RNA–Protein interactions for RNA: ENST00000506396.1

CDH6-203, Transcript of cadherin 6, humanhuman

TSL 2

Gene CDH6, Length 2,759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6-203ENST00000506396 MAPKBP1O60336 1514 aa25.43■■□□□ 1.66
CDH6-203ENST00000506396 TRIM52Q96A61 297 aa25.42■■□□□ 1.66
CDH6-203ENST00000506396 ATAD2BQ9ULI0 1458 aa25.36■■□□□ 1.65
CDH6-203ENST00000506396 WDR97A6NE52 1622 aa25.35■■□□□ 1.65
CDH6-203ENST00000506396 BICRAQ9NZM4 1560 aa25.34■■□□□ 1.65
CDH6-203ENST00000506396 CCDC136Q96JN2 1154 aa25.33■■□□□ 1.64
CDH6-203ENST00000506396 BIVM-ERCC5R4GMW8 1640 aa25.31■■□□□ 1.64
CDH6-203ENST00000506396 PPP1R15AO75807 674 aaPredicted RBP25.31■■□□□ 1.64
CDH6-203ENST00000506396 SIN3AQ96ST3 1273 aa25.31■■□□□ 1.64
CDH6-203ENST00000506396 NBR1Q14596 966 aa25.31■■□□□ 1.64
CDH6-203ENST00000506396 ERICH6BQ5W0A0 696 aa25.31■■□□□ 1.64
CDH6-203ENST00000506396 ARHGAP35Q9NRY4 1499 aa25.28■■□□□ 1.64
CDH6-203ENST00000506396 HIRIP3Q9BW71 556 aaPredicted RBP25.27■■□□□ 1.64
CDH6-203ENST00000506396 SETD5Q9C0A6 1442 aa25.26■■□□□ 1.63
CDH6-203ENST00000506396 CCER2I3L3R5 266 aa25.24■■□□□ 1.63
CDH6-203ENST00000506396 ANP32CO43423 234 aa25.24■■□□□ 1.63
CDH6-203ENST00000506396 IRX6P78412 446 aaPredicted RBP25.24■■□□□ 1.63
CDH6-203ENST00000506396 KIF27Q86VH2 1401 aa25.19■■□□□ 1.62
CDH6-203ENST00000506396 NOP58Q9Y2X3 529 aaKnown RBP25.15■■□□□ 1.62
CDH6-203ENST00000506396 FAM50AQ14320 339 aaKnown RBP25.14■■□□□ 1.61
CDH6-203ENST00000506396 TIAM1Q13009 1591 aa25.12■■□□□ 1.61
CDH6-203ENST00000506396 IL27Q8NEV9 243 aa25.11■■□□□ 1.61
CDH6-203ENST00000506396 UBE2Q2Q8WVN8 375 aa25.11■■□□□ 1.61
CDH6-203ENST00000506396 RTN4Q9NQC3 1192 aaKnown RBP25.11■■□□□ 1.61
CDH6-203ENST00000506396 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.11■■□□□ 1.61
CDH6-203ENST00000506396 CUX1P39880 1505 aa25.1■■□□□ 1.61
CDH6-203ENST00000506396 TIMELESSQ9UNS1 1208 aa25.1■■□□□ 1.61
CDH6-203ENST00000506396 PHLDB1Q86UU1 1377 aa25.09■■□□□ 1.61
CDH6-203ENST00000506396 PAK3O75914 559 aaPredicted RBP25.08■■□□□ 1.61
CDH6-203ENST00000506396 LRRC9Q6ZRR7 1453 aa25.04■■□□□ 1.6
CDH6-203ENST00000506396 MAP3K1Q13233 1512 aa25.03■■□□□ 1.6
CDH6-203ENST00000506396 RTL5Q5HYW3 569 aaPredicted RBP25.02■■□□□ 1.6
CDH6-203ENST00000506396 HNRNPUQ00839 825 aaKnown RBP eCLIP24.99■■□□□ 1.59
CDH6-203ENST00000506396 PPP4R2Q9NY27 417 aa24.97■■□□□ 1.59
CDH6-203ENST00000506396 TONSLQ96HA7 1378 aa24.94■■□□□ 1.58
CDH6-203ENST00000506396 ATP1B4Q9UN42 357 aaPredicted RBP24.9■■□□□ 1.58
CDH6-203ENST00000506396 B4GALNT3Q6L9W6 998 aa24.89■■□□□ 1.57
CDH6-203ENST00000506396 IGF1RP08069 1367 aa24.85■■□□□ 1.57
CDH6-203ENST00000506396 FHAD1B1AJZ9 1412 aa24.83■■□□□ 1.57
CDH6-203ENST00000506396 P3H3Q8IVL6 736 aa24.83■■□□□ 1.57
CDH6-203ENST00000506396 CFAP43Q8NDM7 1665 aa24.82■■□□□ 1.56
CDH6-203ENST00000506396 PCF11O94913 1555 aaKnown RBP24.81■■□□□ 1.56
CDH6-203ENST00000506396 CARMIL1Q5VZK9 1371 aa24.79■■□□□ 1.56
CDH6-203ENST00000506396 ANP32AP39687 249 aaKnown RBP24.78■■□□□ 1.56
CDH6-203ENST00000506396 IPO9Q96P70 1041 aaKnown RBP24.77■■□□□ 1.56
CDH6-203ENST00000506396 ZBTB47Q9UFB7 747 aaPredicted RBP24.77■■□□□ 1.56
CDH6-203ENST00000506396 CCDC18Q5T9S5 1454 aa24.74■■□□□ 1.55
CDH6-203ENST00000506396 CFTRP13569 1480 aa24.73■■□□□ 1.55
CDH6-203ENST00000506396 EIF5BO60841 1220 aaKnown RBP24.71■■□□□ 1.55
CDH6-203ENST00000506396 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.71■■□□□ 1.55
CDH6-203ENST00000506396 HMGXB3Q12766 1538 aa24.68■■□□□ 1.54
CDH6-203ENST00000506396 UACAQ9BZF9 1416 aa24.68■■□□□ 1.54
CDH6-203ENST00000506396 FHOD3Q2V2M9 1422 aa24.67■■□□□ 1.54
CDH6-203ENST00000506396 WASHC2AQ641Q2 1341 aa24.67■■□□□ 1.54
CDH6-203ENST00000506396 NCAPD3P42695 1498 aa24.66■■□□□ 1.54
CDH6-203ENST00000506396 FGD6Q6ZV73 1430 aa24.65■■□□□ 1.54
CDH6-203ENST00000506396 CCDC184Q52MB2 194 aa24.64■■□□□ 1.54
CDH6-203ENST00000506396 HSPA5P11021 654 aaKnown RBP24.63■■□□□ 1.53
CDH6-203ENST00000506396 FYCO1Q9BQS8 1478 aa24.62■■□□□ 1.53
CDH6-203ENST00000506396 HFM1A2PYH4 1435 aa24.62■■□□□ 1.53
CDH6-203ENST00000506396 KDM5BQ9UGL1 1544 aa24.61■■□□□ 1.53
CDH6-203ENST00000506396 PTPRKQ15262 1439 aa24.6■■□□□ 1.53
CDH6-203ENST00000506396 PTPN23Q9H3S7 1636 aa24.6■■□□□ 1.53
CDH6-203ENST00000506396 FAM9BQ8IZU0 186 aa24.59■■□□□ 1.53
CDH6-203ENST00000506396 FGD5Q6ZNL6 1462 aa24.58■■□□□ 1.52
CDH6-203ENST00000506396 CASKIN1Q8WXD9 1431 aa24.58■■□□□ 1.52
CDH6-203ENST00000506396 NEFMP07197 916 aa24.57■■□□□ 1.52
CDH6-203ENST00000506396 C11orf95C9JLR9 678 aaPredicted RBP24.55■■□□□ 1.52
CDH6-203ENST00000506396 AQRO60306 1485 aaKnown RBP eCLIP24.54■■□□□ 1.52
CDH6-203ENST00000506396 CNTLNQ9NXG0 1405 aa24.54■■□□□ 1.52
CDH6-203ENST00000506396 LAS1LQ9Y4W2 734 aaKnown RBP24.54■■□□□ 1.52
CDH6-203ENST00000506396 NAIPQ13075 1403 aa24.53■■□□□ 1.52
CDH6-203ENST00000506396 BRPF3Q9ULD4 1205 aa24.53■■□□□ 1.52
CDH6-203ENST00000506396 EIF4G2P78344 907 aaKnown RBP eCLIP24.52■■□□□ 1.52
CDH6-203ENST00000506396 MRS2Q9HD23 443 aa24.52■■□□□ 1.52
CDH6-203ENST00000506396 ZBED9Q6R2W3 1325 aa24.51■■□□□ 1.51
CDH6-203ENST00000506396 NCOA2Q15596 1464 aa24.51■■□□□ 1.51
CDH6-203ENST00000506396 MTUS2Q5JR59 1369 aa24.51■■□□□ 1.51
CDH6-203ENST00000506396 PKNOX2Q96KN3 472 aa24.5■■□□□ 1.51
CDH6-203ENST00000506396 PRKRIP1Q9H875 184 aaPredicted RBP24.49■■□□□ 1.51
CDH6-203ENST00000506396 WASHC2CQ9Y4E1 1318 aa24.49■■□□□ 1.51
CDH6-203ENST00000506396 USP35Q9P2H5 1018 aa24.47■■□□□ 1.51
CDH6-203ENST00000506396 EFCAB5A4FU69 1503 aa24.47■■□□□ 1.51
CDH6-203ENST00000506396 FMN1Q68DA7 1419 aa24.47■■□□□ 1.51
CDH6-203ENST00000506396 PRDM2Q13029 1718 aa24.46■■□□□ 1.51
CDH6-203ENST00000506396 NPM2Q86SE8 214 aaKnown RBP24.45■■□□□ 1.5
CDH6-203ENST00000506396 RRP7BPQ9NSQ0 103 aa24.4■■□□□ 1.5
CDH6-203ENST00000506396 CCDC7Q96M83 1385 aa24.4■■□□□ 1.5
CDH6-203ENST00000506396 MYOM3Q5VTT5 1437 aa24.39■■□□□ 1.5
CDH6-203ENST00000506396 NCOA1Q15788 1441 aa24.37■■□□□ 1.49
CDH6-203ENST00000506396 SNAPC4Q5SXM2 1469 aa24.37■■□□□ 1.49
CDH6-203ENST00000506396 CHIC2Q9UKJ5 165 aa24.36■■□□□ 1.49
CDH6-203ENST00000506396 AKNAQ7Z591 1439 aa24.34■■□□□ 1.49
CDH6-203ENST00000506396 L3MBTL2Q969R5 705 aa24.33■■□□□ 1.49
CDH6-203ENST00000506396 DENND4BO75064 1496 aaPredicted RBP24.33■■□□□ 1.49
CDH6-203ENST00000506396 CADPSQ9ULU8 1353 aa24.33■■□□□ 1.48
CDH6-203ENST00000506396 PPM1GO15355 546 aaPredicted RBP24.31■■□□□ 1.48
CDH6-203ENST00000506396 GSE1Q14687 1217 aa24.3■■□□□ 1.48
CDH6-203ENST00000506396 HECW1Q76N89 1606 aa24.28■■□□□ 1.48
CDH6-203ENST00000506396 CTTNBP2Q8WZ74 1663 aa24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms