RNA–Protein interactions for RNA: ENST00000509549.5

C22orf39-204, Transcript of chromosome 22 open reading frame 39, humanhuman

TSL 2

Gene C22orf39, Length 2,979 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C22orf39-204ENST00000509549 ERICH3Q5RHP9 1530 aa19.08■□□□□ 0.64
C22orf39-204ENST00000509549 ABCA5Q8WWZ7 1642 aa19.07■□□□□ 0.64
C22orf39-204ENST00000509549 GRIN2BQ13224 1484 aa19.03■□□□□ 0.64
C22orf39-204ENST00000509549 CHMP7Q8WUX9 453 aaPredicted RBP19.02■□□□□ 0.64
C22orf39-204ENST00000509549 EIF4G3O43432 1585 aaKnown RBP18.98■□□□□ 0.63
C22orf39-204ENST00000509549 SNAPC4Q5SXM2 1469 aa18.97■□□□□ 0.63
C22orf39-204ENST00000509549 ATP1B4Q9UN42 357 aaPredicted RBP18.96■□□□□ 0.63
C22orf39-204ENST00000509549 CUL7Q14999 1698 aa18.96■□□□□ 0.63
C22orf39-204ENST00000509549 PBRM1Q86U86 1689 aa18.96■□□□□ 0.63
C22orf39-204ENST00000509549 FHAD1B1AJZ9 1412 aa18.95■□□□□ 0.62
C22orf39-204ENST00000509549 ARAP1Q96P48 1450 aa18.87■□□□□ 0.61
C22orf39-204ENST00000509549 ARHGAP35Q9NRY4 1499 aa18.87■□□□□ 0.61
C22orf39-204ENST00000509549 ADAMTS12P58397 1594 aa18.86■□□□□ 0.61
C22orf39-204ENST00000509549 VPS8Q8N3P4 1428 aa18.84■□□□□ 0.61
C22orf39-204ENST00000509549 FHOD3Q2V2M9 1422 aa18.82■□□□□ 0.6
C22orf39-204ENST00000509549 TRIM26Q12899 539 aaPredicted RBP18.81■□□□□ 0.6
C22orf39-204ENST00000509549 MAGI1Q96QZ7 1491 aaPredicted RBP18.81■□□□□ 0.6
C22orf39-204ENST00000509549 GRIN2AQ12879 1464 aa18.8■□□□□ 0.6
C22orf39-204ENST00000509549 SYNJ2O15056 1496 aa18.79■□□□□ 0.6
C22orf39-204ENST00000509549 ARID3CA6NKF2 412 aa18.77■□□□□ 0.59
C22orf39-204ENST00000509549 CTTNBP2Q8WZ74 1663 aa18.76■□□□□ 0.59
C22orf39-204ENST00000509549 KANK4Q5T7N3 995 aaPredicted RBP18.72■□□□□ 0.59
C22orf39-204ENST00000509549 JPH4Q96JJ6 628 aa18.72■□□□□ 0.59
C22orf39-204ENST00000509549 IQGAP2Q13576 1575 aa18.7■□□□□ 0.58
C22orf39-204ENST00000509549 KIAA0586Q9BVV6 1533 aa18.69■□□□□ 0.58
C22orf39-204ENST00000509549 CEP170Q5SW79 1584 aa18.66■□□□□ 0.58
C22orf39-204ENST00000509549 BCL11AQ9H165 835 aa18.63■□□□□ 0.57
C22orf39-204ENST00000509549 EFCAB5A4FU69 1503 aa18.62■□□□□ 0.57
C22orf39-204ENST00000509549 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.61■□□□□ 0.57
C22orf39-204ENST00000509549 HNRNPUL2Q1KMD3 747 aaKnown RBP18.61■□□□□ 0.57
C22orf39-204ENST00000509549 NUP160Q12769 1436 aa18.61■□□□□ 0.57
C22orf39-204ENST00000509549 CHD1O14646 1710 aa18.6■□□□□ 0.57
C22orf39-204ENST00000509549 FMN1Q68DA7 1419 aa18.59■□□□□ 0.57
C22orf39-204ENST00000509549 SAMD9Q5K651 1589 aa18.55■□□□□ 0.56
C22orf39-204ENST00000509549 PCF11O94913 1555 aaKnown RBP18.55■□□□□ 0.56
C22orf39-204ENST00000509549 DISP1Q96F81 1524 aa18.54■□□□□ 0.56
C22orf39-204ENST00000509549 UGGT2Q9NYU1 1516 aa18.54■□□□□ 0.56
C22orf39-204ENST00000509549 PRG4Q92954 1404 aaPredicted RBP18.53■□□□□ 0.56
C22orf39-204ENST00000509549 CARMIL2Q6F5E8 1435 aa18.52■□□□□ 0.56
C22orf39-204ENST00000509549 CASKIN1Q8WXD9 1431 aa18.51■□□□□ 0.55
C22orf39-204ENST00000509549 EIF5BO60841 1220 aaKnown RBP18.49■□□□□ 0.55
C22orf39-204ENST00000509549 ITGAEP38570 1179 aa18.49■□□□□ 0.55
C22orf39-204ENST00000509549 KIAA0556O60303 1618 aa18.48■□□□□ 0.55
C22orf39-204ENST00000509549 OSCARQ8IYS5 282 aa18.48■□□□□ 0.55
C22orf39-204ENST00000509549 FYCO1Q9BQS8 1478 aa18.46■□□□□ 0.55
C22orf39-204ENST00000509549 MTUS2Q5JR59 1369 aa18.46■□□□□ 0.55
C22orf39-204ENST00000509549 TIAM1Q13009 1591 aa18.44■□□□□ 0.54
C22orf39-204ENST00000509549 PLB1Q6P1J6 1458 aa18.44■□□□□ 0.54
C22orf39-204ENST00000509549 PTPRGP23470 1445 aa18.43■□□□□ 0.54
C22orf39-204ENST00000509549 LRRC9Q6ZRR7 1453 aa18.42■□□□□ 0.54
C22orf39-204ENST00000509549 FAM50AQ14320 339 aaKnown RBP18.4■□□□□ 0.54
C22orf39-204ENST00000509549 CDK13Q14004 1512 aaKnown RBP18.4■□□□□ 0.54
C22orf39-204ENST00000509549 ERCC6L2Q5T890 1561 aa18.39■□□□□ 0.53
C22orf39-204ENST00000509549 NCBP3Q53F19 620 aaKnown RBP18.36■□□□□ 0.53
C22orf39-204ENST00000509549 EPRSP07814 1512 aaKnown RBP18.36■□□□□ 0.53
C22orf39-204ENST00000509549 PHLDB1Q86UU1 1377 aa18.35■□□□□ 0.53
C22orf39-204ENST00000509549 LRRIQ1Q96JM4 1722 aa18.33■□□□□ 0.53
C22orf39-204ENST00000509549 CDK11AQ9UQ88 783 aaPredicted RBP18.33■□□□□ 0.52
C22orf39-204ENST00000509549 SCAF1Q9H7N4 1312 aaKnown RBP18.33■□□□□ 0.52
C22orf39-204ENST00000509549 NUP153P49790 1475 aaKnown RBP18.33■□□□□ 0.52
C22orf39-204ENST00000509549 MAP3K1Q13233 1512 aa18.32■□□□□ 0.52
C22orf39-204ENST00000509549 HECW1Q76N89 1606 aa18.32■□□□□ 0.52
C22orf39-204ENST00000509549 RAPGEF6Q8TEU7 1601 aa18.3■□□□□ 0.52
C22orf39-204ENST00000509549 CLASP1Q7Z460 1538 aa18.29■□□□□ 0.52
C22orf39-204ENST00000509549 CFAP43Q8NDM7 1665 aa18.29■□□□□ 0.52
C22orf39-204ENST00000509549 CCNB3Q8WWL7 1395 aa18.29■□□□□ 0.52
C22orf39-204ENST00000509549 PLEKHD1A6NEE1 506 aa18.29■□□□□ 0.52
C22orf39-204ENST00000509549 PLPPR3Q6T4P5 718 aa18.28■□□□□ 0.52
C22orf39-204ENST00000509549 CCDC18Q5T9S5 1454 aa18.28■□□□□ 0.52
C22orf39-204ENST00000509549 MAGI3Q5TCQ9 1506 aa18.27■□□□□ 0.52
C22orf39-204ENST00000509549 KCNH8Q96L42 1107 aa18.26■□□□□ 0.51
C22orf39-204ENST00000509549 SHROOM2Q13796 1616 aa18.25■□□□□ 0.51
C22orf39-204ENST00000509549 CCER1Q8TC90 406 aaPredicted RBP18.24■□□□□ 0.51
C22orf39-204ENST00000509549 NCOA2Q15596 1464 aa18.24■□□□□ 0.51
C22orf39-204ENST00000509549 UACAQ9BZF9 1416 aa18.23■□□□□ 0.51
C22orf39-204ENST00000509549 ZNF777Q9ULD5 760 aaPredicted RBP18.22■□□□□ 0.51
C22orf39-204ENST00000509549 ATP10BO94823 1461 aa18.22■□□□□ 0.51
C22orf39-204ENST00000509549 ZEB1P37275 1124 aaPredicted RBP18.22■□□□□ 0.51
C22orf39-204ENST00000509549 RRBP1Q9P2E9 1410 aaKnown RBP18.2■□□□□ 0.5
C22orf39-204ENST00000509549 ABCA8O94911 1581 aa18.19■□□□□ 0.5
C22orf39-204ENST00000509549 EHBP1L1Q8N3D4 1523 aa18.18■□□□□ 0.5
C22orf39-204ENST00000509549 CYB5RLQ6IPT4 315 aa18.17■□□□□ 0.5
C22orf39-204ENST00000509549 PLEKHG5O94827 1062 aa18.16■□□□□ 0.5
C22orf39-204ENST00000509549 CHIC2Q9UKJ5 165 aa18.16■□□□□ 0.5
C22orf39-204ENST00000509549 ZNF644Q9H582 1327 aaPredicted RBP18.16■□□□□ 0.5
C22orf39-204ENST00000509549 SUPT6HQ7KZ85 1726 aaKnown RBP18.15■□□□□ 0.5
C22orf39-204ENST00000509549 FGD6Q6ZV73 1430 aa18.15■□□□□ 0.5
C22orf39-204ENST00000509549 TROQ12816 1431 aaPredicted RBP18.14■□□□□ 0.49
C22orf39-204ENST00000509549 MYOM3Q5VTT5 1437 aa18.14■□□□□ 0.49
C22orf39-204ENST00000509549 RTN4Q9NQC3 1192 aaKnown RBP18.14■□□□□ 0.49
C22orf39-204ENST00000509549 CFDP1Q9UEE9 299 aaPredicted RBP18.14■□□□□ 0.49
C22orf39-204ENST00000509549 NPM1P06748 294 aaKnown RBP eCLIP18.1■□□□□ 0.49
C22orf39-204ENST00000509549 ABCC2Q92887 1545 aa18.09■□□□□ 0.49
C22orf39-204ENST00000509549 KIF14Q15058 1648 aa18.07■□□□□ 0.48
C22orf39-204ENST00000509549 RRP7BPQ9NSQ0 103 aa18.06■□□□□ 0.48
C22orf39-204ENST00000509549 ARHGEF11O15085 1522 aa18.05■□□□□ 0.48
C22orf39-204ENST00000509549 PTPN23Q9H3S7 1636 aa18■□□□□ 0.47
C22orf39-204ENST00000509549 PTPRKQ15262 1439 aa18■□□□□ 0.47
C22orf39-204ENST00000509549 GPATCH8Q9UKJ3 1502 aaKnown RBP18■□□□□ 0.47
C22orf39-204ENST00000509549 HNRNPMP52272 730 aaKnown RBP eCLIP17.99■□□□□ 0.476e-7■■■□□ 17.8
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms