RNA–Protein interactions for RNA: ENST00000506396.1

CDH6-203, Transcript of cadherin 6, humanhuman

TSL 2

Gene CDH6, Length 2,759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6-203ENST00000506396 NISCHQ9Y2I1 1504 aa34.63■■■■□ 3.13
CDH6-203ENST00000506396 HRCP23327 699 aa30.71■■■□□ 2.51
CDH6-203ENST00000506396 SHROOM4Q9ULL8 1493 aa30.46■■■□□ 2.47
CDH6-203ENST00000506396 PELP1Q8IZL8 1130 aaKnown RBP30.41■■■□□ 2.46
CDH6-203ENST00000506396 SUPT5HO00267 1087 aaKnown RBP30.24■■■□□ 2.43
CDH6-203ENST00000506396 PPARGC1BQ86YN6 1023 aaKnown RBP30.11■■■□□ 2.41
CDH6-203ENST00000506396 PCGF6Q9BYE7 350 aa29.89■■■□□ 2.38
CDH6-203ENST00000506396 MYO15BQ96JP2 1530 aa29.79■■■□□ 2.36
CDH6-203ENST00000506396 CHIC1Q5VXU3 224 aa29.65■■■□□ 2.34
CDH6-203ENST00000506396 ZCCHC6Q5VYS8 1495 aaKnown RBP29.44■■■□□ 2.3
CDH6-203ENST00000506396 SCAF1Q9H7N4 1312 aaKnown RBP29.37■■■□□ 2.29
CDH6-203ENST00000506396 MYT1Q01538 1121 aa29.37■■■□□ 2.29
CDH6-203ENST00000506396 DCAF1Q9Y4B6 1507 aa29.1■■■□□ 2.25
CDH6-203ENST00000506396 LOC105371045A0A1W2PR82 267 aa28.93■■■□□ 2.22
CDH6-203ENST00000506396 CCDC180Q9P1Z9 1646 aa28.91■■■□□ 2.22
CDH6-203ENST00000506396 DCAF8L2P0C7V8 631 aa28.85■■■□□ 2.21
CDH6-203ENST00000506396 TRIM26Q12899 539 aaPredicted RBP28.8■■■□□ 2.2
CDH6-203ENST00000506396 ZEB1P37275 1124 aaPredicted RBP28.66■■■□□ 2.18
CDH6-203ENST00000506396 ACIN1Q9UKV3 1341 aaKnown RBP28.49■■■□□ 2.15
CDH6-203ENST00000506396 NEUROD1Q13562 356 aa28.39■■■□□ 2.14
CDH6-203ENST00000506396 GTF3C3Q9Y5Q9 886 aa28.31■■■□□ 2.12
CDH6-203ENST00000506396 CENPBP07199 599 aaPredicted RBP28.07■■■□□ 2.08
CDH6-203ENST00000506396 TRIM41Q8WV44 630 aa28■■■□□ 2.07
CDH6-203ENST00000506396 FAM9AQ8IZU1 332 aaPredicted RBP27.96■■■□□ 2.07
CDH6-203ENST00000506396 ABCC9O60706 1549 aa27.95■■■□□ 2.06
CDH6-203ENST00000506396 EHMT2Q96KQ7 1210 aa27.83■■■□□ 2.05
CDH6-203ENST00000506396 RSF1Q96T23 1441 aaPredicted RBP27.78■■■□□ 2.04
CDH6-203ENST00000506396 DIEXFQ68CQ4 756 aaKnown RBP27.73■■■□□ 2.03
CDH6-203ENST00000506396 RB1CC1Q8TDY2 1594 aa27.67■■■□□ 2.02
CDH6-203ENST00000506396 TTBK1Q5TCY1 1321 aaPredicted RBP27.66■■■□□ 2.02
CDH6-203ENST00000506396 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.62■■■□□ 2.01
CDH6-203ENST00000506396 CCER1Q8TC90 406 aaPredicted RBP27.57■■■□□ 2
CDH6-203ENST00000506396 SCRIBQ14160 1630 aa27.51■■□□□ 1.99
CDH6-203ENST00000506396 BCL11AQ9H165 835 aa27.48■■□□□ 1.99
CDH6-203ENST00000506396 YTHDC1Q96MU7 727 aaKnown RBP27.42■■□□□ 1.98
CDH6-203ENST00000506396 ANP32EQ9BTT0 268 aa27.15■■□□□ 1.94
CDH6-203ENST00000506396 CECR2Q9BXF3 1484 aa27.08■■□□□ 1.93
CDH6-203ENST00000506396 ZNF316A6NFI3 1004 aaPredicted RBP27.04■■□□□ 1.92
CDH6-203ENST00000506396 MROH2BQ7Z745 1585 aa27.04■■□□□ 1.92
CDH6-203ENST00000506396 MIER1Q8N108 512 aa26.97■■□□□ 1.91
CDH6-203ENST00000506396 WIZO95785 1651 aa26.95■■□□□ 1.9
CDH6-203ENST00000506396 WRNQ14191 1432 aaPredicted RBP eCLIP26.94■■□□□ 1.9
CDH6-203ENST00000506396 CSRNP3Q8WYN3 585 aa26.89■■□□□ 1.89
CDH6-203ENST00000506396 CEP162Q5TB80 1403 aa26.86■■□□□ 1.89
CDH6-203ENST00000506396 EIF4G1Q04637 1599 aaKnown RBP26.83■■□□□ 1.89
CDH6-203ENST00000506396 TSHZ2Q9NRE2 1034 aa26.82■■□□□ 1.88
CDH6-203ENST00000506396 SUPT16HQ9Y5B9 1047 aaKnown RBP26.8■■□□□ 1.88
CDH6-203ENST00000506396 BAZ1AQ9NRL2 1556 aaPredicted RBP26.76■■□□□ 1.87
CDH6-203ENST00000506396 CCDC88BA6NC98 1476 aa26.72■■□□□ 1.87
CDH6-203ENST00000506396 ABCC8Q09428 1581 aa26.72■■□□□ 1.87
CDH6-203ENST00000506396 PRKCSHP14314 528 aaPredicted RBP26.71■■□□□ 1.87
CDH6-203ENST00000506396 TNIKQ9UKE5 1360 aa26.68■■□□□ 1.86
CDH6-203ENST00000506396 CLSPNQ9HAW4 1339 aa26.65■■□□□ 1.86
CDH6-203ENST00000506396 SOGA1O94964 1423 aa26.62■■□□□ 1.85
CDH6-203ENST00000506396 UBTFP17480 764 aaKnown RBP26.6■■□□□ 1.85
CDH6-203ENST00000506396 NACADO15069 1562 aa26.59■■□□□ 1.85
CDH6-203ENST00000506396 HNRNPUL2Q1KMD3 747 aaKnown RBP26.55■■□□□ 1.84
CDH6-203ENST00000506396 RUSC2Q8N2Y8 1516 aa26.46■■□□□ 1.83
CDH6-203ENST00000506396 EEA1Q15075 1411 aa26.45■■□□□ 1.82
CDH6-203ENST00000506396 TOP2AP11388 1531 aaKnown RBP26.44■■□□□ 1.82
CDH6-203ENST00000506396 GOLGA3Q08378 1498 aa26.4■■□□□ 1.82
CDH6-203ENST00000506396 SMARCA2P51531 1590 aa26.36■■□□□ 1.81
CDH6-203ENST00000506396 BCANQ96GW7 911 aa26.23■■□□□ 1.79
CDH6-203ENST00000506396 SMARCA4P51532 1647 aa26.21■■□□□ 1.79
CDH6-203ENST00000506396 CLIP1P30622 1438 aa26.19■■□□□ 1.78
CDH6-203ENST00000506396 APLP2Q06481 763 aa26.16■■□□□ 1.78
CDH6-203ENST00000506396 CEP164Q9UPV0 1460 aa26.15■■□□□ 1.78
CDH6-203ENST00000506396 RBM19Q9Y4C8 960 aaKnown RBP26.15■■□□□ 1.78
CDH6-203ENST00000506396 VPS8Q8N3P4 1428 aa26.14■■□□□ 1.77
CDH6-203ENST00000506396 ERICH6Q7L0X2 663 aa26.11■■□□□ 1.77
CDH6-203ENST00000506396 KIF21BO75037 1637 aa26.06■■□□□ 1.76
CDH6-203ENST00000506396 RANGAP1P46060 587 aaPredicted RBP26.02■■□□□ 1.76
CDH6-203ENST00000506396 DHX57Q6P158 1386 aaKnown RBP26.01■■□□□ 1.75
CDH6-203ENST00000506396 FKBP8Q14318 412 aa26.01■■□□□ 1.75
CDH6-203ENST00000506396 MSH5O43196 834 aa25.96■■□□□ 1.75
CDH6-203ENST00000506396 SYNJ1O43426 1573 aa25.93■■□□□ 1.74
CDH6-203ENST00000506396 BAZ1BQ9UIG0 1483 aaKnown RBP25.91■■□□□ 1.74
CDH6-203ENST00000506396 RAPGEF2Q9Y4G8 1499 aa25.91■■□□□ 1.74
CDH6-203ENST00000506396 KCNH8Q96L42 1107 aa25.83■■□□□ 1.72
CDH6-203ENST00000506396 ITGAEP38570 1179 aa25.82■■□□□ 1.72
CDH6-203ENST00000506396 NEFLP07196 543 aa25.77■■□□□ 1.72
CDH6-203ENST00000506396 ANO8Q9HCE9 1232 aaPredicted RBP25.74■■□□□ 1.71
CDH6-203ENST00000506396 KANK4Q5T7N3 995 aaPredicted RBP25.71■■□□□ 1.71
CDH6-203ENST00000506396 UNC13AQ9UPW8 1703 aa25.71■■□□□ 1.71
CDH6-203ENST00000506396 DEKP35659 375 aaKnown RBP25.69■■□□□ 1.7
CDH6-203ENST00000506396 FANCIQ9NVI1 1328 aa25.65■■□□□ 1.7
CDH6-203ENST00000506396 MYT1LQ9UL68 1186 aa25.64■■□□□ 1.69
CDH6-203ENST00000506396 ARAP1Q96P48 1450 aa25.63■■□□□ 1.69
CDH6-203ENST00000506396 RRBP1Q9P2E9 1410 aaKnown RBP25.62■■□□□ 1.69
CDH6-203ENST00000506396 CUX2O14529 1486 aa25.56■■□□□ 1.68
CDH6-203ENST00000506396 PEG3Q9GZU2 1588 aa25.55■■□□□ 1.68
CDH6-203ENST00000506396 CCNB3Q8WWL7 1395 aa25.53■■□□□ 1.68
CDH6-203ENST00000506396 PABPN1Q86U42 306 aaKnown RBP eCLIP25.53■■□□□ 1.68
CDH6-203ENST00000506396 ERICH3Q5RHP9 1530 aa25.49■■□□□ 1.67
CDH6-203ENST00000506396 DDX10Q13206 875 aaKnown RBP25.49■■□□□ 1.67
CDH6-203ENST00000506396 TOP2BQ02880 1626 aa25.46■■□□□ 1.67
CDH6-203ENST00000506396 PRXQ9BXM0 1461 aa25.46■■□□□ 1.67
CDH6-203ENST00000506396 CDK11AQ9UQ88 783 aaPredicted RBP25.45■■□□□ 1.66
CDH6-203ENST00000506396 SALL2Q9Y467 1007 aaPredicted RBP25.44■■□□□ 1.66
CDH6-203ENST00000506396 RAB3GAP2Q9H2M9 1393 aa25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms