RNA–Protein interactions for RNA: ENST00000507232.5

SPDL1-206, Transcript of spindle apparatus coiled-coil protein 1, humanhuman

TSL 1 (best)

Gene SPDL1, Length 2,144 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPDL1-206ENST00000507232 FHOD3Q2V2M9 1422 aa19.16■□□□□ 0.66
SPDL1-206ENST00000507232 URB2Q14146 1524 aaKnown RBP19.15■□□□□ 0.66
SPDL1-206ENST00000507232 TDRD9Q8NDG6 1382 aaKnown RBP19.13■□□□□ 0.65
SPDL1-206ENST00000507232 MIER1Q8N108 512 aa19.13■□□□□ 0.65
SPDL1-206ENST00000507232 PCF11O94913 1555 aaKnown RBP19.12■□□□□ 0.65
SPDL1-206ENST00000507232 FAM50AQ14320 339 aaKnown RBP19.1■□□□□ 0.65
SPDL1-206ENST00000507232 LRRC9Q6ZRR7 1453 aa19.1■□□□□ 0.65
SPDL1-206ENST00000507232 PHLDB1Q86UU1 1377 aa19.09■□□□□ 0.65
SPDL1-206ENST00000507232 LAMC3Q9Y6N6 1575 aa19.07■□□□□ 0.64
SPDL1-206ENST00000507232 CENPBP07199 599 aaPredicted RBP19.06■□□□□ 0.64
SPDL1-206ENST00000507232 FHAD1B1AJZ9 1412 aa19.05■□□□□ 0.64
SPDL1-206ENST00000507232 RAB3GAP2Q9H2M9 1393 aa19.04■□□□□ 0.64
SPDL1-206ENST00000507232 CUL7Q14999 1698 aa19.02■□□□□ 0.64
SPDL1-206ENST00000507232 KIF21AQ7Z4S6 1674 aa19.02■□□□□ 0.64
SPDL1-206ENST00000507232 GTF3C3Q9Y5Q9 886 aa19.01■□□□□ 0.63
SPDL1-206ENST00000507232 CTTNBP2Q8WZ74 1663 aa19.01■□□□□ 0.63
SPDL1-206ENST00000507232 MAP3K1Q13233 1512 aa19.01■□□□□ 0.63
SPDL1-206ENST00000507232 WDR97A6NE52 1622 aa19.01■□□□□ 0.63
SPDL1-206ENST00000507232 CLSPNQ9HAW4 1339 aa19■□□□□ 0.63
SPDL1-206ENST00000507232 CFAP43Q8NDM7 1665 aa19■□□□□ 0.63
SPDL1-206ENST00000507232 PDS5BQ9NTI5 1447 aa18.99■□□□□ 0.63
SPDL1-206ENST00000507232 GAPVD1Q14C86 1478 aa18.98■□□□□ 0.63
SPDL1-206ENST00000507232 ABCA5Q8WWZ7 1642 aa18.95■□□□□ 0.62
SPDL1-206ENST00000507232 EFCAB5A4FU69 1503 aa18.94■□□□□ 0.62
SPDL1-206ENST00000507232 FYCO1Q9BQS8 1478 aa18.94■□□□□ 0.62
SPDL1-206ENST00000507232 CASKIN1Q8WXD9 1431 aa18.93■□□□□ 0.62
SPDL1-206ENST00000507232 SETD5Q9C0A6 1442 aa18.93■□□□□ 0.62
SPDL1-206ENST00000507232 MAPKBP1O60336 1514 aa18.9■□□□□ 0.62
SPDL1-206ENST00000507232 SIN3AQ96ST3 1273 aa18.9■□□□□ 0.62
SPDL1-206ENST00000507232 FMN1Q68DA7 1419 aa18.87■□□□□ 0.61
SPDL1-206ENST00000507232 SNAPC4Q5SXM2 1469 aa18.87■□□□□ 0.61
SPDL1-206ENST00000507232 AQRO60306 1485 aaKnown RBP eCLIP18.86■□□□□ 0.61
SPDL1-206ENST00000507232 MTUS2Q5JR59 1369 aa18.86■□□□□ 0.61
SPDL1-206ENST00000507232 LRRIQ1Q96JM4 1722 aa18.85■□□□□ 0.61
SPDL1-206ENST00000507232 ARID3CA6NKF2 412 aa18.85■□□□□ 0.61
SPDL1-206ENST00000507232 TARBP1Q13395 1621 aaKnown RBP18.84■□□□□ 0.61
SPDL1-206ENST00000507232 SAMD9Q5K651 1589 aa18.82■□□□□ 0.6
SPDL1-206ENST00000507232 FGD6Q6ZV73 1430 aa18.79■□□□□ 0.6
SPDL1-206ENST00000507232 PBRM1Q86U86 1689 aa18.78■□□□□ 0.6
SPDL1-206ENST00000507232 GRIN2BQ13224 1484 aa18.76■□□□□ 0.59
SPDL1-206ENST00000507232 PTPRKQ15262 1439 aa18.75■□□□□ 0.59
SPDL1-206ENST00000507232 NCOA2Q15596 1464 aa18.74■□□□□ 0.59
SPDL1-206ENST00000507232 HIRIP3Q9BW71 556 aaPredicted RBP18.74■□□□□ 0.59
SPDL1-206ENST00000507232 MRC2Q9UBG0 1479 aa18.72■□□□□ 0.59
SPDL1-206ENST00000507232 ZNF608Q9ULD9 1512 aaPredicted RBP18.72■□□□□ 0.59
SPDL1-206ENST00000507232 MAGI3Q5TCQ9 1506 aa18.71■□□□□ 0.59
SPDL1-206ENST00000507232 CHIC2Q9UKJ5 165 aa18.7■□□□□ 0.58
SPDL1-206ENST00000507232 ADAMTS12P58397 1594 aa18.68■□□□□ 0.58
SPDL1-206ENST00000507232 MYOM3Q5VTT5 1437 aa18.67■□□□□ 0.58
SPDL1-206ENST00000507232 IQGAP2Q13576 1575 aa18.67■□□□□ 0.58
SPDL1-206ENST00000507232 CCDC18Q5T9S5 1454 aa18.67■□□□□ 0.58
SPDL1-206ENST00000507232 SUPT6HQ7KZ85 1726 aaKnown RBP18.67■□□□□ 0.58
SPDL1-206ENST00000507232 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.67■□□□□ 0.58
SPDL1-206ENST00000507232 RRP7BPQ9NSQ0 103 aa18.66■□□□□ 0.58
SPDL1-206ENST00000507232 CDK13Q14004 1512 aaKnown RBP18.66■□□□□ 0.58
SPDL1-206ENST00000507232 KCNH8Q96L42 1107 aa18.65■□□□□ 0.58
SPDL1-206ENST00000507232 EHBP1L1Q8N3D4 1523 aa18.64■□□□□ 0.57
SPDL1-206ENST00000507232 DDX10Q13206 875 aaKnown RBP18.63■□□□□ 0.57
SPDL1-206ENST00000507232 PTPN23Q9H3S7 1636 aa18.62■□□□□ 0.57
SPDL1-206ENST00000507232 THOC2Q8NI27 1593 aaKnown RBP18.61■□□□□ 0.57
SPDL1-206ENST00000507232 UGGT2Q9NYU1 1516 aa18.61■□□□□ 0.57
SPDL1-206ENST00000507232 HFM1A2PYH4 1435 aa18.6■□□□□ 0.57
SPDL1-206ENST00000507232 NAIPQ13075 1403 aa18.6■□□□□ 0.57
SPDL1-206ENST00000507232 EPRSP07814 1512 aaKnown RBP18.59■□□□□ 0.57
SPDL1-206ENST00000507232 HECW1Q76N89 1606 aa18.59■□□□□ 0.57
SPDL1-206ENST00000507232 PPP1R15AO75807 674 aaPredicted RBP18.59■□□□□ 0.57
SPDL1-206ENST00000507232 IFT140Q96RY7 1462 aa18.57■□□□□ 0.56
SPDL1-206ENST00000507232 TONSLQ96HA7 1378 aa18.56■□□□□ 0.56
SPDL1-206ENST00000507232 FBLN2P98095 1184 aa18.56■□□□□ 0.56
SPDL1-206ENST00000507232 UACAQ9BZF9 1416 aa18.55■□□□□ 0.56
SPDL1-206ENST00000507232 TRIM52Q96A61 297 aa18.55■□□□□ 0.56
SPDL1-206ENST00000507232 ERCC6Q03468 1493 aa18.54■□□□□ 0.56
SPDL1-206ENST00000507232 ARHGEF11O15085 1522 aa18.54■□□□□ 0.56
SPDL1-206ENST00000507232 WDR62O43379 1518 aa18.54■□□□□ 0.56
SPDL1-206ENST00000507232 EIF4G3O43432 1585 aaKnown RBP18.52■□□□□ 0.55
SPDL1-206ENST00000507232 KDM6BO15054 1643 aa18.51■□□□□ 0.55
SPDL1-206ENST00000507232 DISP1Q96F81 1524 aa18.49■□□□□ 0.55
SPDL1-206ENST00000507232 FOXD1Q16676 465 aa18.49■□□□□ 0.55
SPDL1-206ENST00000507232 TIMELESSQ9UNS1 1208 aa18.49■□□□□ 0.55
SPDL1-206ENST00000507232 ZNF644Q9H582 1327 aaPredicted RBP18.48■□□□□ 0.55
SPDL1-206ENST00000507232 PELP1Q8IZL8 1130 aaKnown RBP18.48■□□□□ 0.55
SPDL1-206ENST00000507232 KIAA0556O60303 1618 aa18.48■□□□□ 0.55
SPDL1-206ENST00000507232 GRIN2AQ12879 1464 aa18.47■□□□□ 0.55
SPDL1-206ENST00000507232 CHMP7Q8WUX9 453 aaPredicted RBP18.47■□□□□ 0.55
SPDL1-206ENST00000507232 KIAA0586Q9BVV6 1533 aa18.47■□□□□ 0.55
SPDL1-206ENST00000507232 TCOF1Q13428 1488 aaKnown RBP18.46■□□□□ 0.55
SPDL1-206ENST00000507232 NUP153P49790 1475 aaKnown RBP18.43■□□□□ 0.54
SPDL1-206ENST00000507232 DENND4BO75064 1496 aaPredicted RBP18.41■□□□□ 0.54
SPDL1-206ENST00000507232 GCC2Q8IWJ2 1684 aa18.41■□□□□ 0.54
SPDL1-206ENST00000507232 RAPGEF6Q8TEU7 1601 aa18.4■□□□□ 0.54
SPDL1-206ENST00000507232 MPHOSPH9Q99550 1183 aa18.39■□□□□ 0.53
SPDL1-206ENST00000507232 CEP170Q5SW79 1584 aa18.39■□□□□ 0.53
SPDL1-206ENST00000507232 MIA2Q96PC5 1412 aa18.39■□□□□ 0.53
SPDL1-206ENST00000507232 PRG4Q92954 1404 aaPredicted RBP18.38■□□□□ 0.53
SPDL1-206ENST00000507232 PLB1Q6P1J6 1458 aa18.38■□□□□ 0.53
SPDL1-206ENST00000507232 ZNF777Q9ULD5 760 aaPredicted RBP18.38■□□□□ 0.53
SPDL1-206ENST00000507232 KDM5BQ9UGL1 1544 aa18.37■□□□□ 0.53
SPDL1-206ENST00000507232 DAPK1P53355 1430 aa18.36■□□□□ 0.53
SPDL1-206ENST00000507232 SUPT16HQ9Y5B9 1047 aaKnown RBP18.34■□□□□ 0.53
SPDL1-206ENST00000507232 ABCC5O15440 1437 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms