RNA–Protein interactions for RNA: ENST00000505117.5

CASP6-204, Transcript of caspase 6, humanhuman

TSL 2

Gene CASP6, Length 774 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP6-204ENST00000505117 AEBP2Q6ZN18 517 aaPredicted RBP28.31■■■□□ 2.12
CASP6-204ENST00000505117 CHIC1Q5VXU3 224 aa26.6■■□□□ 1.85
CASP6-204ENST00000505117 SENP3Q9H4L4 574 aaPredicted RBP24.11■■□□□ 1.45
CASP6-204ENST00000505117 PHF23Q9BUL5 403 aaPredicted RBP23.78■■□□□ 1.4
CASP6-204ENST00000505117 FOXD1Q16676 465 aa22.55■■□□□ 1.2
CASP6-204ENST00000505117 MSH5O43196 834 aa21.14■□□□□ 0.97
CASP6-204ENST00000505117 POTEDQ86YR6 584 aa21.11■□□□□ 0.97
CASP6-204ENST00000505117 PLPPR3Q6T4P5 718 aa21.1■□□□□ 0.97
CASP6-204ENST00000505117 PIAS4Q8N2W9 510 aaPredicted RBP20.97■□□□□ 0.95
CASP6-204ENST00000505117 PPP6R1Q9UPN7 881 aa20.91■□□□□ 0.94
CASP6-204ENST00000505117 ADRA2BP18089 450 aa20.8■□□□□ 0.92
CASP6-204ENST00000505117 MAPK8IP2Q13387 824 aaPredicted RBP19.18■□□□□ 0.66
CASP6-204ENST00000505117 DMRT2Q9Y5R5 561 aa19.11■□□□□ 0.65
CASP6-204ENST00000505117 SCAF1Q9H7N4 1312 aaKnown RBP18.95■□□□□ 0.62
CASP6-204ENST00000505117 NISCHQ9Y2I1 1504 aa18.62■□□□□ 0.57
CASP6-204ENST00000505117 PPP4R3CPQ6ZMV5 832 aa18.47■□□□□ 0.55
CASP6-204ENST00000505117 HOXD11P31277 338 aaPredicted RBP18.32■□□□□ 0.52
CASP6-204ENST00000505117 CACNB1Q02641 598 aaPredicted RBP18.27■□□□□ 0.52
CASP6-204ENST00000505117 DCAF8L1A6NGE4 600 aa18.25■□□□□ 0.51
CASP6-204ENST00000505117 CNKSR2Q8WXI2 1034 aa18.18■□□□□ 0.5
CASP6-204ENST00000505117 RNF216Q9NWF9 866 aaPredicted RBP18.09■□□□□ 0.49
CASP6-204ENST00000505117 RNF39Q9H2S5 420 aa18.06■□□□□ 0.48
CASP6-204ENST00000505117 C1QBPQ07021 282 aaKnown RBP17.75■□□□□ 0.43
CASP6-204ENST00000505117 DNAJC5BQ9UF47 199 aa17.74■□□□□ 0.43
CASP6-204ENST00000505117 NCBP3Q53F19 620 aaKnown RBP17.63■□□□□ 0.41
CASP6-204ENST00000505117 NPM3O75607 178 aaKnown RBP17.46■□□□□ 0.39
CASP6-204ENST00000505117 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.38■□□□□ 0.37
CASP6-204ENST00000505117 U3KPZ7 1027 aaPredicted RBP17.06■□□□□ 0.32
CASP6-204ENST00000505117 ABCC9O60706 1549 aa16.92■□□□□ 0.3
CASP6-204ENST00000505117 KCNA4P22459 653 aa16.9■□□□□ 0.3
CASP6-204ENST00000505117 SPINK5Q9NQ38 1064 aaPredicted RBP16.88■□□□□ 0.29
CASP6-204ENST00000505117 CCDC180Q9P1Z9 1646 aa16.87■□□□□ 0.29
CASP6-204ENST00000505117 DSG3P32926 999 aa16.83■□□□□ 0.28
CASP6-204ENST00000505117 CAPN15O75808 1086 aa16.8■□□□□ 0.28
CASP6-204ENST00000505117 SLC4A2P04920 1241 aa16.76■□□□□ 0.27
CASP6-204ENST00000505117 TRHP20396 242 aaPredicted RBP16.47■□□□□ 0.23
CASP6-204ENST00000505117 POTEHQ6S545 545 aa16.47■□□□□ 0.23
CASP6-204ENST00000505117 APLP2Q06481 763 aa16.45■□□□□ 0.22
CASP6-204ENST00000505117 ZNF219Q9P2Y4 722 aaPredicted RBP16.44■□□□□ 0.22
CASP6-204ENST00000505117 ABCB7O75027 752 aa16.42■□□□□ 0.22
CASP6-204ENST00000505117 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.41■□□□□ 0.22
CASP6-204ENST00000505117 HNRNPUL2Q1KMD3 747 aaKnown RBP16.41■□□□□ 0.22
CASP6-204ENST00000505117 SAMD1Q6SPF0 538 aaPredicted RBP16.32■□□□□ 0.2
CASP6-204ENST00000505117 RB1CC1Q8TDY2 1594 aa16.13■□□□□ 0.17
CASP6-204ENST00000505117 MYCNP04198 464 aaPredicted RBP16.12■□□□□ 0.17
CASP6-204ENST00000505117 RBM42Q9BTD8 480 aaKnown RBP16■□□□□ 0.15
CASP6-204ENST00000505117 NACADO15069 1562 aa16■□□□□ 0.15
CASP6-204ENST00000505117 POLA2Q14181 598 aa15.99■□□□□ 0.15
CASP6-204ENST00000505117 SLC4A1APQ9BWU0 796 aaKnown RBP15.86■□□□□ 0.13
CASP6-204ENST00000505117 FOXD4L1Q9NU39 408 aa15.82■□□□□ 0.12
CASP6-204ENST00000505117 ATF5Q9Y2D1 282 aaPredicted RBP15.82■□□□□ 0.12
CASP6-204ENST00000505117 MYO15BQ96JP2 1530 aa15.81■□□□□ 0.12
CASP6-204ENST00000505117 UNC13AQ9UPW8 1703 aa15.8■□□□□ 0.12
CASP6-204ENST00000505117 CHRDL2Q6WN34 429 aa15.79■□□□□ 0.12
CASP6-204ENST00000505117 BICRAQ9NZM4 1560 aa15.7■□□□□ 0.1
CASP6-204ENST00000505117 ZBTB12Q9Y330 459 aaPredicted RBP15.63■□□□□ 0.09
CASP6-204ENST00000505117 SHROOM4Q9ULL8 1493 aa15.63■□□□□ 0.09
CASP6-204ENST00000505117 AKT1S1Q96B36 256 aa15.61■□□□□ 0.09
CASP6-204ENST00000505117 PABPN1Q86U42 306 aaKnown RBP eCLIP15.59■□□□□ 0.09
CASP6-204ENST00000505117 ZBTB22O15209 634 aa15.57■□□□□ 0.08
CASP6-204ENST00000505117 ZCCHC6Q5VYS8 1495 aaKnown RBP15.53■□□□□ 0.08
CASP6-204ENST00000505117 OSCARQ8IYS5 282 aa15.52■□□□□ 0.08
CASP6-204ENST00000505117 REM2Q8IYK8 340 aaPredicted RBP15.48■□□□□ 0.07
CASP6-204ENST00000505117 DCAF8L2P0C7V8 631 aa15.46■□□□□ 0.07
CASP6-204ENST00000505117 DCAF1Q9Y4B6 1507 aa15.43■□□□□ 0.06
CASP6-204ENST00000505117 CC2D2AQ9P2K1 1620 aa15.39■□□□□ 0.05
CASP6-204ENST00000505117 PIP4P2Q8N4L2 257 aa15.38■□□□□ 0.05
CASP6-204ENST00000505117 CECR2Q9BXF3 1484 aa15.36■□□□□ 0.05
CASP6-204ENST00000505117 ATXN8OSP0DMR3 200 aa15.36■□□□□ 0.05
CASP6-204ENST00000505117 PITPNM1O00562 1244 aa15.33■□□□□ 0.04
CASP6-204ENST00000505117 SP7Q8TDD2 431 aaPredicted RBP15.33■□□□□ 0.04
CASP6-204ENST00000505117 EIF4G1Q04637 1599 aaKnown RBP15.31■□□□□ 0.04
CASP6-204ENST00000505117 DNAJC5Q9H3Z4 198 aa15.28■□□□□ 0.04
CASP6-204ENST00000505117 FXR2P51116 673 aaKnown RBP eCLIP15.25■□□□□ 0.03
CASP6-204ENST00000505117 SPDYE2BA6NHP3 402 aa15.15■□□□□ 0.02
CASP6-204ENST00000505117 SPDYE6P0CI01 402 aa15.15■□□□□ 0.02
CASP6-204ENST00000505117 SPDYE2Q495Y8 402 aa15.15■□□□□ 0.02
CASP6-204ENST00000505117 FBLN2P98095 1184 aa15.13■□□□□ 0.01
CASP6-204ENST00000505117 SCRIBQ14160 1630 aa15.13■□□□□ 0.01
CASP6-204ENST00000505117 HAX1O00165 279 aa15.1■□□□□ 0.01
CASP6-204ENST00000505117 MKRN4PQ13434 485 aaPredicted RBP15.09■□□□□ 0.01
CASP6-204ENST00000505117 EVX2Q03828 476 aa14.99□□□□□ -0.01
CASP6-204ENST00000505117 SSUH2Q9Y2M2 353 aa14.97□□□□□ -0.01
CASP6-204ENST00000505117 CUX2O14529 1486 aa14.95□□□□□ -0.02
CASP6-204ENST00000505117 SPDYE1Q8NFV5 336 aaPredicted RBP14.93□□□□□ -0.02
CASP6-204ENST00000505117 ZNF692Q9BU19 519 aaPredicted RBP14.9□□□□□ -0.02
CASP6-204ENST00000505117 PRKAR2AP13861 404 aaKnown RBP14.89□□□□□ -0.03
CASP6-204ENST00000505117 CLEC11AQ9Y240 323 aa14.89□□□□□ -0.03
CASP6-204ENST00000505117 NCAPD3P42695 1498 aa14.77□□□□□ -0.04
CASP6-204ENST00000505117 C19orf67A6NJJ6 358 aa14.77□□□□□ -0.05
CASP6-204ENST00000505117 CHADLQ6NUI6 762 aa14.69□□□□□ -0.06
CASP6-204ENST00000505117 HMGXB3Q12766 1538 aa14.64□□□□□ -0.07
CASP6-204ENST00000505117 ERCC6Q03468 1493 aa14.63□□□□□ -0.07
CASP6-204ENST00000505117 PRR29P0C7W0 189 aa14.62□□□□□ -0.07
CASP6-204ENST00000505117 GABBR2O75899 941 aa14.6□□□□□ -0.07
CASP6-204ENST00000505117 CSRNP3Q8WYN3 585 aa14.6□□□□□ -0.07
CASP6-204ENST00000505117 ATAD2BQ9ULI0 1458 aa14.59□□□□□ -0.07
CASP6-204ENST00000505117 SMARCA2P51531 1590 aa14.57□□□□□ -0.08
CASP6-204ENST00000505117 THOC2Q8NI27 1593 aaKnown RBP14.54□□□□□ -0.08
CASP6-204ENST00000505117 PEG3Q9GZU2 1588 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 393 ms