -0.69e-7■■■□□ 17.3
CAST-228ENST00000509903 SAMD1Q6SPF0 538 aaPredicted RBP11.3□□□□□ -0.6
CAST-228ENST00000509903 CADPSQ9ULU8 1353 aa11.29□□□□□ -0.6
CAST-228ENST00000509903 CC2D2AQ9P2K1 1620 aa11.27□□□□□ -0.6
CAST-228ENST00000509903 DCAF8L1A6NGE4 600 aa11.27□□□□□ -0.6
CAST-228ENST00000509903 SPRYD3Q8NCJ5 442 aa11.27□□□□□ -0.6
CAST-228ENST00000509903 HNRNPUL2Q1KMD3 747 aaKnown RBP11.24□□□□□ -0.61
CAST-228ENST00000509903 CUX2O14529 1486 aa11.23□□□□□ -0.61
CAST-228ENST00000509903 ARAP1Q96P48 1450 aa11.23□□□□□ -0.61
CAST-228ENST00000509903 DNAJC5Q9H3Z4 198 aa11.22□□□□□ -0.61
CAST-228ENST00000509903 TMEM132AQ24JP5 1023 aa11.21□□□□□ -0.61
CAST-228ENST00000509903 NBR1Q14596 966 aa11.21□□□□□ -0.62
CAST-228ENST00000509903 FGD5Q6ZNL6 1462 aa11.2□□□□□ -0.62
CAST-228ENST00000509903 FANCD2Q9BXW9 1451 aa11.18□□□□□ -0.62
CAST-228ENST00000509903 IGF1RP08069 1367 aa11.18□□□□□ -0.62
CAST-228ENST00000509903 ARHGAP35Q9NRY4 1499 aa11.16□□□□□ -0.62
CAST-228ENST00000509903 KLHL34Q8N239 644 aa11.16□□□□□ -0.62
CAST-228ENST00000509903 CARMIL1Q5VZK9 1371 aa11.15□□□□□ -0.62
CAST-228ENST00000509903 CHGAP10645 457 aaKnown RBP11.14□□□□□ -0.63
CAST-228ENST00000509903 KANK4Q5T7N3 995 aaPredicted RBP11.13□□□□□ -0.63
CAST-228ENST00000509903 DIEXFQ68CQ4 756 aaKnown RBP11.13□□□□□ -0.63
CAST-228ENST00000509903 SPOCK2Q92563 424 aa11.13□□□□□ -0.63
CAST-228ENST00000509903 DNMBPQ6XZF7 1577 aa11.13□□□□□ -0.63
CAST-228ENST00000509903 HOMEZQ8IX15 550 aa11.13□□□□□ -0.63
CAST-228ENST00000509903 NESP48681 1621 aa11.1□□□□□ -0.63
CAST-228ENST00000509903 TOPBP1Q92547 1522 aa11.1□□□□□ -0.63
CAST-228ENST00000509903 ZNF316A6NFI3 1004 aaPredicted RBP11.09□□□□□ -0.63
CAST-228ENST00000509903 C14orf37Q86TY3 774 aa11.09□□□□□ -0.63
CAST-228ENST00000509903 POLA1P09884 1462 aaPredicted RBP11.08□□□□□ -0.64
CAST-228ENST00000509903 ABCA10Q8WWZ4 1543 aa11.08□□□□□ -0.64
CAST-228ENST00000509903 RRBP1Q9P2E9 1410 aaKnown RBP11.08□□□□□ -0.64
CAST-228ENST00000509903 RAD54L2Q9Y4B4 1467 aa11.08□□□□□ -0.64
CAST-228ENST00000509903 LAMC3Q9Y6N6 1575 aa11.06□□□□□ -0.64
CAST-228ENST00000509903 CCNB3Q8WWL7 1395 aa11.05□□□□□ -0.64
CAST-228ENST00000509903 FHAD1B1AJZ9 1412 aa11.05□□□□□ -0.64
CAST-228ENST00000509903 TIAM1Q13009 1591 aa11.04□□□□□ -0.64
CAST-228ENST00000509903 CLSPNQ9HAW4 1339 aa11.04□□□□□ -0.64
CAST-228ENST00000509903 MAP3K1Q13233 1512 aa11.04□□□□□ -0.64
CAST-228ENST00000509903 CUL7Q14999 1698 aa11.03□□□□□ -0.64
CAST-228ENST00000509903 DHX57Q6P158 1386 aaKnown RBP11.02□□□□□ -0.65
CAST-228ENST00000509903 URB2Q14146 1524 aaKnown RBP11.01□□□□□ -0.65
CAST-228ENST00000509903 PDS5BQ9NTI5 1447 aa11□□□□□ -0.65
CAST-228ENST00000509903 P3H3Q8IVL6 736 aa11□□□□□ -0.65
CAST-228ENST00000509903 EFCAB5A4FU69 1503 aa10.99□□□□□ -0.65
CAST-228ENST00000509903 ITGAEP38570 1179 aa10.99□□□□□ -0.65
CAST-228ENST00000509903 LRRC9Q6ZRR7 1453 aa10.99□□□□□ -0.65
CAST-228ENST00000509903 PCF11O94913 1555 aaKnown RBP10.99□□□□□ -0.65
CAST-228ENST00000509903 ATP1B4Q9UN42 357 aaPredicted RBP10.98□□□□□ -0.65
CAST-228ENST00000509903 WDR97A6NE52 1622 aa10.98□□□□□ -0.65
CAST-228ENST00000509903 FHOD3Q2V2M9 1422 aa10.98□□□□□ -0.65
CAST-228ENST00000509903 CTTNBP2Q8WZ74 1663 aa10.98□□□□□ -0.65
CAST-228ENST00000509903 CENPBP07199 599 aaPredicted RBP10.97□□□□□ -0.65
CAST-228ENST00000509903 CFAP43Q8NDM7 1665 aa10.97□□□□□ -0.65
CAST-228ENST00000509903 FYCO1Q9BQS8 1478 aa10.96□□□□□ -0.66
CAST-228ENST00000509903 ACIN1Q9UKV3 1341 aaKnown RBP10.95□□□□□ -0.66
CAST-228ENST00000509903 TDRD9Q8NDG6 1382 aaKnown RBP10.95□□□□□ -0.66
CAST-228ENST00000509903 ABCA5Q8WWZ7 1642 aa10.95□□□□□ -0.66
CAST-228ENST00000509903 GAPVD1Q14C86 1478 aa10.95□□□□□ -0.66
CAST-228ENST00000509903 NKX1-1Q15270 411 aaPredicted RBP10.94□□□□□ -0.66
CAST-228ENST00000509903 PHLDB1Q86UU1 1377 aa10.94□□□□□ -0.66
CAST-228ENST00000509903 CASKIN1Q8WXD9 1431 aa10.94□□□□□ -0.66
CAST-228ENST00000509903 FMN1Q68DA7 1419 aa10.93□□□□□ -0.66
CAST-228ENST00000509903 AQRO60306 1485 aaKnown RBP eCLIP10.93□□□□□ -0.662e-6■■■■□ 24.4
CAST-228ENST00000509903 KIF21AQ7Z4S6 1674 aa10.93□□□□□ -0.66
CAST-228ENST00000509903 POLA2Q14181 598 aa10.93□□□□□ -0.66
CAST-228ENST00000509903 NEUROD1Q13562 356 aa10.92□□□□□ -0.66
CAST-228ENST00000509903 FAM50AQ14320 339 aaKnown RBP10.92□□□□□ -0.66
CAST-228ENST00000509903 CIZ1Q9ULV3 898 aaPredicted RBP10.92□□□□□ -0.66
CAST-228ENST00000509903 RAB3GAP2Q9H2M9 1393 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms