RNA–Protein interactions for RNA: ENST00000506270.1

SSX8-201, Transcript of Protein SSX8, humanhuman

BASIC

Gene SSX8, Length 579 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX8-201ENST00000506270 MIER1Q8N108 512 aa10.87□□□□□ -0.67
SSX8-201ENST00000506270 DHX57Q6P158 1386 aaKnown RBP10.87□□□□□ -0.67
SSX8-201ENST00000506270 CUX1P39880 1505 aa10.86□□□□□ -0.67
SSX8-201ENST00000506270 NCAPD3P42695 1498 aa10.86□□□□□ -0.67
SSX8-201ENST00000506270 MAP3K1Q13233 1512 aa10.84□□□□□ -0.67
SSX8-201ENST00000506270 YTHDC1Q96MU7 727 aaKnown RBP10.83□□□□□ -0.68
SSX8-201ENST00000506270 SLC4A1APQ9BWU0 796 aaKnown RBP10.8□□□□□ -0.68
SSX8-201ENST00000506270 CFTRP13569 1480 aa10.8□□□□□ -0.68
SSX8-201ENST00000506270 CCNB3Q8WWL7 1395 aa10.78□□□□□ -0.68
SSX8-201ENST00000506270 ARHGAP35Q9NRY4 1499 aa10.78□□□□□ -0.68
SSX8-201ENST00000506270 TIAM1Q13009 1591 aa10.77□□□□□ -0.69
SSX8-201ENST00000506270 CFAP43Q8NDM7 1665 aa10.76□□□□□ -0.69
SSX8-201ENST00000506270 RNF216Q9NWF9 866 aaPredicted RBP10.73□□□□□ -0.69
SSX8-201ENST00000506270 RANGAP1P46060 587 aaPredicted RBP10.72□□□□□ -0.69
SSX8-201ENST00000506270 KANK4Q5T7N3 995 aaPredicted RBP10.72□□□□□ -0.69
SSX8-201ENST00000506270 FHAD1B1AJZ9 1412 aa10.7□□□□□ -0.7
SSX8-201ENST00000506270 MAPKBP1O60336 1514 aa10.69□□□□□ -0.7
SSX8-201ENST00000506270 AMER1Q5JTC6 1135 aaPredicted RBP10.69□□□□□ -0.7
SSX8-201ENST00000506270 LRRC9Q6ZRR7 1453 aa10.68□□□□□ -0.7
SSX8-201ENST00000506270 SETD5Q9C0A6 1442 aa10.67□□□□□ -0.7
SSX8-201ENST00000506270 RTN4Q9NQC3 1192 aaKnown RBP10.67□□□□□ -0.7
SSX8-201ENST00000506270 EFCAB5A4FU69 1503 aa10.67□□□□□ -0.7
SSX8-201ENST00000506270 RAB3GAP2Q9H2M9 1393 aa10.66□□□□□ -0.7
SSX8-201ENST00000506270 PCF11O94913 1555 aaKnown RBP10.65□□□□□ -0.71
SSX8-201ENST00000506270 IGF1RP08069 1367 aa10.65□□□□□ -0.71
SSX8-201ENST00000506270 AQRO60306 1485 aaKnown RBP eCLIP10.64□□□□□ -0.71
SSX8-201ENST00000506270 TIMELESSQ9UNS1 1208 aa10.64□□□□□ -0.71
SSX8-201ENST00000506270 SUPT16HQ9Y5B9 1047 aaKnown RBP10.64□□□□□ -0.71
SSX8-201ENST00000506270 CC2D2AQ9P2K1 1620 aa10.64□□□□□ -0.71
SSX8-201ENST00000506270 CARMIL1Q5VZK9 1371 aa10.64□□□□□ -0.71
SSX8-201ENST00000506270 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.64□□□□□ -0.71
SSX8-201ENST00000506270 CUL7Q14999 1698 aa10.63□□□□□ -0.71
SSX8-201ENST00000506270 FGD5Q6ZNL6 1462 aa10.63□□□□□ -0.71
SSX8-201ENST00000506270 FYCO1Q9BQS8 1478 aa10.63□□□□□ -0.71
SSX8-201ENST00000506270 CADPSQ9ULU8 1353 aa10.62□□□□□ -0.71
SSX8-201ENST00000506270 CTTNBP2Q8WZ74 1663 aa10.61□□□□□ -0.71
SSX8-201ENST00000506270 DNMBPQ6XZF7 1577 aa10.6□□□□□ -0.71
SSX8-201ENST00000506270 CNKSR2Q8WXI2 1034 aa10.59□□□□□ -0.71
SSX8-201ENST00000506270 PHLDB1Q86UU1 1377 aa10.58□□□□□ -0.72
SSX8-201ENST00000506270 WDR97A6NE52 1622 aa10.58□□□□□ -0.72
SSX8-201ENST00000506270 CASKIN1Q8WXD9 1431 aa10.58□□□□□ -0.72
SSX8-201ENST00000506270 THOC2Q8NI27 1593 aaKnown RBP10.56□□□□□ -0.72
SSX8-201ENST00000506270 PPP4R3CPQ6ZMV5 832 aa10.56□□□□□ -0.72
SSX8-201ENST00000506270 ABCA10Q8WWZ4 1543 aa10.56□□□□□ -0.72
SSX8-201ENST00000506270 KIF21AQ7Z4S6 1674 aa10.56□□□□□ -0.72
SSX8-201ENST00000506270 ITGAEP38570 1179 aa10.54□□□□□ -0.72
SSX8-201ENST00000506270 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.54□□□□□ -0.72
SSX8-201ENST00000506270 FMN1Q68DA7 1419 aa10.53□□□□□ -0.72
SSX8-201ENST00000506270 CCER2I3L3R5 266 aa10.53□□□□□ -0.72
SSX8-201ENST00000506270 FANCD2Q9BXW9 1451 aa10.53□□□□□ -0.72
SSX8-201ENST00000506270 DSG3P32926 999 aa10.51□□□□□ -0.73
SSX8-201ENST00000506270 FGD6Q6ZV73 1430 aa10.5□□□□□ -0.73
SSX8-201ENST00000506270 FAM50AQ14320 339 aaKnown RBP10.5□□□□□ -0.73
SSX8-201ENST00000506270 TSHZ2Q9NRE2 1034 aa10.5□□□□□ -0.73
SSX8-201ENST00000506270 SAMD9Q5K651 1589 aa10.5□□□□□ -0.73
SSX8-201ENST00000506270 FHOD3Q2V2M9 1422 aa10.5□□□□□ -0.73
SSX8-201ENST00000506270 CCDC18Q5T9S5 1454 aa10.49□□□□□ -0.73
SSX8-201ENST00000506270 EHBP1L1Q8N3D4 1523 aa10.49□□□□□ -0.73
SSX8-201ENST00000506270 TOPBP1Q92547 1522 aa10.49□□□□□ -0.73
SSX8-201ENST00000506270 PTPN23Q9H3S7 1636 aa10.49□□□□□ -0.73
SSX8-201ENST00000506270 UACAQ9BZF9 1416 aa10.49□□□□□ -0.73
SSX8-201ENST00000506270 SNAPC4Q5SXM2 1469 aa10.49□□□□□ -0.73
SSX8-201ENST00000506270 SUPT6HQ7KZ85 1726 aaKnown RBP10.48□□□□□ -0.73
SSX8-201ENST00000506270 PPP1R15AO75807 674 aaPredicted RBP10.48□□□□□ -0.73
SSX8-201ENST00000506270 NEFLP07196 543 aa10.48□□□□□ -0.73
SSX8-201ENST00000506270 HFM1A2PYH4 1435 aa10.48□□□□□ -0.73
SSX8-201ENST00000506270 POLA1P09884 1462 aaPredicted RBP10.48□□□□□ -0.73
SSX8-201ENST00000506270 ANP32CO43423 234 aa10.46□□□□□ -0.73
SSX8-201ENST00000506270 TONSLQ96HA7 1378 aa10.46□□□□□ -0.74
SSX8-201ENST00000506270 ABCA5Q8WWZ7 1642 aa10.46□□□□□ -0.74
SSX8-201ENST00000506270 GCC2Q8IWJ2 1684 aa10.46□□□□□ -0.74
SSX8-201ENST00000506270 HECW1Q76N89 1606 aa10.45□□□□□ -0.74
SSX8-201ENST00000506270 DDX10Q13206 875 aaKnown RBP10.44□□□□□ -0.74
SSX8-201ENST00000506270 SIN3AQ96ST3 1273 aa10.44□□□□□ -0.74
SSX8-201ENST00000506270 GRIN2BQ13224 1484 aa10.43□□□□□ -0.74
SSX8-201ENST00000506270 MYOM3Q5VTT5 1437 aa10.43□□□□□ -0.74
SSX8-201ENST00000506270 MTUS2Q5JR59 1369 aa10.43□□□□□ -0.74
SSX8-201ENST00000506270 ANP32EQ9BTT0 268 aa10.43□□□□□ -0.74
SSX8-201ENST00000506270 LAMC3Q9Y6N6 1575 aa10.43□□□□□ -0.74
SSX8-201ENST00000506270 RAD54L2Q9Y4B4 1467 aa10.42□□□□□ -0.74
SSX8-201ENST00000506270 AKNAQ7Z591 1439 aa10.42□□□□□ -0.74
SSX8-201ENST00000506270 LRRIQ1Q96JM4 1722 aa10.42□□□□□ -0.74
SSX8-201ENST00000506270 UGGT2Q9NYU1 1516 aa10.42□□□□□ -0.74
SSX8-201ENST00000506270 NCOA2Q15596 1464 aa10.42□□□□□ -0.74
SSX8-201ENST00000506270 FKBP8Q14318 412 aa10.41□□□□□ -0.74
SSX8-201ENST00000506270 ARHGEF11O15085 1522 aa10.41□□□□□ -0.74
SSX8-201ENST00000506270 TCOF1Q13428 1488 aaKnown RBP10.41□□□□□ -0.74
SSX8-201ENST00000506270 KCNH8Q96L42 1107 aa10.4□□□□□ -0.74
SSX8-201ENST00000506270 ATP1B4Q9UN42 357 aaPredicted RBP10.39□□□□□ -0.75
SSX8-201ENST00000506270 NAIPQ13075 1403 aa10.39□□□□□ -0.75
SSX8-201ENST00000506270 P3H3Q8IVL6 736 aa10.38□□□□□ -0.75
SSX8-201ENST00000506270 KDM5BQ9UGL1 1544 aa10.38□□□□□ -0.75
SSX8-201ENST00000506270 ZBTB22O15209 634 aa10.37□□□□□ -0.75
SSX8-201ENST00000506270 CAPN15O75808 1086 aa10.37□□□□□ -0.75
SSX8-201ENST00000506270 GAPVD1Q14C86 1478 aa10.36□□□□□ -0.75
SSX8-201ENST00000506270 PTPRKQ15262 1439 aa10.35□□□□□ -0.75
SSX8-201ENST00000506270 URB2Q14146 1524 aaKnown RBP10.35□□□□□ -0.75
SSX8-201ENST00000506270 NCBP3Q53F19 620 aaKnown RBP10.35□□□□□ -0.75
SSX8-201ENST00000506270 SP7Q8TDD2 431 aaPredicted RBP10.35□□□□□ -0.75
SSX8-201ENST00000506270 BCANQ96GW7 911 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms