RNA–Protein interactions for RNA: ENST00000504350.1

COPG1-202, Transcript of coatomer protein complex subunit gamma 1, humanhuman

TSL 3

Gene COPG1, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPG1-202ENST00000504350 SOGA1O94964 1423 aa8.8□□□□□ -1
COPG1-202ENST00000504350 CLIP1P30622 1438 aa8.8□□□□□ -1
COPG1-202ENST00000504350 HNRNPUL2Q1KMD3 747 aaKnown RBP8.79□□□□□ -1
COPG1-202ENST00000504350 ANO8Q9HCE9 1232 aaPredicted RBP8.79□□□□□ -1
COPG1-202ENST00000504350 RRBP1Q9P2E9 1410 aaKnown RBP8.79□□□□□ -1
COPG1-202ENST00000504350 MAPKBP1O60336 1514 aa8.78□□□□□ -1
COPG1-202ENST00000504350 SYNJ1O43426 1573 aa8.78□□□□□ -1
COPG1-202ENST00000504350 NCAPD3P42695 1498 aa8.77□□□□□ -1
COPG1-202ENST00000504350 ATAD2BQ9ULI0 1458 aa8.77□□□□□ -1
COPG1-202ENST00000504350 CCER2I3L3R5 266 aa8.77□□□□□ -1.01
COPG1-202ENST00000504350 CDK11AQ9UQ88 783 aaPredicted RBP8.76□□□□□ -1.01
COPG1-202ENST00000504350 PEG3Q9GZU2 1588 aa8.73□□□□□ -1.01
COPG1-202ENST00000504350 SMARCA4P51532 1647 aa8.73□□□□□ -1.01
COPG1-202ENST00000504350 ADRA2BP18089 450 aa8.73□□□□□ -1.01
COPG1-202ENST00000504350 RUSC2Q8N2Y8 1516 aa8.73□□□□□ -1.01
COPG1-202ENST00000504350 ERICH3Q5RHP9 1530 aa8.72□□□□□ -1.01
COPG1-202ENST00000504350 PPP6R1Q9UPN7 881 aa8.72□□□□□ -1.01
COPG1-202ENST00000504350 NOP58Q9Y2X3 529 aaKnown RBP8.72□□□□□ -1.01
COPG1-202ENST00000504350 SALL2Q9Y467 1007 aaPredicted RBP8.72□□□□□ -1.01
COPG1-202ENST00000504350 WDR97A6NE52 1622 aa8.71□□□□□ -1.02
COPG1-202ENST00000504350 RIMBP3CA6NJZ7 1639 aa8.71□□□□□ -1.02
COPG1-202ENST00000504350 RIMBP3BA6NNM3 1639 aa8.71□□□□□ -1.02
COPG1-202ENST00000504350 RIMBP3Q9UFD9 1639 aa8.71□□□□□ -1.02
COPG1-202ENST00000504350 EIF5BO60841 1220 aaKnown RBP8.7□□□□□ -1.02
COPG1-202ENST00000504350 ARAP1Q96P48 1450 aa8.7□□□□□ -1.02
COPG1-202ENST00000504350 HMGXB3Q12766 1538 aa8.7□□□□□ -1.02
COPG1-202ENST00000504350 ITGAEP38570 1179 aa8.69□□□□□ -1.02
COPG1-202ENST00000504350 KCNH8Q96L42 1107 aa8.69□□□□□ -1.02
COPG1-202ENST00000504350 UBTFP17480 764 aaKnown RBP8.67□□□□□ -1.02
COPG1-202ENST00000504350 LAMC3Q9Y6N6 1575 aa8.67□□□□□ -1.02
COPG1-202ENST00000504350 RTL5Q5HYW3 569 aaPredicted RBP8.66□□□□□ -1.02
COPG1-202ENST00000504350 PPP1R15AO75807 674 aaPredicted RBP8.65□□□□□ -1.02
COPG1-202ENST00000504350 CFAP43Q8NDM7 1665 aa8.65□□□□□ -1.03
COPG1-202ENST00000504350 C11orf95C9JLR9 678 aaPredicted RBP8.64□□□□□ -1.03
COPG1-202ENST00000504350 PPP4R2Q9NY27 417 aa8.64□□□□□ -1.03
COPG1-202ENST00000504350 WASHC2AQ641Q2 1341 aa8.63□□□□□ -1.03
COPG1-202ENST00000504350 RAPGEF2Q9Y4G8 1499 aa8.63□□□□□ -1.03
COPG1-202ENST00000504350 POLR1AO95602 1720 aaPredicted RBP8.63□□□□□ -1.03
COPG1-202ENST00000504350 CCNB3Q8WWL7 1395 aa8.62□□□□□ -1.03
COPG1-202ENST00000504350 BIVM-ERCC5R4GMW8 1640 aa8.62□□□□□ -1.03
COPG1-202ENST00000504350 WDR62O43379 1518 aa8.62□□□□□ -1.03
COPG1-202ENST00000504350 MAP3K1Q13233 1512 aa8.62□□□□□ -1.03
COPG1-202ENST00000504350 ANP32CO43423 234 aa8.61□□□□□ -1.03
COPG1-202ENST00000504350 CCDC136Q96JN2 1154 aa8.6□□□□□ -1.03
COPG1-202ENST00000504350 MRC2Q9UBG0 1479 aa8.59□□□□□ -1.03
COPG1-202ENST00000504350 HOMEZQ8IX15 550 aa8.59□□□□□ -1.03
COPG1-202ENST00000504350 IL27Q8NEV9 243 aa8.59□□□□□ -1.03
COPG1-202ENST00000504350 TIMELESSQ9UNS1 1208 aa8.59□□□□□ -1.03
COPG1-202ENST00000504350 TIAM1Q13009 1591 aa8.59□□□□□ -1.03
COPG1-202ENST00000504350 RAB3GAP2Q9H2M9 1393 aa8.59□□□□□ -1.03
COPG1-202ENST00000504350 TOP2BQ02880 1626 aa8.58□□□□□ -1.04
COPG1-202ENST00000504350 ABCA5Q8WWZ7 1642 aa8.58□□□□□ -1.04
COPG1-202ENST00000504350 NCOA2Q15596 1464 aa8.58□□□□□ -1.04
COPG1-202ENST00000504350 WASHC2CQ9Y4E1 1318 aa8.58□□□□□ -1.04
COPG1-202ENST00000504350 ANP32AP39687 249 aaKnown RBP8.58□□□□□ -1.04
COPG1-202ENST00000504350 NBR1Q14596 966 aa8.58□□□□□ -1.04
COPG1-202ENST00000504350 PAK3O75914 559 aaPredicted RBP8.57□□□□□ -1.04
COPG1-202ENST00000504350 TRIM52Q96A61 297 aa8.57□□□□□ -1.04
COPG1-202ENST00000504350 SETD5Q9C0A6 1442 aa8.56□□□□□ -1.04
COPG1-202ENST00000504350 ARHGEF11O15085 1522 aa8.56□□□□□ -1.04
COPG1-202ENST00000504350 DDX10Q13206 875 aaKnown RBP8.56□□□□□ -1.04
COPG1-202ENST00000504350 PKNOX2Q96KN3 472 aa8.56□□□□□ -1.04
COPG1-202ENST00000504350 IPO9Q96P70 1041 aaKnown RBP8.56□□□□□ -1.04
COPG1-202ENST00000504350 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.56□□□□□ -1.04
COPG1-202ENST00000504350 USP35Q9P2H5 1018 aa8.56□□□□□ -1.04
COPG1-202ENST00000504350 FHAD1B1AJZ9 1412 aa8.55□□□□□ -1.04
COPG1-202ENST00000504350 PRXQ9BXM0 1461 aa8.54□□□□□ -1.04
COPG1-202ENST00000504350 PDS5BQ9NTI5 1447 aa8.54□□□□□ -1.04
COPG1-202ENST00000504350 OSCARQ8IYS5 282 aa8.53□□□□□ -1.04
COPG1-202ENST00000504350 CHD1O14646 1710 aa8.52□□□□□ -1.05
COPG1-202ENST00000504350 KDM5BQ9UGL1 1544 aa8.52□□□□□ -1.05
COPG1-202ENST00000504350 URB2Q14146 1524 aaKnown RBP8.51□□□□□ -1.05
COPG1-202ENST00000504350 CNTLNQ9NXG0 1405 aa8.51□□□□□ -1.05
COPG1-202ENST00000504350 ZNF608Q9ULD9 1512 aaPredicted RBP8.5□□□□□ -1.05
COPG1-202ENST00000504350 HNRNPUQ00839 825 aaKnown RBP eCLIP8.5□□□□□ -1.05
COPG1-202ENST00000504350 RSPH6AQ9H0K4 717 aa8.5□□□□□ -1.05
COPG1-202ENST00000504350 ZBED9Q6R2W3 1325 aa8.5□□□□□ -1.05
COPG1-202ENST00000504350 CADPSQ9ULU8 1353 aa8.49□□□□□ -1.05
COPG1-202ENST00000504350 IRX6P78412 446 aaPredicted RBP8.49□□□□□ -1.05
COPG1-202ENST00000504350 CYB5RLQ6IPT4 315 aa8.49□□□□□ -1.05
COPG1-202ENST00000504350 ZBTB47Q9UFB7 747 aaPredicted RBP8.49□□□□□ -1.05
COPG1-202ENST00000504350 SMG6Q86US8 1419 aaKnown RBP8.48□□□□□ -1.05
COPG1-202ENST00000504350 HECW1Q76N89 1606 aa8.48□□□□□ -1.05
COPG1-202ENST00000504350 PPM1GO15355 546 aaPredicted RBP8.48□□□□□ -1.05
COPG1-202ENST00000504350 TRHP20396 242 aaPredicted RBP8.48□□□□□ -1.05
COPG1-202ENST00000504350 ARHGAP35Q9NRY4 1499 aa8.48□□□□□ -1.05
COPG1-202ENST00000504350 FANCD2Q9BXW9 1451 aa8.46□□□□□ -1.05
COPG1-202ENST00000504350 VIRMAQ69YN4 1812 aaKnown RBP8.46□□□□□ -1.06
COPG1-202ENST00000504350 GLIPR1L2Q4G1C9 344 aa8.45□□□□□ -1.06
COPG1-202ENST00000504350 B4GALNT3Q6L9W6 998 aa8.45□□□□□ -1.06
COPG1-202ENST00000504350 GCC2Q8IWJ2 1684 aa8.45□□□□□ -1.06
COPG1-202ENST00000504350 RNF123Q5XPI4 1314 aa8.45□□□□□ -1.06
COPG1-202ENST00000504350 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.45□□□□□ -1.06
COPG1-202ENST00000504350 LRRC9Q6ZRR7 1453 aa8.45□□□□□ -1.06
COPG1-202ENST00000504350 PTPN23Q9H3S7 1636 aa8.44□□□□□ -1.06
COPG1-202ENST00000504350 KANK4Q5T7N3 995 aaPredicted RBP8.44□□□□□ -1.06
COPG1-202ENST00000504350 PCF11O94913 1555 aaKnown RBP8.44□□□□□ -1.06
COPG1-202ENST00000504350 NEFMP07197 916 aa8.43□□□□□ -1.06
COPG1-202ENST00000504350 FAM43AQ8N2R8 423 aa8.43□□□□□ -1.06
COPG1-202ENST00000504350 TONSLQ96HA7 1378 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms