RNA–Protein interactions for RNA: ENST00000505117.5

CASP6-204, Transcript of caspase 6, humanhuman

TSL 2

Gene CASP6, Length 774 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP6-204ENST00000505117 SMARCA4P51532 1647 aa14.49□□□□□ -0.09
CASP6-204ENST00000505117 LAMC3Q9Y6N6 1575 aa14.48□□□□□ -0.09
CASP6-204ENST00000505117 NESP48681 1621 aa14.45□□□□□ -0.1
CASP6-204ENST00000505117 FARP1Q9Y4F1 1045 aaPredicted RBP14.45□□□□□ -0.1
CASP6-204ENST00000505117 EHMT2Q96KQ7 1210 aa14.43□□□□□ -0.1
CASP6-204ENST00000505117 BAZ1AQ9NRL2 1556 aaPredicted RBP14.43□□□□□ -0.1
CASP6-204ENST00000505117 CD44P16070 742 aaKnown RBP14.41□□□□□ -0.1
CASP6-204ENST00000505117 BAZ1BQ9UIG0 1483 aaKnown RBP14.37□□□□□ -0.11
CASP6-204ENST00000505117 MROH2BQ7Z745 1585 aa14.36□□□□□ -0.11
CASP6-204ENST00000505117 LHX8Q68G74 356 aa14.36□□□□□ -0.11
CASP6-204ENST00000505117 KIF21AQ7Z4S6 1674 aa14.34□□□□□ -0.11
CASP6-204ENST00000505117 POTEIP0CG38 1075 aa14.33□□□□□ -0.12
CASP6-204ENST00000505117 PDS5BQ9NTI5 1447 aa14.32□□□□□ -0.12
CASP6-204ENST00000505117 WDR62O43379 1518 aa14.27□□□□□ -0.12
CASP6-204ENST00000505117 CREBZFQ9NS37 354 aa14.27□□□□□ -0.13
CASP6-204ENST00000505117 CLCN6P51797 869 aa14.24□□□□□ -0.13
CASP6-204ENST00000505117 WIZO95785 1651 aa14.23□□□□□ -0.13
CASP6-204ENST00000505117 MRC2Q9UBG0 1479 aa14.22□□□□□ -0.13
CASP6-204ENST00000505117 STAG3Q9UJ98 1225 aa14.21□□□□□ -0.13
CASP6-204ENST00000505117 CADPSQ9ULU8 1353 aa14.21□□□□□ -0.14
CASP6-204ENST00000505117 ZNF579Q8NAF0 562 aaKnown RBP14.2□□□□□ -0.14
CASP6-204ENST00000505117 RSF1Q96T23 1441 aaPredicted RBP14.19□□□□□ -0.14
CASP6-204ENST00000505117 SPDYE4A6NLX3 237 aa14.18□□□□□ -0.14
CASP6-204ENST00000505117 ZRANB1Q9UGI0 708 aa14.16□□□□□ -0.14
CASP6-204ENST00000505117 TRIM41Q8WV44 630 aa14.15□□□□□ -0.14
CASP6-204ENST00000505117 DCBLD2Q96PD2 775 aa14.09□□□□□ -0.15
CASP6-204ENST00000505117 CEP164Q9UPV0 1460 aa14.06□□□□□ -0.16
CASP6-204ENST00000505117 TOP2AP11388 1531 aaKnown RBP14.06□□□□□ -0.16
CASP6-204ENST00000505117 GALR2O43603 387 aaPredicted RBP14.06□□□□□ -0.16
CASP6-204ENST00000505117 CFTRP13569 1480 aa14.03□□□□□ -0.16
CASP6-204ENST00000505117 MNX1P50219 401 aaPredicted RBP14.02□□□□□ -0.17
CASP6-204ENST00000505117 FANCD2Q9BXW9 1451 aa14.01□□□□□ -0.17
CASP6-204ENST00000505117 PHF12Q96QT6 1004 aa13.97□□□□□ -0.17
CASP6-204ENST00000505117 RIMBP3CA6NJZ7 1639 aa13.96□□□□□ -0.17
CASP6-204ENST00000505117 RIMBP3BA6NNM3 1639 aa13.96□□□□□ -0.17
CASP6-204ENST00000505117 RIMBP3Q9UFD9 1639 aa13.96□□□□□ -0.17
CASP6-204ENST00000505117 PAK3O75914 559 aaPredicted RBP13.94□□□□□ -0.18
CASP6-204ENST00000505117 URB2Q14146 1524 aaKnown RBP13.94□□□□□ -0.18
CASP6-204ENST00000505117 PRDM2Q13029 1718 aa13.92□□□□□ -0.18
CASP6-204ENST00000505117 NPM1P06748 294 aaKnown RBP eCLIP13.91□□□□□ -0.18
CASP6-204ENST00000505117 ARHGEF11O15085 1522 aa13.89□□□□□ -0.19
CASP6-204ENST00000505117 PROM2Q8N271 834 aa13.88□□□□□ -0.19
CASP6-204ENST00000505117 CCDC88BA6NC98 1476 aa13.87□□□□□ -0.19
CASP6-204ENST00000505117 POTEB2H3BUK9 544 aa13.86□□□□□ -0.19
CASP6-204ENST00000505117 IFT140Q96RY7 1462 aa13.85□□□□□ -0.19
CASP6-204ENST00000505117 OTUD5Q96G74 571 aa13.83□□□□□ -0.2
CASP6-204ENST00000505117 PELP1Q8IZL8 1130 aaKnown RBP13.82□□□□□ -0.2
CASP6-204ENST00000505117 SUPT5HO00267 1087 aaKnown RBP13.79□□□□□ -0.2
CASP6-204ENST00000505117 MS4A3Q96HJ5 214 aa13.78□□□□□ -0.2
CASP6-204ENST00000505117 ABCC8Q09428 1581 aa13.77□□□□□ -0.21
CASP6-204ENST00000505117 ZNF608Q9ULD9 1512 aaPredicted RBP13.77□□□□□ -0.21
CASP6-204ENST00000505117 ASTLQ6HA08 431 aaPredicted RBP13.75□□□□□ -0.21
CASP6-204ENST00000505117 EIF4G3O43432 1585 aaKnown RBP13.74□□□□□ -0.21
CASP6-204ENST00000505117 TOPBP1Q92547 1522 aa13.73□□□□□ -0.21
CASP6-204ENST00000505117 ARAP1Q96P48 1450 aa13.71□□□□□ -0.21
CASP6-204ENST00000505117 TARBP1Q13395 1621 aaKnown RBP13.71□□□□□ -0.22
CASP6-204ENST00000505117 ATMINO43313 823 aaPredicted RBP13.7□□□□□ -0.22
CASP6-204ENST00000505117 CCDC61Q9Y6R9 512 aa13.69□□□□□ -0.22
CASP6-204ENST00000505117 CHD1O14646 1710 aa13.69□□□□□ -0.22
CASP6-204ENST00000505117 DNMBPQ6XZF7 1577 aa13.68□□□□□ -0.22
CASP6-204ENST00000505117 TSPYL2Q9H2G4 693 aaPredicted RBP13.68□□□□□ -0.22
CASP6-204ENST00000505117 METRNQ9UJH8 293 aa13.67□□□□□ -0.22
CASP6-204ENST00000505117 WDR97A6NE52 1622 aa13.66□□□□□ -0.22
CASP6-204ENST00000505117 POTEJP0CG39 1038 aa13.63□□□□□ -0.23
CASP6-204ENST00000505117 CYB5RLQ6IPT4 315 aa13.63□□□□□ -0.23
CASP6-204ENST00000505117 SLC39A7Q92504 469 aa13.63□□□□□ -0.23
CASP6-204ENST00000505117 C7P10643 843 aa13.62□□□□□ -0.23
CASP6-204ENST00000505117 CLASP1Q7Z460 1538 aa13.62□□□□□ -0.23
CASP6-204ENST00000505117 KIF12Q96FN5 646 aa13.61□□□□□ -0.23
CASP6-204ENST00000505117 ATN1P54259 1190 aaPredicted RBP13.58□□□□□ -0.24
CASP6-204ENST00000505117 PLSCR2Q9NRY7 297 aa13.58□□□□□ -0.24
CASP6-204ENST00000505117 AQRO60306 1485 aaKnown RBP eCLIP13.56□□□□□ -0.24
CASP6-204ENST00000505117 POLA1P09884 1462 aaPredicted RBP13.56□□□□□ -0.24
CASP6-204ENST00000505117 RASEFQ8IZ41 740 aa13.54□□□□□ -0.24
CASP6-204ENST00000505117 TRPC6Q9Y210 931 aa13.54□□□□□ -0.24
CASP6-204ENST00000505117 POTEMA6NI47 508 aa13.53□□□□□ -0.24
CASP6-204ENST00000505117 BMP2KQ9NSY1 1161 aaPredicted RBP13.53□□□□□ -0.24
CASP6-204ENST00000505117 MIER1Q8N108 512 aa13.52□□□□□ -0.25
CASP6-204ENST00000505117 MAGI1Q96QZ7 1491 aaPredicted RBP13.51□□□□□ -0.25
CASP6-204ENST00000505117 MAP3K13O43283 966 aa13.51□□□□□ -0.25
CASP6-204ENST00000505117 SYNJ1O43426 1573 aa13.5□□□□□ -0.25
CASP6-204ENST00000505117 POTEFA5A3E0 1075 aa13.49□□□□□ -0.25
CASP6-204ENST00000505117 POTEGQ6S5H5 508 aa13.49□□□□□ -0.25
CASP6-204ENST00000505117 PLEKHG5O94827 1062 aa13.48□□□□□ -0.25
CASP6-204ENST00000505117 CUX1P39880 1505 aa13.48□□□□□ -0.25
CASP6-204ENST00000505117 MAMSTRQ6ZN01 415 aa13.47□□□□□ -0.25
CASP6-204ENST00000505117 TIE1P35590 1138 aa13.46□□□□□ -0.25
CASP6-204ENST00000505117 SYNJ2O15056 1496 aa13.44□□□□□ -0.26
CASP6-204ENST00000505117 SNAPC4Q5SXM2 1469 aa13.43□□□□□ -0.26
CASP6-204ENST00000505117 SOGA1O94964 1423 aa13.43□□□□□ -0.26
CASP6-204ENST00000505117 GRIN2BQ13224 1484 aa13.42□□□□□ -0.26
CASP6-204ENST00000505117 LCE2DQ5TA82 110 aaPredicted RBP13.42□□□□□ -0.26
CASP6-204ENST00000505117 FGD5Q6ZNL6 1462 aa13.42□□□□□ -0.26
CASP6-204ENST00000505117 RAD54L2Q9Y4B4 1467 aa13.42□□□□□ -0.26
CASP6-204ENST00000505117 TTLL13PA6NNM8 815 aa13.39□□□□□ -0.27
CASP6-204ENST00000505117 TDRD9Q8NDG6 1382 aaKnown RBP13.39□□□□□ -0.27
CASP6-204ENST00000505117 GAPVD1Q14C86 1478 aa13.39□□□□□ -0.27
CASP6-204ENST00000505117 SCUBE2Q9NQ36 999 aa13.38□□□□□ -0.27
CASP6-204ENST00000505117 BIVM-ERCC5R4GMW8 1640 aa13.38□□□□□ -0.27
CASP6-204ENST00000505117 PLCD3Q8N3E9 789 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms