RNA–Protein interactions for RNA: ENST00000508171.5

LIN54-207, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 2,684 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-207ENST00000508171 YTHDC1Q96MU7 727 aaKnown RBP16.07■□□□□ 0.16
LIN54-207ENST00000508171 ABCA10Q8WWZ4 1543 aa16.07■□□□□ 0.16
LIN54-207ENST00000508171 ATP1B4Q9UN42 357 aaPredicted RBP16.06■□□□□ 0.16
LIN54-207ENST00000508171 MAP3K1Q13233 1512 aa16.05■□□□□ 0.16
LIN54-207ENST00000508171 LRRC9Q6ZRR7 1453 aa16.04■□□□□ 0.16
LIN54-207ENST00000508171 PHLDB1Q86UU1 1377 aa16.02■□□□□ 0.15
LIN54-207ENST00000508171 DNAJC5BQ9UF47 199 aa16.02■□□□□ 0.15
LIN54-207ENST00000508171 FHAD1B1AJZ9 1412 aa16.01■□□□□ 0.15
LIN54-207ENST00000508171 FHOD3Q2V2M9 1422 aa16.01■□□□□ 0.15
LIN54-207ENST00000508171 PCF11O94913 1555 aaKnown RBP16.01■□□□□ 0.15
LIN54-207ENST00000508171 RAB3GAP2Q9H2M9 1393 aa16■□□□□ 0.15
LIN54-207ENST00000508171 URB2Q14146 1524 aaKnown RBP15.99■□□□□ 0.15
LIN54-207ENST00000508171 FAM50AQ14320 339 aaKnown RBP15.98■□□□□ 0.15
LIN54-207ENST00000508171 TDRD9Q8NDG6 1382 aaKnown RBP15.96■□□□□ 0.15
LIN54-207ENST00000508171 LAMC3Q9Y6N6 1575 aa15.96■□□□□ 0.15
LIN54-207ENST00000508171 CUL7Q14999 1698 aa15.96■□□□□ 0.14
LIN54-207ENST00000508171 CFAP43Q8NDM7 1665 aa15.96■□□□□ 0.14
LIN54-207ENST00000508171 CTTNBP2Q8WZ74 1663 aa15.94■□□□□ 0.14
LIN54-207ENST00000508171 SETD5Q9C0A6 1442 aa15.93■□□□□ 0.14
LIN54-207ENST00000508171 WDR97A6NE52 1622 aa15.92■□□□□ 0.14
LIN54-207ENST00000508171 EFCAB5A4FU69 1503 aa15.91■□□□□ 0.14
LIN54-207ENST00000508171 MAPKBP1O60336 1514 aa15.91■□□□□ 0.14
LIN54-207ENST00000508171 CASKIN1Q8WXD9 1431 aa15.91■□□□□ 0.14
LIN54-207ENST00000508171 FYCO1Q9BQS8 1478 aa15.9■□□□□ 0.14
LIN54-207ENST00000508171 GAPVD1Q14C86 1478 aa15.87■□□□□ 0.13
LIN54-207ENST00000508171 ABCA5Q8WWZ7 1642 aa15.87■□□□□ 0.13
LIN54-207ENST00000508171 PDS5BQ9NTI5 1447 aa15.87■□□□□ 0.13
LIN54-207ENST00000508171 AQRO60306 1485 aaKnown RBP eCLIP15.87■□□□□ 0.13
LIN54-207ENST00000508171 KIF21AQ7Z4S6 1674 aa15.86■□□□□ 0.13
LIN54-207ENST00000508171 SIN3AQ96ST3 1273 aa15.86■□□□□ 0.13
LIN54-207ENST00000508171 FMN1Q68DA7 1419 aa15.85■□□□□ 0.13
LIN54-207ENST00000508171 SNAPC4Q5SXM2 1469 aa15.83■□□□□ 0.13
LIN54-207ENST00000508171 PELP1Q8IZL8 1130 aaKnown RBP15.82■□□□□ 0.12
LIN54-207ENST00000508171 LRRIQ1Q96JM4 1722 aa15.81■□□□□ 0.12
LIN54-207ENST00000508171 SAMD9Q5K651 1589 aa15.8■□□□□ 0.12
LIN54-207ENST00000508171 MTUS2Q5JR59 1369 aa15.79■□□□□ 0.12
LIN54-207ENST00000508171 FGD6Q6ZV73 1430 aa15.78■□□□□ 0.12
LIN54-207ENST00000508171 TARBP1Q13395 1621 aaKnown RBP15.77■□□□□ 0.12
LIN54-207ENST00000508171 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.77■□□□□ 0.12
LIN54-207ENST00000508171 GRIN2BQ13224 1484 aa15.74■□□□□ 0.11
LIN54-207ENST00000508171 PTPRKQ15262 1439 aa15.74■□□□□ 0.11
LIN54-207ENST00000508171 NCOA2Q15596 1464 aa15.72■□□□□ 0.11
LIN54-207ENST00000508171 PBRM1Q86U86 1689 aa15.69■□□□□ 0.1
LIN54-207ENST00000508171 MYOM3Q5VTT5 1437 aa15.69■□□□□ 0.1
LIN54-207ENST00000508171 KCNH8Q96L42 1107 aa15.68■□□□□ 0.1
LIN54-207ENST00000508171 HIRIP3Q9BW71 556 aaPredicted RBP15.68■□□□□ 0.1
LIN54-207ENST00000508171 PPP1R15AO75807 674 aaPredicted RBP15.68■□□□□ 0.1
LIN54-207ENST00000508171 MAGI3Q5TCQ9 1506 aa15.67■□□□□ 0.1
LIN54-207ENST00000508171 SUPT6HQ7KZ85 1726 aaKnown RBP15.67■□□□□ 0.1
LIN54-207ENST00000508171 CCDC18Q5T9S5 1454 aa15.67■□□□□ 0.1
LIN54-207ENST00000508171 DDX10Q13206 875 aaKnown RBP15.67■□□□□ 0.1
LIN54-207ENST00000508171 TIMELESSQ9UNS1 1208 aa15.67■□□□□ 0.1
LIN54-207ENST00000508171 HFM1A2PYH4 1435 aa15.66■□□□□ 0.1
LIN54-207ENST00000508171 THOC2Q8NI27 1593 aaKnown RBP15.65■□□□□ 0.1
LIN54-207ENST00000508171 PTPN23Q9H3S7 1636 aa15.64■□□□□ 0.09
LIN54-207ENST00000508171 EHBP1L1Q8N3D4 1523 aa15.64■□□□□ 0.09
LIN54-207ENST00000508171 ARID3CA6NKF2 412 aa15.64■□□□□ 0.09
LIN54-207ENST00000508171 NAIPQ13075 1403 aa15.63■□□□□ 0.09
LIN54-207ENST00000508171 IQGAP2Q13576 1575 aa15.63■□□□□ 0.09
LIN54-207ENST00000508171 UGGT2Q9NYU1 1516 aa15.62■□□□□ 0.09
LIN54-207ENST00000508171 MRC2Q9UBG0 1479 aa15.62■□□□□ 0.09
LIN54-207ENST00000508171 UACAQ9BZF9 1416 aa15.62■□□□□ 0.09
LIN54-207ENST00000508171 ADAMTS12P58397 1594 aa15.62■□□□□ 0.09
LIN54-207ENST00000508171 CHIC2Q9UKJ5 165 aa15.61■□□□□ 0.09
LIN54-207ENST00000508171 RRP7BPQ9NSQ0 103 aa15.61■□□□□ 0.09
LIN54-207ENST00000508171 ARHGEF11O15085 1522 aa15.6■□□□□ 0.09
LIN54-207ENST00000508171 ZNF608Q9ULD9 1512 aaPredicted RBP15.6■□□□□ 0.09
LIN54-207ENST00000508171 EPRSP07814 1512 aaKnown RBP15.59■□□□□ 0.09
LIN54-207ENST00000508171 TONSLQ96HA7 1378 aa15.58■□□□□ 0.09
LIN54-207ENST00000508171 CDK13Q14004 1512 aaKnown RBP15.58■□□□□ 0.08
LIN54-207ENST00000508171 HECW1Q76N89 1606 aa15.58■□□□□ 0.08
LIN54-207ENST00000508171 WDR62O43379 1518 aa15.53■□□□□ 0.08
LIN54-207ENST00000508171 TCOF1Q13428 1488 aaKnown RBP15.53■□□□□ 0.08
LIN54-207ENST00000508171 IFT140Q96RY7 1462 aa15.52■□□□□ 0.07
LIN54-207ENST00000508171 TRIM52Q96A61 297 aa15.51■□□□□ 0.07
LIN54-207ENST00000508171 SUPT16HQ9Y5B9 1047 aaKnown RBP15.51■□□□□ 0.07
LIN54-207ENST00000508171 KDM6BO15054 1643 aa15.51■□□□□ 0.07
LIN54-207ENST00000508171 DENND4BO75064 1496 aaPredicted RBP15.49■□□□□ 0.07
LIN54-207ENST00000508171 DISP1Q96F81 1524 aa15.48■□□□□ 0.07
LIN54-207ENST00000508171 KIAA0586Q9BVV6 1533 aa15.48■□□□□ 0.07
LIN54-207ENST00000508171 GCC2Q8IWJ2 1684 aa15.48■□□□□ 0.07
LIN54-207ENST00000508171 KDM5BQ9UGL1 1544 aa15.47■□□□□ 0.07
LIN54-207ENST00000508171 MIA2Q96PC5 1412 aa15.47■□□□□ 0.07
LIN54-207ENST00000508171 KIAA0556O60303 1618 aa15.46■□□□□ 0.06
LIN54-207ENST00000508171 ZNF644Q9H582 1327 aaPredicted RBP15.45■□□□□ 0.06
LIN54-207ENST00000508171 FOXD1Q16676 465 aa15.45■□□□□ 0.06
LIN54-207ENST00000508171 MPHOSPH9Q99550 1183 aa15.44■□□□□ 0.06
LIN54-207ENST00000508171 GRIN2AQ12879 1464 aa15.44■□□□□ 0.06
LIN54-207ENST00000508171 EIF4G3O43432 1585 aaKnown RBP15.44■□□□□ 0.06
LIN54-207ENST00000508171 ANP32CO43423 234 aa15.44■□□□□ 0.06
LIN54-207ENST00000508171 NUP153P49790 1475 aaKnown RBP15.44■□□□□ 0.06
LIN54-207ENST00000508171 AKNAQ7Z591 1439 aa15.42■□□□□ 0.06
LIN54-207ENST00000508171 RAPGEF6Q8TEU7 1601 aa15.4■□□□□ 0.06
LIN54-207ENST00000508171 FBLN2P98095 1184 aa15.4■□□□□ 0.06
LIN54-207ENST00000508171 CHMP7Q8WUX9 453 aaPredicted RBP15.4■□□□□ 0.06
LIN54-207ENST00000508171 CCER2I3L3R5 266 aa15.4■□□□□ 0.06
LIN54-207ENST00000508171 DAPK1P53355 1430 aa15.4■□□□□ 0.06
LIN54-207ENST00000508171 ERCC6Q03468 1493 aa15.39■□□□□ 0.05
LIN54-207ENST00000508171 ABCC5O15440 1437 aa15.39■□□□□ 0.05
LIN54-207ENST00000508171 L3MBTL2Q969R5 705 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms