RNA–Protein interactions for RNA: ENST00000506334.1

ARHGEF28-207, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 4

Gene ARHGEF28, Length 536 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-207ENST00000506334 GAPVD1Q14C86 1478 aa14.45□□□□□ -0.1
ARHGEF28-207ENST00000506334 C1QBPQ07021 282 aaKnown RBP14.4□□□□□ -0.1
ARHGEF28-207ENST00000506334 NCBP3Q53F19 620 aaKnown RBP14.39□□□□□ -0.11
ARHGEF28-207ENST00000506334 CUX1P39880 1505 aa14.39□□□□□ -0.11
ARHGEF28-207ENST00000506334 ABCA10Q8WWZ4 1543 aa14.31□□□□□ -0.12
ARHGEF28-207ENST00000506334 GRIN2AQ12879 1464 aa14.28□□□□□ -0.12
ARHGEF28-207ENST00000506334 PBRM1Q86U86 1689 aa14.28□□□□□ -0.12
ARHGEF28-207ENST00000506334 ERCC6L2Q5T890 1561 aa14.27□□□□□ -0.12
ARHGEF28-207ENST00000506334 NUP160Q12769 1436 aa14.26□□□□□ -0.13
ARHGEF28-207ENST00000506334 ABCA5Q8WWZ7 1642 aa14.25□□□□□ -0.13
ARHGEF28-207ENST00000506334 CEP170Q5SW79 1584 aa14.24□□□□□ -0.13
ARHGEF28-207ENST00000506334 WRNQ14191 1432 aaPredicted RBP eCLIP14.24□□□□□ -0.13
ARHGEF28-207ENST00000506334 JPH4Q96JJ6 628 aa14.23□□□□□ -0.13
ARHGEF28-207ENST00000506334 NPM1P06748 294 aaKnown RBP eCLIP14.22□□□□□ -0.13
ARHGEF28-207ENST00000506334 FAM69CQ0P6D2 419 aa14.22□□□□□ -0.13
ARHGEF28-207ENST00000506334 FHAD1B1AJZ9 1412 aa14.22□□□□□ -0.13
ARHGEF28-207ENST00000506334 PRG4Q92954 1404 aaPredicted RBP14.18□□□□□ -0.14
ARHGEF28-207ENST00000506334 SHROOM2Q13796 1616 aa14.18□□□□□ -0.14
ARHGEF28-207ENST00000506334 ADAMTS12P58397 1594 aa14.15□□□□□ -0.14
ARHGEF28-207ENST00000506334 KIF13AQ9H1H9 1805 aa14.15□□□□□ -0.14
ARHGEF28-207ENST00000506334 ABCC10Q5T3U5 1492 aa14.14□□□□□ -0.15
ARHGEF28-207ENST00000506334 KDM4FA0A1W2PPD8 638 aa14.14□□□□□ -0.15
ARHGEF28-207ENST00000506334 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.14□□□□□ -0.15
ARHGEF28-207ENST00000506334 ERICH3Q5RHP9 1530 aa14.12□□□□□ -0.15
ARHGEF28-207ENST00000506334 NPM3O75607 178 aaKnown RBP14.08□□□□□ -0.16
ARHGEF28-207ENST00000506334 ILDR1Q86SU0 546 aaPredicted RBP14.07□□□□□ -0.16
ARHGEF28-207ENST00000506334 TOP2BQ02880 1626 aa14.07□□□□□ -0.16
ARHGEF28-207ENST00000506334 MAPKBP1O60336 1514 aa14.06□□□□□ -0.16
ARHGEF28-207ENST00000506334 SUPT5HO00267 1087 aaKnown RBP14.06□□□□□ -0.16
ARHGEF28-207ENST00000506334 BIVM-ERCC5R4GMW8 1640 aa14.04□□□□□ -0.16
ARHGEF28-207ENST00000506334 DIP2BQ9P265 1576 aa14□□□□□ -0.17
ARHGEF28-207ENST00000506334 KDM6BO15054 1643 aa13.99□□□□□ -0.17
ARHGEF28-207ENST00000506334 KIAA0586Q9BVV6 1533 aa13.98□□□□□ -0.17
ARHGEF28-207ENST00000506334 ADCY10Q96PN6 1610 aa13.97□□□□□ -0.17
ARHGEF28-207ENST00000506334 RUSC2Q8N2Y8 1516 aa13.95□□□□□ -0.18
ARHGEF28-207ENST00000506334 PTPRGP23470 1445 aa13.95□□□□□ -0.18
ARHGEF28-207ENST00000506334 IGF1RP08069 1367 aa13.95□□□□□ -0.18
ARHGEF28-207ENST00000506334 TSPOAP1O95153 1857 aa13.92□□□□□ -0.18
ARHGEF28-207ENST00000506334 TTBK1Q5TCY1 1321 aaPredicted RBP13.9□□□□□ -0.19
ARHGEF28-207ENST00000506334 PLB1Q6P1J6 1458 aa13.88□□□□□ -0.19
ARHGEF28-207ENST00000506334 TNIKQ9UKE5 1360 aa13.88□□□□□ -0.19
ARHGEF28-207ENST00000506334 CARMIL2Q6F5E8 1435 aa13.87□□□□□ -0.19
ARHGEF28-207ENST00000506334 ABCC2Q92887 1545 aa13.86□□□□□ -0.19
ARHGEF28-207ENST00000506334 ASXL2Q76L83 1435 aa13.86□□□□□ -0.19
ARHGEF28-207ENST00000506334 KIF27Q86VH2 1401 aa13.86□□□□□ -0.19
ARHGEF28-207ENST00000506334 GLI2P10070 1586 aa13.85□□□□□ -0.19
ARHGEF28-207ENST00000506334 ADGRL1O94910 1474 aa13.84□□□□□ -0.19
ARHGEF28-207ENST00000506334 CARMIL1Q5VZK9 1371 aa13.83□□□□□ -0.19
ARHGEF28-207ENST00000506334 UHRF1BP1LA0JNW5 1464 aa13.82□□□□□ -0.2
ARHGEF28-207ENST00000506334 UACAQ9BZF9 1416 aa13.81□□□□□ -0.2
ARHGEF28-207ENST00000506334 COL17A1Q9UMD9 1497 aaPredicted RBP13.8□□□□□ -0.2
ARHGEF28-207ENST00000506334 CUL7Q14999 1698 aa13.8□□□□□ -0.2
ARHGEF28-207ENST00000506334 PPRC1Q5VV67 1664 aaKnown RBP13.78□□□□□ -0.2
ARHGEF28-207ENST00000506334 EPRSP07814 1512 aaKnown RBP13.76□□□□□ -0.21
ARHGEF28-207ENST00000506334 TEX14Q8IWB6 1497 aa13.76□□□□□ -0.21
ARHGEF28-207ENST00000506334 U3KPZ7 1027 aaPredicted RBP13.75□□□□□ -0.21
ARHGEF28-207ENST00000506334 KDM5BQ9UGL1 1544 aa13.74□□□□□ -0.21
ARHGEF28-207ENST00000506334 HECW2Q9P2P5 1572 aa13.72□□□□□ -0.21
ARHGEF28-207ENST00000506334 DISP1Q96F81 1524 aa13.71□□□□□ -0.21
ARHGEF28-207ENST00000506334 FBXO41Q8TF61 875 aa13.71□□□□□ -0.21
ARHGEF28-207ENST00000506334 MAP3K4Q9Y6R4 1608 aa13.71□□□□□ -0.22
ARHGEF28-207ENST00000506334 IQGAP2Q13576 1575 aa13.71□□□□□ -0.22
ARHGEF28-207ENST00000506334 KCNA4P22459 653 aa13.69□□□□□ -0.22
ARHGEF28-207ENST00000506334 KCNH8Q96L42 1107 aa13.67□□□□□ -0.22
ARHGEF28-207ENST00000506334 CAPN15O75808 1086 aa13.66□□□□□ -0.22
ARHGEF28-207ENST00000506334 CD109Q6YHK3 1445 aa13.65□□□□□ -0.22
ARHGEF28-207ENST00000506334 UGGT2Q9NYU1 1516 aa13.64□□□□□ -0.23
ARHGEF28-207ENST00000506334 WDR7Q9Y4E6 1490 aa13.64□□□□□ -0.23
ARHGEF28-207ENST00000506334 ZCCHC11Q5TAX3 1644 aaKnown RBP13.64□□□□□ -0.23
ARHGEF28-207ENST00000506334 MAGI3Q5TCQ9 1506 aa13.64□□□□□ -0.23
ARHGEF28-207ENST00000506334 RAPGEF2Q9Y4G8 1499 aa13.62□□□□□ -0.23
ARHGEF28-207ENST00000506334 SPINK5Q9NQ38 1064 aaPredicted RBP13.6□□□□□ -0.23
ARHGEF28-207ENST00000506334 FAM9AQ8IZU1 332 aaPredicted RBP13.59□□□□□ -0.23
ARHGEF28-207ENST00000506334 DSG3P32926 999 aa13.58□□□□□ -0.24
ARHGEF28-207ENST00000506334 KIAA0556O60303 1618 aa13.57□□□□□ -0.24
ARHGEF28-207ENST00000506334 PHLDB1Q86UU1 1377 aa13.56□□□□□ -0.24
ARHGEF28-207ENST00000506334 ARAP3Q8WWN8 1544 aa13.55□□□□□ -0.24
ARHGEF28-207ENST00000506334 CFAP43Q8NDM7 1665 aa13.55□□□□□ -0.24
ARHGEF28-207ENST00000506334 GOLGA3Q08378 1498 aa13.55□□□□□ -0.24
ARHGEF28-207ENST00000506334 ABCA8O94911 1581 aa13.5□□□□□ -0.25
ARHGEF28-207ENST00000506334 PTPRMP28827 1452 aa13.5□□□□□ -0.25
ARHGEF28-207ENST00000506334 APLP2Q06481 763 aa13.5□□□□□ -0.25
ARHGEF28-207ENST00000506334 RAPGEF3O95398 923 aa13.49□□□□□ -0.25
ARHGEF28-207ENST00000506334 KIF21BO75037 1637 aa13.48□□□□□ -0.25
ARHGEF28-207ENST00000506334 ARID4BQ4LE39 1312 aaPredicted RBP13.47□□□□□ -0.25
ARHGEF28-207ENST00000506334 SLC4A2P04920 1241 aa13.47□□□□□ -0.25
ARHGEF28-207ENST00000506334 ATP10BO94823 1461 aa13.46□□□□□ -0.25
ARHGEF28-207ENST00000506334 ADAMTSL3P82987 1691 aa13.46□□□□□ -0.26
ARHGEF28-207ENST00000506334 ARID3CA6NKF2 412 aa13.45□□□□□ -0.26
ARHGEF28-207ENST00000506334 P3H3Q8IVL6 736 aa13.43□□□□□ -0.26
ARHGEF28-207ENST00000506334 NEO1Q92859 1461 aa13.42□□□□□ -0.26
ARHGEF28-207ENST00000506334 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.41□□□□□ -0.26
ARHGEF28-207ENST00000506334 HNRNPUL2Q1KMD3 747 aaKnown RBP13.41□□□□□ -0.26
ARHGEF28-207ENST00000506334 CERKQ8TCT0 537 aa13.4□□□□□ -0.26
ARHGEF28-207ENST00000506334 CTTNBP2Q8WZ74 1663 aa13.4□□□□□ -0.26
ARHGEF28-207ENST00000506334 ZNF219Q9P2Y4 722 aaPredicted RBP13.39□□□□□ -0.27
ARHGEF28-207ENST00000506334 PRXQ9BXM0 1461 aa13.39□□□□□ -0.27
ARHGEF28-207ENST00000506334 PCF11O94913 1555 aaKnown RBP13.39□□□□□ -0.27
ARHGEF28-207ENST00000506334 ABCA9Q8IUA7 1624 aa13.39□□□□□ -0.27
ARHGEF28-207ENST00000506334 LMTK3Q96Q04 1460 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms