RNA–Protein interactions for RNA: ENST00000505552.1

ITGA3-205, Transcript of integrin subunit alpha 3, humanhuman

TSL 2

Gene ITGA3, Length 600 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-205ENST00000505552 MAGI1Q96QZ7 1491 aaPredicted RBP9.19□□□□□ -0.94
ITGA3-205ENST00000505552 CTTNBP2Q8WZ74 1663 aa9.16□□□□□ -0.94
ITGA3-205ENST00000505552 SYNJ2O15056 1496 aa9.15□□□□□ -0.94
ITGA3-205ENST00000505552 GRIN2AQ12879 1464 aa9.15□□□□□ -0.94
ITGA3-205ENST00000505552 ARAP1Q96P48 1450 aa9.15□□□□□ -0.95
ITGA3-205ENST00000505552 ARHGAP35Q9NRY4 1499 aa9.15□□□□□ -0.95
ITGA3-205ENST00000505552 UBTFP17480 764 aaKnown RBP9.14□□□□□ -0.95
ITGA3-205ENST00000505552 CLIP1P30622 1438 aa9.14□□□□□ -0.95
ITGA3-205ENST00000505552 NUP160Q12769 1436 aa9.14□□□□□ -0.95
ITGA3-205ENST00000505552 CEP170Q5SW79 1584 aa9.13□□□□□ -0.95
ITGA3-205ENST00000505552 SAMD9Q5K651 1589 aa9.12□□□□□ -0.95
ITGA3-205ENST00000505552 CHD1O14646 1710 aa9.11□□□□□ -0.95
ITGA3-205ENST00000505552 KIAA0586Q9BVV6 1533 aa9.1□□□□□ -0.95
ITGA3-205ENST00000505552 UGGT2Q9NYU1 1516 aa9.09□□□□□ -0.95
ITGA3-205ENST00000505552 IQGAP2Q13576 1575 aa9.08□□□□□ -0.96
ITGA3-205ENST00000505552 ADRA2BP18089 450 aa9.08□□□□□ -0.96
ITGA3-205ENST00000505552 VPS8Q8N3P4 1428 aa9.07□□□□□ -0.96
ITGA3-205ENST00000505552 EFCAB5A4FU69 1503 aa9.07□□□□□ -0.96
ITGA3-205ENST00000505552 DISP1Q96F81 1524 aa9.06□□□□□ -0.96
ITGA3-205ENST00000505552 SHROOM2Q13796 1616 aa9.05□□□□□ -0.96
ITGA3-205ENST00000505552 CLASP1Q7Z460 1538 aa9.05□□□□□ -0.96
ITGA3-205ENST00000505552 CHMP7Q8WUX9 453 aaPredicted RBP9.03□□□□□ -0.96
ITGA3-205ENST00000505552 FHOD3Q2V2M9 1422 aa9.03□□□□□ -0.96
ITGA3-205ENST00000505552 KIAA0556O60303 1618 aa9.02□□□□□ -0.96
ITGA3-205ENST00000505552 LRRIQ1Q96JM4 1722 aa9□□□□□ -0.97
ITGA3-205ENST00000505552 PCF11O94913 1555 aaKnown RBP8.99□□□□□ -0.97
ITGA3-205ENST00000505552 RANGAP1P46060 587 aaPredicted RBP8.99□□□□□ -0.97
ITGA3-205ENST00000505552 ERCC6L2Q5T890 1561 aa8.98□□□□□ -0.97
ITGA3-205ENST00000505552 CASKIN1Q8WXD9 1431 aa8.97□□□□□ -0.97
ITGA3-205ENST00000505552 MAP3K1Q13233 1512 aa8.97□□□□□ -0.97
ITGA3-205ENST00000505552 FBLN2P98095 1184 aa8.97□□□□□ -0.97
ITGA3-205ENST00000505552 ILDR1Q86SU0 546 aaPredicted RBP8.97□□□□□ -0.97
ITGA3-205ENST00000505552 JPH4Q96JJ6 628 aa8.97□□□□□ -0.97
ITGA3-205ENST00000505552 P3H3Q8IVL6 736 aa8.96□□□□□ -0.98
ITGA3-205ENST00000505552 FYCO1Q9BQS8 1478 aa8.96□□□□□ -0.98
ITGA3-205ENST00000505552 CFAP43Q8NDM7 1665 aa8.95□□□□□ -0.98
ITGA3-205ENST00000505552 FMN1Q68DA7 1419 aa8.95□□□□□ -0.98
ITGA3-205ENST00000505552 TIAM1Q13009 1591 aa8.95□□□□□ -0.98
ITGA3-205ENST00000505552 PRG4Q92954 1404 aaPredicted RBP8.94□□□□□ -0.98
ITGA3-205ENST00000505552 ABCA8O94911 1581 aa8.93□□□□□ -0.98
ITGA3-205ENST00000505552 KANK4Q5T7N3 995 aaPredicted RBP8.92□□□□□ -0.98
ITGA3-205ENST00000505552 PIAS4Q8N2W9 510 aaPredicted RBP8.92□□□□□ -0.98
ITGA3-205ENST00000505552 MAGI3Q5TCQ9 1506 aa8.91□□□□□ -0.98
ITGA3-205ENST00000505552 NUP153P49790 1475 aaKnown RBP8.91□□□□□ -0.98
ITGA3-205ENST00000505552 RAPGEF6Q8TEU7 1601 aa8.91□□□□□ -0.98
ITGA3-205ENST00000505552 PPARGC1BQ86YN6 1023 aaKnown RBP8.9□□□□□ -0.98
ITGA3-205ENST00000505552 PLB1Q6P1J6 1458 aa8.89□□□□□ -0.99
ITGA3-205ENST00000505552 CARMIL2Q6F5E8 1435 aa8.89□□□□□ -0.99
ITGA3-205ENST00000505552 MSH5O43196 834 aa8.89□□□□□ -0.99
ITGA3-205ENST00000505552 HECW1Q76N89 1606 aa8.89□□□□□ -0.99
ITGA3-205ENST00000505552 EPRSP07814 1512 aaKnown RBP8.89□□□□□ -0.99
ITGA3-205ENST00000505552 LRRC9Q6ZRR7 1453 aa8.89□□□□□ -0.99
ITGA3-205ENST00000505552 ARHGEF11O15085 1522 aa8.87□□□□□ -0.99
ITGA3-205ENST00000505552 CDK13Q14004 1512 aaKnown RBP8.87□□□□□ -0.99
ITGA3-205ENST00000505552 OSCARQ8IYS5 282 aa8.86□□□□□ -0.99
ITGA3-205ENST00000505552 CCDC18Q5T9S5 1454 aa8.85□□□□□ -0.99
ITGA3-205ENST00000505552 PTPRGP23470 1445 aa8.85□□□□□ -0.99
ITGA3-205ENST00000505552 ATP10BO94823 1461 aa8.84□□□□□ -0.99
ITGA3-205ENST00000505552 UHRF1BP1LA0JNW5 1464 aa8.83□□□□□ -1
ITGA3-205ENST00000505552 TRIM26Q12899 539 aaPredicted RBP8.83□□□□□ -1
ITGA3-205ENST00000505552 ABCC2Q92887 1545 aa8.83□□□□□ -1
ITGA3-205ENST00000505552 UACAQ9BZF9 1416 aa8.82□□□□□ -1
ITGA3-205ENST00000505552 RRBP1Q9P2E9 1410 aaKnown RBP8.82□□□□□ -1
ITGA3-205ENST00000505552 EHBP1L1Q8N3D4 1523 aa8.82□□□□□ -1
ITGA3-205ENST00000505552 PHLDB1Q86UU1 1377 aa8.82□□□□□ -1
ITGA3-205ENST00000505552 ADCY10Q96PN6 1610 aa8.81□□□□□ -1
ITGA3-205ENST00000505552 KDM5BQ9UGL1 1544 aa8.8□□□□□ -1
ITGA3-205ENST00000505552 NCOA2Q15596 1464 aa8.79□□□□□ -1
ITGA3-205ENST00000505552 SUPT6HQ7KZ85 1726 aaKnown RBP8.78□□□□□ -1
ITGA3-205ENST00000505552 APLP2Q06481 763 aa8.78□□□□□ -1
ITGA3-205ENST00000505552 PCGF6Q9BYE7 350 aa8.78□□□□□ -1
ITGA3-205ENST00000505552 TROQ12816 1431 aaPredicted RBP8.78□□□□□ -1
ITGA3-205ENST00000505552 TTBK1Q5TCY1 1321 aaPredicted RBP8.78□□□□□ -1
ITGA3-205ENST00000505552 ABCC10Q5T3U5 1492 aa8.77□□□□□ -1
ITGA3-205ENST00000505552 RIMBP3CA6NJZ7 1639 aa8.77□□□□□ -1.01
ITGA3-205ENST00000505552 RIMBP3BA6NNM3 1639 aa8.77□□□□□ -1.01
ITGA3-205ENST00000505552 KIF14Q15058 1648 aa8.77□□□□□ -1.01
ITGA3-205ENST00000505552 ZCCHC11Q5TAX3 1644 aaKnown RBP8.77□□□□□ -1.01
ITGA3-205ENST00000505552 RIMBP3Q9UFD9 1639 aa8.77□□□□□ -1.01
ITGA3-205ENST00000505552 ATP1B4Q9UN42 357 aaPredicted RBP8.75□□□□□ -1.01
ITGA3-205ENST00000505552 MTUS2Q5JR59 1369 aa8.74□□□□□ -1.01
ITGA3-205ENST00000505552 MYOM3Q5VTT5 1437 aa8.74□□□□□ -1.01
ITGA3-205ENST00000505552 ARID3CA6NKF2 412 aa8.74□□□□□ -1.01
ITGA3-205ENST00000505552 TCOF1Q13428 1488 aaKnown RBP8.74□□□□□ -1.01
ITGA3-205ENST00000505552 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.73□□□□□ -1.01
ITGA3-205ENST00000505552 FGD6Q6ZV73 1430 aa8.73□□□□□ -1.01
ITGA3-205ENST00000505552 CCNB3Q8WWL7 1395 aa8.73□□□□□ -1.01
ITGA3-205ENST00000505552 CDC42BPAQ5VT25 1732 aa8.72□□□□□ -1.01
ITGA3-205ENST00000505552 GPATCH8Q9UKJ3 1502 aaKnown RBP8.72□□□□□ -1.01
ITGA3-205ENST00000505552 PTPRKQ15262 1439 aa8.71□□□□□ -1.02
ITGA3-205ENST00000505552 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.7□□□□□ -1.02
ITGA3-205ENST00000505552 TTC37Q6PGP7 1564 aa8.7□□□□□ -1.02
ITGA3-205ENST00000505552 PTPN23Q9H3S7 1636 aa8.7□□□□□ -1.02
ITGA3-205ENST00000505552 MIA2Q96PC5 1412 aa8.7□□□□□ -1.02
ITGA3-205ENST00000505552 CDC42BPBQ9Y5S2 1711 aa8.69□□□□□ -1.02
ITGA3-205ENST00000505552 PREX2Q70Z35 1606 aa8.68□□□□□ -1.02
ITGA3-205ENST00000505552 PLEKHD1A6NEE1 506 aa8.67□□□□□ -1.02
ITGA3-205ENST00000505552 ITSN2Q9NZM3 1697 aa8.67□□□□□ -1.02
ITGA3-205ENST00000505552 CDK11AQ9UQ88 783 aaPredicted RBP8.67□□□□□ -1.02
ITGA3-205ENST00000505552 WDR7Q9Y4E6 1490 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms