RNA–Protein interactions for RNA: ENST00000507594.1

SMAD1-207, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 558 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-207ENST00000507594 CARMIL1Q5VZK9 1371 aa14.82□□□□□ -0.04
SMAD1-207ENST00000507594 SYNJ2O15056 1496 aa14.82□□□□□ -0.04
SMAD1-207ENST00000507594 RAPGEF2Q9Y4G8 1499 aa14.77□□□□□ -0.04
SMAD1-207ENST00000507594 GRIN2AQ12879 1464 aa14.76□□□□□ -0.05
SMAD1-207ENST00000507594 KIF21BO75037 1637 aa14.74□□□□□ -0.05
SMAD1-207ENST00000507594 GOLGA3Q08378 1498 aa14.72□□□□□ -0.05
SMAD1-207ENST00000507594 PRXQ9BXM0 1461 aa14.72□□□□□ -0.05
SMAD1-207ENST00000507594 SLC4A1APQ9BWU0 796 aaKnown RBP14.72□□□□□ -0.05
SMAD1-207ENST00000507594 UBTFP17480 764 aaKnown RBP14.71□□□□□ -0.05
SMAD1-207ENST00000507594 OSCARQ8IYS5 282 aa14.68□□□□□ -0.06
SMAD1-207ENST00000507594 CEP170Q5SW79 1584 aa14.68□□□□□ -0.06
SMAD1-207ENST00000507594 CTTNBP2Q8WZ74 1663 aa14.68□□□□□ -0.06
SMAD1-207ENST00000507594 RANGAP1P46060 587 aaPredicted RBP14.65□□□□□ -0.06
SMAD1-207ENST00000507594 NUP160Q12769 1436 aa14.63□□□□□ -0.07
SMAD1-207ENST00000507594 IQGAP2Q13576 1575 aa14.62□□□□□ -0.07
SMAD1-207ENST00000507594 KIAA0586Q9BVV6 1533 aa14.6□□□□□ -0.07
SMAD1-207ENST00000507594 LOC105371045A0A1W2PR82 267 aa14.59□□□□□ -0.07
SMAD1-207ENST00000507594 CLASP1Q7Z460 1538 aa14.59□□□□□ -0.07
SMAD1-207ENST00000507594 TNIKQ9UKE5 1360 aa14.52□□□□□ -0.08
SMAD1-207ENST00000507594 TTBK1Q5TCY1 1321 aaPredicted RBP14.52□□□□□ -0.08
SMAD1-207ENST00000507594 JPH4Q96JJ6 628 aa14.52□□□□□ -0.09
SMAD1-207ENST00000507594 CARMIL2Q6F5E8 1435 aa14.5□□□□□ -0.09
SMAD1-207ENST00000507594 PRG4Q92954 1404 aaPredicted RBP14.5□□□□□ -0.09
SMAD1-207ENST00000507594 SHROOM2Q13796 1616 aa14.5□□□□□ -0.09
SMAD1-207ENST00000507594 P3H3Q8IVL6 736 aa14.48□□□□□ -0.09
SMAD1-207ENST00000507594 UGGT2Q9NYU1 1516 aa14.47□□□□□ -0.09
SMAD1-207ENST00000507594 KIAA0556O60303 1618 aa14.46□□□□□ -0.09
SMAD1-207ENST00000507594 NPM3O75607 178 aaKnown RBP14.46□□□□□ -0.09
SMAD1-207ENST00000507594 CLIP1P30622 1438 aa14.46□□□□□ -0.09
SMAD1-207ENST00000507594 CEP162Q5TB80 1403 aa14.46□□□□□ -0.09
SMAD1-207ENST00000507594 EFCAB5A4FU69 1503 aa14.46□□□□□ -0.1
SMAD1-207ENST00000507594 ARHGEF11O15085 1522 aa14.46□□□□□ -0.1
SMAD1-207ENST00000507594 SCAF1Q9H7N4 1312 aaKnown RBP14.44□□□□□ -0.1
SMAD1-207ENST00000507594 ERCC6L2Q5T890 1561 aa14.44□□□□□ -0.1
SMAD1-207ENST00000507594 RIMBP3CA6NJZ7 1639 aa14.44□□□□□ -0.1
SMAD1-207ENST00000507594 RIMBP3BA6NNM3 1639 aa14.44□□□□□ -0.1
SMAD1-207ENST00000507594 RIMBP3Q9UFD9 1639 aa14.44□□□□□ -0.1
SMAD1-207ENST00000507594 SAMD9Q5K651 1589 aa14.43□□□□□ -0.1
SMAD1-207ENST00000507594 FHOD3Q2V2M9 1422 aa14.42□□□□□ -0.1
SMAD1-207ENST00000507594 DISP1Q96F81 1524 aa14.41□□□□□ -0.1
SMAD1-207ENST00000507594 CNKSR2Q8WXI2 1034 aa14.4□□□□□ -0.1
SMAD1-207ENST00000507594 ARHGAP35Q9NRY4 1499 aa14.38□□□□□ -0.11
SMAD1-207ENST00000507594 DNAJC5Q9H3Z4 198 aa14.38□□□□□ -0.11
SMAD1-207ENST00000507594 PTPRGP23470 1445 aa14.37□□□□□ -0.11
SMAD1-207ENST00000507594 ATP1B4Q9UN42 357 aaPredicted RBP14.35□□□□□ -0.11
SMAD1-207ENST00000507594 ARAP1Q96P48 1450 aa14.34□□□□□ -0.11
SMAD1-207ENST00000507594 CYB5RLQ6IPT4 315 aa14.34□□□□□ -0.11
SMAD1-207ENST00000507594 FMN1Q68DA7 1419 aa14.32□□□□□ -0.12
SMAD1-207ENST00000507594 RAPGEF6Q8TEU7 1601 aa14.29□□□□□ -0.12
SMAD1-207ENST00000507594 ARID3CA6NKF2 412 aa14.28□□□□□ -0.12
SMAD1-207ENST00000507594 MSH5O43196 834 aa14.28□□□□□ -0.12
SMAD1-207ENST00000507594 PCF11O94913 1555 aaKnown RBP14.27□□□□□ -0.12
SMAD1-207ENST00000507594 PLB1Q6P1J6 1458 aa14.27□□□□□ -0.12
SMAD1-207ENST00000507594 UACAQ9BZF9 1416 aa14.27□□□□□ -0.12
SMAD1-207ENST00000507594 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.27□□□□□ -0.13
SMAD1-207ENST00000507594 HNRNPUL2Q1KMD3 747 aaKnown RBP14.27□□□□□ -0.13
SMAD1-207ENST00000507594 HECW1Q76N89 1606 aa14.26□□□□□ -0.13
SMAD1-207ENST00000507594 NPM1P06748 294 aaKnown RBP eCLIP14.25□□□□□ -0.13
SMAD1-207ENST00000507594 ABCC2Q92887 1545 aa14.25□□□□□ -0.13
SMAD1-207ENST00000507594 VPS8Q8N3P4 1428 aa14.24□□□□□ -0.13
SMAD1-207ENST00000507594 ABCA8O94911 1581 aa14.24□□□□□ -0.13
SMAD1-207ENST00000507594 ADCY10Q96PN6 1610 aa14.23□□□□□ -0.13
SMAD1-207ENST00000507594 APLP2Q06481 763 aa14.22□□□□□ -0.13
SMAD1-207ENST00000507594 FYCO1Q9BQS8 1478 aa14.22□□□□□ -0.13
SMAD1-207ENST00000507594 CASKIN1Q8WXD9 1431 aa14.21□□□□□ -0.13
SMAD1-207ENST00000507594 UHRF1BP1LA0JNW5 1464 aa14.19□□□□□ -0.14
SMAD1-207ENST00000507594 ZCCHC11Q5TAX3 1644 aaKnown RBP14.18□□□□□ -0.14
SMAD1-207ENST00000507594 NUP153P49790 1475 aaKnown RBP14.18□□□□□ -0.14
SMAD1-207ENST00000507594 CCDC18Q5T9S5 1454 aa14.17□□□□□ -0.14
SMAD1-207ENST00000507594 CDK13Q14004 1512 aaKnown RBP14.16□□□□□ -0.14
SMAD1-207ENST00000507594 EPRSP07814 1512 aaKnown RBP14.15□□□□□ -0.14
SMAD1-207ENST00000507594 LRRIQ1Q96JM4 1722 aa14.14□□□□□ -0.15
SMAD1-207ENST00000507594 CDK11AQ9UQ88 783 aaPredicted RBP14.13□□□□□ -0.15
SMAD1-207ENST00000507594 KDM5BQ9UGL1 1544 aa14.12□□□□□ -0.15
SMAD1-207ENST00000507594 CFAP43Q8NDM7 1665 aa14.12□□□□□ -0.15
SMAD1-207ENST00000507594 ATP10BO94823 1461 aa14.12□□□□□ -0.15
SMAD1-207ENST00000507594 TIAM1Q13009 1591 aa14.09□□□□□ -0.15
SMAD1-207ENST00000507594 PLEKHD1A6NEE1 506 aa14.09□□□□□ -0.15
SMAD1-207ENST00000507594 MTUS2Q5JR59 1369 aa14.09□□□□□ -0.15
SMAD1-207ENST00000507594 ASXL2Q76L83 1435 aa14.08□□□□□ -0.15
SMAD1-207ENST00000507594 KCNH8Q96L42 1107 aa14.08□□□□□ -0.16
SMAD1-207ENST00000507594 WDR7Q9Y4E6 1490 aa14.06□□□□□ -0.16
SMAD1-207ENST00000507594 MAPKBP1O60336 1514 aa14.06□□□□□ -0.16
SMAD1-207ENST00000507594 EHBP1L1Q8N3D4 1523 aa14.05□□□□□ -0.16
SMAD1-207ENST00000507594 TRHP20396 242 aaPredicted RBP14.04□□□□□ -0.16
SMAD1-207ENST00000507594 PPARGC1BQ86YN6 1023 aaKnown RBP14.04□□□□□ -0.16
SMAD1-207ENST00000507594 KIF14Q15058 1648 aa14.04□□□□□ -0.16
SMAD1-207ENST00000507594 TROQ12816 1431 aaPredicted RBP14.02□□□□□ -0.16
SMAD1-207ENST00000507594 MAP3K1Q13233 1512 aa14.01□□□□□ -0.17
SMAD1-207ENST00000507594 ZBTB22O15209 634 aa14.01□□□□□ -0.17
SMAD1-207ENST00000507594 SUPT6HQ7KZ85 1726 aaKnown RBP14.01□□□□□ -0.17
SMAD1-207ENST00000507594 MAGI3Q5TCQ9 1506 aa14□□□□□ -0.17
SMAD1-207ENST00000507594 LRRC9Q6ZRR7 1453 aa14□□□□□ -0.17
SMAD1-207ENST00000507594 FAM69CQ0P6D2 419 aa13.99□□□□□ -0.17
SMAD1-207ENST00000507594 DIP2BQ9P265 1576 aa13.98□□□□□ -0.17
SMAD1-207ENST00000507594 KANK4Q5T7N3 995 aaPredicted RBP13.97□□□□□ -0.17
SMAD1-207ENST00000507594 ABCC10Q5T3U5 1492 aa13.96□□□□□ -0.17
SMAD1-207ENST00000507594 FOXD4L1Q9NU39 408 aa13.96□□□□□ -0.17
SMAD1-207ENST00000507594 TSPOAP1O95153 1857 aa13.95□□□□□ -0.18
SMAD1-207ENST00000507594 RNF216Q9NWF9 866 aaPredicted RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms