RNA–Protein interactions for RNA: ENST00000509142.5

SEC31A-228, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SEC31A, Length 3,861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-228ENST00000509142 DHX57Q6P158 1386 aaKnown RBP16.11■□□□□ 0.17
SEC31A-228ENST00000509142 FHAD1B1AJZ9 1412 aa16.1■□□□□ 0.17
SEC31A-228ENST00000509142 PDS5BQ9NTI5 1447 aa16.1■□□□□ 0.17
SEC31A-228ENST00000509142 RRBP1Q9P2E9 1410 aaKnown RBP16.1■□□□□ 0.17
SEC31A-228ENST00000509142 DNAJC5BQ9UF47 199 aa16.09■□□□□ 0.17
SEC31A-228ENST00000509142 LAMC3Q9Y6N6 1575 aa16.09■□□□□ 0.17
SEC31A-228ENST00000509142 TDRD9Q8NDG6 1382 aaKnown RBP16.08■□□□□ 0.16
SEC31A-228ENST00000509142 FAM50AQ14320 339 aaKnown RBP16.07■□□□□ 0.16
SEC31A-228ENST00000509142 CLSPNQ9HAW4 1339 aa16.07■□□□□ 0.16
SEC31A-228ENST00000509142 URB2Q14146 1524 aaKnown RBP16.05■□□□□ 0.16
SEC31A-228ENST00000509142 FHOD3Q2V2M9 1422 aa16.04■□□□□ 0.16
SEC31A-228ENST00000509142 TIAM1Q13009 1591 aa16.03■□□□□ 0.16
SEC31A-228ENST00000509142 LRRC9Q6ZRR7 1453 aa16.01■□□□□ 0.15
SEC31A-228ENST00000509142 MAP3K1Q13233 1512 aa16■□□□□ 0.15
SEC31A-228ENST00000509142 CUL7Q14999 1698 aa15.99■□□□□ 0.15
SEC31A-228ENST00000509142 GAPVD1Q14C86 1478 aa15.98■□□□□ 0.15
SEC31A-228ENST00000509142 PHLDB1Q86UU1 1377 aa15.96■□□□□ 0.15
SEC31A-228ENST00000509142 EFCAB5A4FU69 1503 aa15.95■□□□□ 0.14
SEC31A-228ENST00000509142 PCF11O94913 1555 aaKnown RBP15.95■□□□□ 0.14
SEC31A-228ENST00000509142 FMN1Q68DA7 1419 aa15.94■□□□□ 0.14
SEC31A-228ENST00000509142 RAB3GAP2Q9H2M9 1393 aa15.94■□□□□ 0.14
SEC31A-228ENST00000509142 CASKIN1Q8WXD9 1431 aa15.92■□□□□ 0.14
SEC31A-228ENST00000509142 FYCO1Q9BQS8 1478 aa15.92■□□□□ 0.14
SEC31A-228ENST00000509142 MTUS2Q5JR59 1369 aa15.91■□□□□ 0.14
SEC31A-228ENST00000509142 SETD5Q9C0A6 1442 aa15.9■□□□□ 0.14
SEC31A-228ENST00000509142 CTTNBP2Q8WZ74 1663 aa15.89■□□□□ 0.13
SEC31A-228ENST00000509142 KIF21AQ7Z4S6 1674 aa15.88■□□□□ 0.13
SEC31A-228ENST00000509142 AQRO60306 1485 aaKnown RBP eCLIP15.87■□□□□ 0.137e-7■■■■□ 21.1
SEC31A-228ENST00000509142 MAPKBP1O60336 1514 aa15.87■□□□□ 0.13
SEC31A-228ENST00000509142 ABCA5Q8WWZ7 1642 aa15.86■□□□□ 0.13
SEC31A-228ENST00000509142 WDR97A6NE52 1622 aa15.86■□□□□ 0.13
SEC31A-228ENST00000509142 CFAP43Q8NDM7 1665 aa15.85■□□□□ 0.13
SEC31A-228ENST00000509142 MRC2Q9UBG0 1479 aa15.8■□□□□ 0.12
SEC31A-228ENST00000509142 SIN3AQ96ST3 1273 aa15.78■□□□□ 0.12
SEC31A-228ENST00000509142 SNAPC4Q5SXM2 1469 aa15.78■□□□□ 0.12
SEC31A-228ENST00000509142 TARBP1Q13395 1621 aaKnown RBP15.78■□□□□ 0.12
SEC31A-228ENST00000509142 FGD6Q6ZV73 1430 aa15.77■□□□□ 0.12
SEC31A-228ENST00000509142 ARID3CA6NKF2 412 aa15.77■□□□□ 0.11
SEC31A-228ENST00000509142 KCNH8Q96L42 1107 aa15.76■□□□□ 0.11
SEC31A-228ENST00000509142 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.75■□□□□ 0.11
SEC31A-228ENST00000509142 SAMD9Q5K651 1589 aa15.75■□□□□ 0.11
SEC31A-228ENST00000509142 GRIN2BQ13224 1484 aa15.74■□□□□ 0.11
SEC31A-228ENST00000509142 NCOA2Q15596 1464 aa15.72■□□□□ 0.11
SEC31A-228ENST00000509142 MYOM3Q5VTT5 1437 aa15.7■□□□□ 0.1
SEC31A-228ENST00000509142 IFT140Q96RY7 1462 aa15.69■□□□□ 0.1
SEC31A-228ENST00000509142 ERCC6Q03468 1493 aa15.69■□□□□ 0.1
SEC31A-228ENST00000509142 PBRM1Q86U86 1689 aa15.69■□□□□ 0.1
SEC31A-228ENST00000509142 IQGAP2Q13576 1575 aa15.69■□□□□ 0.1
SEC31A-228ENST00000509142 CHIC2Q9UKJ5 165 aa15.68■□□□□ 0.1
SEC31A-228ENST00000509142 ZNF608Q9ULD9 1512 aaPredicted RBP15.67■□□□□ 0.1
SEC31A-228ENST00000509142 FBLN2P98095 1184 aa15.67■□□□□ 0.1
SEC31A-228ENST00000509142 CCDC18Q5T9S5 1454 aa15.67■□□□□ 0.1
SEC31A-228ENST00000509142 TIMELESSQ9UNS1 1208 aa15.67■□□□□ 0.1
SEC31A-228ENST00000509142 SUPT16HQ9Y5B9 1047 aaKnown RBP15.67■□□□□ 0.1
SEC31A-228ENST00000509142 EHBP1L1Q8N3D4 1523 aa15.66■□□□□ 0.1
SEC31A-228ENST00000509142 ADAMTS12P58397 1594 aa15.66■□□□□ 0.1
SEC31A-228ENST00000509142 THOC2Q8NI27 1593 aaKnown RBP15.66■□□□□ 0.1
SEC31A-228ENST00000509142 RRP7BPQ9NSQ0 103 aa15.65■□□□□ 0.1
SEC31A-228ENST00000509142 SUPT6HQ7KZ85 1726 aaKnown RBP15.65■□□□□ 0.1
SEC31A-228ENST00000509142 CHMP7Q8WUX9 453 aaPredicted RBP15.65■□□□□ 0.1
SEC31A-228ENST00000509142 TRIM52Q96A61 297 aa15.63■□□□□ 0.09
SEC31A-228ENST00000509142 TONSLQ96HA7 1378 aa15.63■□□□□ 0.09
SEC31A-228ENST00000509142 PTPRKQ15262 1439 aa15.62■□□□□ 0.09
SEC31A-228ENST00000509142 HECW1Q76N89 1606 aa15.62■□□□□ 0.09
SEC31A-228ENST00000509142 HFM1A2PYH4 1435 aa15.62■□□□□ 0.09
SEC31A-228ENST00000509142 EPRSP07814 1512 aaKnown RBP15.61■□□□□ 0.09
SEC31A-228ENST00000509142 CDK11AQ9UQ88 783 aaPredicted RBP15.61■□□□□ 0.09
SEC31A-228ENST00000509142 PPP1R15AO75807 674 aaPredicted RBP15.6■□□□□ 0.09
SEC31A-228ENST00000509142 LRRIQ1Q96JM4 1722 aa15.6■□□□□ 0.09
SEC31A-228ENST00000509142 HIRIP3Q9BW71 556 aaPredicted RBP15.6■□□□□ 0.09
SEC31A-228ENST00000509142 WDR62O43379 1518 aa15.6■□□□□ 0.09
SEC31A-228ENST00000509142 DDX10Q13206 875 aaKnown RBP15.59■□□□□ 0.09
SEC31A-228ENST00000509142 UACAQ9BZF9 1416 aa15.59■□□□□ 0.09
SEC31A-228ENST00000509142 KIAA0586Q9BVV6 1533 aa15.58■□□□□ 0.09
SEC31A-228ENST00000509142 CDK13Q14004 1512 aaKnown RBP15.58■□□□□ 0.08
SEC31A-228ENST00000509142 UGGT2Q9NYU1 1516 aa15.58■□□□□ 0.08
SEC31A-228ENST00000509142 NAIPQ13075 1403 aa15.58■□□□□ 0.08
SEC31A-228ENST00000509142 PTPN23Q9H3S7 1636 aa15.57■□□□□ 0.08
SEC31A-228ENST00000509142 MAGI3Q5TCQ9 1506 aa15.57■□□□□ 0.08
SEC31A-228ENST00000509142 GRIN2AQ12879 1464 aa15.54■□□□□ 0.08
SEC31A-228ENST00000509142 MIA2Q96PC5 1412 aa15.51■□□□□ 0.07
SEC31A-228ENST00000509142 EIF4G3O43432 1585 aaKnown RBP15.51■□□□□ 0.07
SEC31A-228ENST00000509142 ARHGEF11O15085 1522 aa15.51■□□□□ 0.07
SEC31A-228ENST00000509142 DISP1Q96F81 1524 aa15.49■□□□□ 0.07
SEC31A-228ENST00000509142 TCOF1Q13428 1488 aaKnown RBP15.49■□□□□ 0.07
SEC31A-228ENST00000509142 KIAA0556O60303 1618 aa15.48■□□□□ 0.07
SEC31A-228ENST00000509142 JPH4Q96JJ6 628 aa15.48■□□□□ 0.07
SEC31A-228ENST00000509142 MAGI1Q96QZ7 1491 aaPredicted RBP15.48■□□□□ 0.07
SEC31A-228ENST00000509142 ZNF777Q9ULD5 760 aaPredicted RBP15.47■□□□□ 0.07
SEC31A-228ENST00000509142 CARMIL2Q6F5E8 1435 aa15.46■□□□□ 0.07
SEC31A-228ENST00000509142 CFDP1Q9UEE9 299 aaPredicted RBP15.46■□□□□ 0.07
SEC31A-228ENST00000509142 SYNJ2O15056 1496 aa15.46■□□□□ 0.07
SEC31A-228ENST00000509142 KDM5BQ9UGL1 1544 aa15.46■□□□□ 0.07
SEC31A-228ENST00000509142 MPHOSPH9Q99550 1183 aa15.46■□□□□ 0.07
SEC31A-228ENST00000509142 ZNF644Q9H582 1327 aaPredicted RBP15.46■□□□□ 0.06
SEC31A-228ENST00000509142 NUP153P49790 1475 aaKnown RBP15.45■□□□□ 0.06
SEC31A-228ENST00000509142 ANP32CO43423 234 aa15.44■□□□□ 0.06
SEC31A-228ENST00000509142 TSHZ2Q9NRE2 1034 aa15.44■□□□□ 0.06
SEC31A-228ENST00000509142 RAPGEF6Q8TEU7 1601 aa15.43■□□□□ 0.06
SEC31A-228ENST00000509142 FOXD1Q16676 465 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms