RNA–Protein interactions for RNA: ENST00000506894.5

GPM6A-210, Transcript of glycoprotein M6A, humanhuman

TSL 1 (best) BASIC

Gene GPM6A, Length 2,614 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPM6A-210ENST00000506894 POLA1P09884 1462 aaPredicted RBP22.66■■□□□ 1.22
GPM6A-210ENST00000506894 TOPBP1Q92547 1522 aa22.65■■□□□ 1.22
GPM6A-210ENST00000506894 TIAM1Q13009 1591 aa22.63■■□□□ 1.21
GPM6A-210ENST00000506894 DNMBPQ6XZF7 1577 aa22.62■■□□□ 1.21
GPM6A-210ENST00000506894 FHOD3Q2V2M9 1422 aa22.62■■□□□ 1.21
GPM6A-210ENST00000506894 PCF11O94913 1555 aaKnown RBP22.59■■□□□ 1.21
GPM6A-210ENST00000506894 SUPT16HQ9Y5B9 1047 aaKnown RBP22.59■■□□□ 1.21
GPM6A-210ENST00000506894 PHLDB1Q86UU1 1377 aa22.58■■□□□ 1.2
GPM6A-210ENST00000506894 FAM50AQ14320 339 aaKnown RBP22.55■■□□□ 1.2
GPM6A-210ENST00000506894 ABCA10Q8WWZ4 1543 aa22.55■■□□□ 1.2
GPM6A-210ENST00000506894 LRRC9Q6ZRR7 1453 aa22.54■■□□□ 1.2
GPM6A-210ENST00000506894 URB2Q14146 1524 aaKnown RBP22.53■■□□□ 1.2
GPM6A-210ENST00000506894 TDRD9Q8NDG6 1382 aaKnown RBP22.52■■□□□ 1.2
GPM6A-210ENST00000506894 RAB3GAP2Q9H2M9 1393 aa22.52■■□□□ 1.2
GPM6A-210ENST00000506894 TSHZ2Q9NRE2 1034 aa22.45■■□□□ 1.18
GPM6A-210ENST00000506894 CLSPNQ9HAW4 1339 aa22.45■■□□□ 1.18
GPM6A-210ENST00000506894 CFAP43Q8NDM7 1665 aa22.44■■□□□ 1.18
GPM6A-210ENST00000506894 FHAD1B1AJZ9 1412 aa22.44■■□□□ 1.18
GPM6A-210ENST00000506894 CTTNBP2Q8WZ74 1663 aa22.42■■□□□ 1.18
GPM6A-210ENST00000506894 MAPKBP1O60336 1514 aa22.41■■□□□ 1.18
GPM6A-210ENST00000506894 MAP3K1Q13233 1512 aa22.41■■□□□ 1.18
GPM6A-210ENST00000506894 WDR97A6NE52 1622 aa22.39■■□□□ 1.18
GPM6A-210ENST00000506894 CUL7Q14999 1698 aa22.39■■□□□ 1.17
GPM6A-210ENST00000506894 KIF21AQ7Z4S6 1674 aa22.38■■□□□ 1.17
GPM6A-210ENST00000506894 LAMC3Q9Y6N6 1575 aa22.38■■□□□ 1.17
GPM6A-210ENST00000506894 ANP32EQ9BTT0 268 aa22.38■■□□□ 1.17
GPM6A-210ENST00000506894 SIN3AQ96ST3 1273 aa22.37■■□□□ 1.17
GPM6A-210ENST00000506894 SETD5Q9C0A6 1442 aa22.35■■□□□ 1.17
GPM6A-210ENST00000506894 FYCO1Q9BQS8 1478 aa22.33■■□□□ 1.17
GPM6A-210ENST00000506894 GAPVD1Q14C86 1478 aa22.32■■□□□ 1.16
GPM6A-210ENST00000506894 ABCA5Q8WWZ7 1642 aa22.32■■□□□ 1.16
GPM6A-210ENST00000506894 CASKIN1Q8WXD9 1431 aa22.32■■□□□ 1.16
GPM6A-210ENST00000506894 EFCAB5A4FU69 1503 aa22.31■■□□□ 1.16
GPM6A-210ENST00000506894 LRRIQ1Q96JM4 1722 aa22.3■■□□□ 1.16
GPM6A-210ENST00000506894 SNAPC4Q5SXM2 1469 aa22.28■■□□□ 1.16
GPM6A-210ENST00000506894 PDS5BQ9NTI5 1447 aa22.26■■□□□ 1.15
GPM6A-210ENST00000506894 ARID3CA6NKF2 412 aa22.25■■□□□ 1.15
GPM6A-210ENST00000506894 BCL11AQ9H165 835 aa22.25■■□□□ 1.15
GPM6A-210ENST00000506894 MTUS2Q5JR59 1369 aa22.23■■□□□ 1.15
GPM6A-210ENST00000506894 BCANQ96GW7 911 aa22.23■■□□□ 1.15
GPM6A-210ENST00000506894 HIRIP3Q9BW71 556 aaPredicted RBP22.22■■□□□ 1.15
GPM6A-210ENST00000506894 FMN1Q68DA7 1419 aa22.22■■□□□ 1.15
GPM6A-210ENST00000506894 KCNH8Q96L42 1107 aa22.22■■□□□ 1.15
GPM6A-210ENST00000506894 AQRO60306 1485 aaKnown RBP eCLIP22.2■■□□□ 1.14
GPM6A-210ENST00000506894 SAMD9Q5K651 1589 aa22.19■■□□□ 1.14
GPM6A-210ENST00000506894 FGD6Q6ZV73 1430 aa22.19■■□□□ 1.14
GPM6A-210ENST00000506894 PTPRKQ15262 1439 aa22.18■■□□□ 1.14
GPM6A-210ENST00000506894 TARBP1Q13395 1621 aaKnown RBP22.18■■□□□ 1.14
GPM6A-210ENST00000506894 GRIN2BQ13224 1484 aa22.13■■□□□ 1.13
GPM6A-210ENST00000506894 NCOA2Q15596 1464 aa22.12■■□□□ 1.13
GPM6A-210ENST00000506894 MAGI3Q5TCQ9 1506 aa22.11■■□□□ 1.13
GPM6A-210ENST00000506894 PBRM1Q86U86 1689 aa22.1■■□□□ 1.13
GPM6A-210ENST00000506894 DDX10Q13206 875 aaKnown RBP22.07■■□□□ 1.12
GPM6A-210ENST00000506894 CHIC2Q9UKJ5 165 aa22.07■■□□□ 1.12
GPM6A-210ENST00000506894 CCDC18Q5T9S5 1454 aa22.07■■□□□ 1.12
GPM6A-210ENST00000506894 FKBP8Q14318 412 aa22.07■■□□□ 1.12
GPM6A-210ENST00000506894 ZNF608Q9ULD9 1512 aaPredicted RBP22.04■■□□□ 1.12
GPM6A-210ENST00000506894 MYOM3Q5VTT5 1437 aa22.03■■□□□ 1.12
GPM6A-210ENST00000506894 RRP7BPQ9NSQ0 103 aa22.03■■□□□ 1.12
GPM6A-210ENST00000506894 CDK13Q14004 1512 aaKnown RBP22.03■■□□□ 1.12
GPM6A-210ENST00000506894 SUPT6HQ7KZ85 1726 aaKnown RBP22.02■■□□□ 1.12
GPM6A-210ENST00000506894 PTPN23Q9H3S7 1636 aa22.01■■□□□ 1.11
GPM6A-210ENST00000506894 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22■■□□□ 1.11
GPM6A-210ENST00000506894 ADAMTS12P58397 1594 aa21.99■■□□□ 1.11
GPM6A-210ENST00000506894 IQGAP2Q13576 1575 aa21.98■■□□□ 1.11
GPM6A-210ENST00000506894 EHBP1L1Q8N3D4 1523 aa21.98■■□□□ 1.11
GPM6A-210ENST00000506894 NAIPQ13075 1403 aa21.98■■□□□ 1.11
GPM6A-210ENST00000506894 HFM1A2PYH4 1435 aa21.97■■□□□ 1.11
GPM6A-210ENST00000506894 MRC2Q9UBG0 1479 aa21.97■■□□□ 1.11
GPM6A-210ENST00000506894 PPP1R15AO75807 674 aaPredicted RBP21.96■■□□□ 1.11
GPM6A-210ENST00000506894 UGGT2Q9NYU1 1516 aa21.96■■□□□ 1.11
GPM6A-210ENST00000506894 RBM19Q9Y4C8 960 aaKnown RBP21.94■■□□□ 1.1
GPM6A-210ENST00000506894 TONSLQ96HA7 1378 aa21.93■■□□□ 1.1
GPM6A-210ENST00000506894 THOC2Q8NI27 1593 aaKnown RBP21.92■■□□□ 1.1
GPM6A-210ENST00000506894 EPRSP07814 1512 aaKnown RBP21.92■■□□□ 1.1
GPM6A-210ENST00000506894 KDM6BO15054 1643 aa21.91■■□□□ 1.1
GPM6A-210ENST00000506894 UACAQ9BZF9 1416 aa21.91■■□□□ 1.1
GPM6A-210ENST00000506894 HECW1Q76N89 1606 aa21.9■■□□□ 1.1
GPM6A-210ENST00000506894 ARHGEF11O15085 1522 aa21.88■■□□□ 1.09
GPM6A-210ENST00000506894 FOXD1Q16676 465 aa21.87■■□□□ 1.09
GPM6A-210ENST00000506894 TRIM52Q96A61 297 aa21.87■■□□□ 1.09
GPM6A-210ENST00000506894 WDR62O43379 1518 aa21.86■■□□□ 1.09
GPM6A-210ENST00000506894 NEFLP07196 543 aa21.84■■□□□ 1.09
GPM6A-210ENST00000506894 ZNF644Q9H582 1327 aaPredicted RBP21.82■■□□□ 1.08
GPM6A-210ENST00000506894 DENND4BO75064 1496 aaPredicted RBP21.81■■□□□ 1.08
GPM6A-210ENST00000506894 FBLN2P98095 1184 aa21.8■■□□□ 1.08
GPM6A-210ENST00000506894 TIMELESSQ9UNS1 1208 aa21.79■■□□□ 1.08
GPM6A-210ENST00000506894 EIF4G3O43432 1585 aaKnown RBP21.79■■□□□ 1.08
GPM6A-210ENST00000506894 DISP1Q96F81 1524 aa21.79■■□□□ 1.08
GPM6A-210ENST00000506894 IFT140Q96RY7 1462 aa21.78■■□□□ 1.08
GPM6A-210ENST00000506894 KDM5BQ9UGL1 1544 aa21.77■■□□□ 1.08
GPM6A-210ENST00000506894 TCOF1Q13428 1488 aaKnown RBP21.77■■□□□ 1.08
GPM6A-210ENST00000506894 KIAA0556O60303 1618 aa21.76■■□□□ 1.07
GPM6A-210ENST00000506894 MSH5O43196 834 aa21.75■■□□□ 1.07
GPM6A-210ENST00000506894 GCC2Q8IWJ2 1684 aa21.75■■□□□ 1.07
GPM6A-210ENST00000506894 NUP153P49790 1475 aaKnown RBP21.74■■□□□ 1.07
GPM6A-210ENST00000506894 ERCC6Q03468 1493 aa21.73■■□□□ 1.07
GPM6A-210ENST00000506894 GRIN2AQ12879 1464 aa21.73■■□□□ 1.07
GPM6A-210ENST00000506894 KIAA0586Q9BVV6 1533 aa21.71■■□□□ 1.07
GPM6A-210ENST00000506894 MPHOSPH9Q99550 1183 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms