RNA–Protein interactions for RNA: ENST00000509587.1

MBD4-207, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 3

Gene MBD4, Length 643 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-207ENST00000509587 RIMBP3CA6NJZ7 1639 aa28.94■■■□□ 2.22
MBD4-207ENST00000509587 RIMBP3BA6NNM3 1639 aa28.94■■■□□ 2.22
MBD4-207ENST00000509587 RIMBP3Q9UFD9 1639 aa28.94■■■□□ 2.22
MBD4-207ENST00000509587 JPH4Q96JJ6 628 aa28.93■■■□□ 2.22
MBD4-207ENST00000509587 SHROOM2Q13796 1616 aa28.93■■■□□ 2.22
MBD4-207ENST00000509587 KIF21BO75037 1637 aa28.85■■■□□ 2.21
MBD4-207ENST00000509587 PRG4Q92954 1404 aaPredicted RBP28.83■■■□□ 2.21
MBD4-207ENST00000509587 IQGAP2Q13576 1575 aa28.83■■■□□ 2.21
MBD4-207ENST00000509587 ERCC6L2Q5T890 1561 aa28.81■■■□□ 2.2
MBD4-207ENST00000509587 ARAP1Q96P48 1450 aa28.79■■■□□ 2.2
MBD4-207ENST00000509587 CTTNBP2Q8WZ74 1663 aa28.74■■■□□ 2.19
MBD4-207ENST00000509587 CYB5RLQ6IPT4 315 aa28.73■■■□□ 2.19
MBD4-207ENST00000509587 UGGT2Q9NYU1 1516 aa28.72■■■□□ 2.19
MBD4-207ENST00000509587 GOLGA3Q08378 1498 aa28.7■■■□□ 2.18
MBD4-207ENST00000509587 DISP1Q96F81 1524 aa28.65■■■□□ 2.18
MBD4-207ENST00000509587 CARMIL2Q6F5E8 1435 aa28.65■■■□□ 2.18
MBD4-207ENST00000509587 EHMT2Q96KQ7 1210 aa28.64■■■□□ 2.18
MBD4-207ENST00000509587 UBTFP17480 764 aaKnown RBP28.61■■■□□ 2.17
MBD4-207ENST00000509587 TNIKQ9UKE5 1360 aa28.56■■■□□ 2.16
MBD4-207ENST00000509587 KIAA0556O60303 1618 aa28.55■■■□□ 2.16
MBD4-207ENST00000509587 PTPRGP23470 1445 aa28.52■■■□□ 2.16
MBD4-207ENST00000509587 SAMD9Q5K651 1589 aa28.45■■■□□ 2.15
MBD4-207ENST00000509587 RANGAP1P46060 587 aaPredicted RBP28.44■■■□□ 2.14
MBD4-207ENST00000509587 TTBK1Q5TCY1 1321 aaPredicted RBP28.43■■■□□ 2.14
MBD4-207ENST00000509587 P3H3Q8IVL6 736 aa28.4■■■□□ 2.14
MBD4-207ENST00000509587 EFCAB5A4FU69 1503 aa28.38■■■□□ 2.13
MBD4-207ENST00000509587 UACAQ9BZF9 1416 aa28.34■■■□□ 2.13
MBD4-207ENST00000509587 ADCY10Q96PN6 1610 aa28.33■■■□□ 2.13
MBD4-207ENST00000509587 LOC105371045A0A1W2PR82 267 aa28.33■■■□□ 2.13
MBD4-207ENST00000509587 FHOD3Q2V2M9 1422 aa28.31■■■□□ 2.12
MBD4-207ENST00000509587 UHRF1BP1LA0JNW5 1464 aa28.31■■■□□ 2.12
MBD4-207ENST00000509587 ARHGAP35Q9NRY4 1499 aa28.3■■■□□ 2.12
MBD4-207ENST00000509587 PLB1Q6P1J6 1458 aa28.28■■■□□ 2.12
MBD4-207ENST00000509587 ABCC2Q92887 1545 aa28.27■■■□□ 2.12
MBD4-207ENST00000509587 ABCA8O94911 1581 aa28.25■■■□□ 2.11
MBD4-207ENST00000509587 NPM1P06748 294 aaKnown RBP eCLIP28.21■■■□□ 2.11
MBD4-207ENST00000509587 CLIP1P30622 1438 aa28.2■■■□□ 2.11
MBD4-207ENST00000509587 KDM5BQ9UGL1 1544 aa28.18■■■□□ 2.1
MBD4-207ENST00000509587 CEP162Q5TB80 1403 aa28.14■■■□□ 2.1
MBD4-207ENST00000509587 MAPKBP1O60336 1514 aa28.13■■■□□ 2.09
MBD4-207ENST00000509587 FMN1Q68DA7 1419 aa28.12■■■□□ 2.09
MBD4-207ENST00000509587 RAPGEF6Q8TEU7 1601 aa28.11■■■□□ 2.09
MBD4-207ENST00000509587 NUP153P49790 1475 aaKnown RBP28.07■■■□□ 2.08
MBD4-207ENST00000509587 ZCCHC11Q5TAX3 1644 aaKnown RBP28.06■■■□□ 2.08
MBD4-207ENST00000509587 ATP10BO94823 1461 aa28.04■■■□□ 2.08
MBD4-207ENST00000509587 ASXL2Q76L83 1435 aa28.02■■■□□ 2.08
MBD4-207ENST00000509587 TRHP20396 242 aaPredicted RBP28.02■■■□□ 2.08
MBD4-207ENST00000509587 ARID3CA6NKF2 412 aa28■■■□□ 2.07
MBD4-207ENST00000509587 ABCC10Q5T3U5 1492 aa27.97■■■□□ 2.07
MBD4-207ENST00000509587 CASKIN1Q8WXD9 1431 aa27.95■■■□□ 2.07
MBD4-207ENST00000509587 WDR7Q9Y4E6 1490 aa27.92■■■□□ 2.06
MBD4-207ENST00000509587 HECW1Q76N89 1606 aa27.92■■■□□ 2.06
MBD4-207ENST00000509587 DIP2BQ9P265 1576 aa27.9■■■□□ 2.06
MBD4-207ENST00000509587 ATP1B4Q9UN42 357 aaPredicted RBP27.9■■■□□ 2.06
MBD4-207ENST00000509587 PCF11O94913 1555 aaKnown RBP27.9■■■□□ 2.06
MBD4-207ENST00000509587 EPRSP07814 1512 aaKnown RBP27.89■■■□□ 2.06
MBD4-207ENST00000509587 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.89■■■□□ 2.06
MBD4-207ENST00000509587 FAM69CQ0P6D2 419 aa27.89■■■□□ 2.06
MBD4-207ENST00000509587 HNRNPUL2Q1KMD3 747 aaKnown RBP27.89■■■□□ 2.06
MBD4-207ENST00000509587 FYCO1Q9BQS8 1478 aa27.88■■■□□ 2.05
MBD4-207ENST00000509587 CDK13Q14004 1512 aaKnown RBP27.86■■■□□ 2.05
MBD4-207ENST00000509587 KIF13AQ9H1H9 1805 aa27.85■■■□□ 2.05
MBD4-207ENST00000509587 GLI2P10070 1586 aa27.82■■■□□ 2.04
MBD4-207ENST00000509587 PLEKHD1A6NEE1 506 aa27.81■■■□□ 2.04
MBD4-207ENST00000509587 KCNH8Q96L42 1107 aa27.8■■■□□ 2.04
MBD4-207ENST00000509587 VPS8Q8N3P4 1428 aa27.79■■■□□ 2.04
MBD4-207ENST00000509587 CCDC18Q5T9S5 1454 aa27.78■■■□□ 2.04
MBD4-207ENST00000509587 LRRIQ1Q96JM4 1722 aa27.78■■■□□ 2.04
MBD4-207ENST00000509587 CDK11AQ9UQ88 783 aaPredicted RBP27.74■■■□□ 2.03
MBD4-207ENST00000509587 MAP3K4Q9Y6R4 1608 aa27.68■■■□□ 2.02
MBD4-207ENST00000509587 TROQ12816 1431 aaPredicted RBP27.67■■■□□ 2.02
MBD4-207ENST00000509587 ABCA9Q8IUA7 1624 aa27.64■■■□□ 2.02
MBD4-207ENST00000509587 CD109Q6YHK3 1445 aa27.64■■■□□ 2.02
MBD4-207ENST00000509587 MAGI3Q5TCQ9 1506 aa27.63■■■□□ 2.01
MBD4-207ENST00000509587 CFAP43Q8NDM7 1665 aa27.62■■■□□ 2.01
MBD4-207ENST00000509587 PPRC1Q5VV67 1664 aaKnown RBP27.59■■■□□ 2.01
MBD4-207ENST00000509587 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.59■■■□□ 2.012e-7■■■□□ 19.1
MBD4-207ENST00000509587 TSPOAP1O95153 1857 aa27.57■■■□□ 2
MBD4-207ENST00000509587 KIF14Q15058 1648 aa27.55■■■□□ 2
MBD4-207ENST00000509587 TEX14Q8IWB6 1497 aa27.54■■■□□ 2
MBD4-207ENST00000509587 TIAM1Q13009 1591 aa27.53■■■□□ 2
MBD4-207ENST00000509587 TTC37Q6PGP7 1564 aa27.53■■■□□ 2
MBD4-207ENST00000509587 MAP3K1Q13233 1512 aa27.53■■■□□ 2
MBD4-207ENST00000509587 MTUS2Q5JR59 1369 aa27.52■■■□□ 2
MBD4-207ENST00000509587 EHBP1L1Q8N3D4 1523 aa27.46■■□□□ 1.99
MBD4-207ENST00000509587 PLCH2O75038 1416 aa27.46■■□□□ 1.99
MBD4-207ENST00000509587 LRRC9Q6ZRR7 1453 aa27.44■■□□□ 1.98
MBD4-207ENST00000509587 APLP2Q06481 763 aa27.43■■□□□ 1.98
MBD4-207ENST00000509587 KANK4Q5T7N3 995 aaPredicted RBP27.43■■□□□ 1.98
MBD4-207ENST00000509587 PHLDB1Q86UU1 1377 aa27.41■■□□□ 1.98
MBD4-207ENST00000509587 NEO1Q92859 1461 aa27.4■■□□□ 1.98
MBD4-207ENST00000509587 ARAP3Q8WWN8 1544 aa27.4■■□□□ 1.98
MBD4-207ENST00000509587 COL17A1Q9UMD9 1497 aaPredicted RBP27.39■■□□□ 1.98
MBD4-207ENST00000509587 FANCAO15360 1455 aa27.38■■□□□ 1.97
MBD4-207ENST00000509587 MYO5CQ9NQX4 1742 aa27.36■■□□□ 1.97
MBD4-207ENST00000509587 KDM6BO15054 1643 aa27.36■■□□□ 1.97
MBD4-207ENST00000509587 GPATCH8Q9UKJ3 1502 aaKnown RBP27.35■■□□□ 1.97
MBD4-207ENST00000509587 EFCAB2Q5VUJ9 269 aa27.34■■□□□ 1.97
MBD4-207ENST00000509587 NCOA2Q15596 1464 aa27.33■■□□□ 1.97
MBD4-207ENST00000509587 AKNAQ7Z591 1439 aa27.33■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms