RNA–Protein interactions for RNA: ENST00000504208.5

KLHL3-204, Transcript of kelch like family member 3, humanhuman

TSL 2

Gene KLHL3, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL3-204ENST00000504208 CARMIL1Q5VZK9 1371 aa14.87□□□□□ -0.03
KLHL3-204ENST00000504208 SYNJ2O15056 1496 aa14.87□□□□□ -0.03
KLHL3-204ENST00000504208 GRIN2AQ12879 1464 aa14.84□□□□□ -0.03
KLHL3-204ENST00000504208 CLIP1P30622 1438 aa14.83□□□□□ -0.03
KLHL3-204ENST00000504208 CEP170Q5SW79 1584 aa14.8□□□□□ -0.04
KLHL3-204ENST00000504208 VPS8Q8N3P4 1428 aa14.77□□□□□ -0.05
KLHL3-204ENST00000504208 ZEB1P37275 1124 aaPredicted RBP14.75□□□□□ -0.05
KLHL3-204ENST00000504208 IQGAP2Q13576 1575 aa14.74□□□□□ -0.05
KLHL3-204ENST00000504208 CHMP7Q8WUX9 453 aaPredicted RBP14.73□□□□□ -0.05
KLHL3-204ENST00000504208 NUP160Q12769 1436 aa14.73□□□□□ -0.05
KLHL3-204ENST00000504208 FBLN2P98095 1184 aa14.73□□□□□ -0.05
KLHL3-204ENST00000504208 CLASP1Q7Z460 1538 aa14.7□□□□□ -0.06
KLHL3-204ENST00000504208 KIAA0586Q9BVV6 1533 aa14.67□□□□□ -0.06
KLHL3-204ENST00000504208 SHROOM2Q13796 1616 aa14.67□□□□□ -0.06
KLHL3-204ENST00000504208 APLP2Q06481 763 aa14.65□□□□□ -0.06
KLHL3-204ENST00000504208 SAMD9Q5K651 1589 aa14.65□□□□□ -0.06
KLHL3-204ENST00000504208 EFCAB5A4FU69 1503 aa14.63□□□□□ -0.07
KLHL3-204ENST00000504208 UGGT2Q9NYU1 1516 aa14.63□□□□□ -0.07
KLHL3-204ENST00000504208 ARAP1Q96P48 1450 aa14.61□□□□□ -0.07
KLHL3-204ENST00000504208 KIAA0556O60303 1618 aa14.61□□□□□ -0.07
KLHL3-204ENST00000504208 PPARGC1BQ86YN6 1023 aaKnown RBP14.59□□□□□ -0.07
KLHL3-204ENST00000504208 OSCARQ8IYS5 282 aa14.58□□□□□ -0.08
KLHL3-204ENST00000504208 ARHGAP35Q9NRY4 1499 aa14.58□□□□□ -0.08
KLHL3-204ENST00000504208 RANGAP1P46060 587 aaPredicted RBP14.56□□□□□ -0.08
KLHL3-204ENST00000504208 DISP1Q96F81 1524 aa14.54□□□□□ -0.08
KLHL3-204ENST00000504208 MAP3K1Q13233 1512 aa14.54□□□□□ -0.08
KLHL3-204ENST00000504208 ERCC6L2Q5T890 1561 aa14.53□□□□□ -0.08
KLHL3-204ENST00000504208 FHOD3Q2V2M9 1422 aa14.5□□□□□ -0.09
KLHL3-204ENST00000504208 PRG4Q92954 1404 aaPredicted RBP14.5□□□□□ -0.09
KLHL3-204ENST00000504208 CARMIL2Q6F5E8 1435 aa14.49□□□□□ -0.09
KLHL3-204ENST00000504208 PCF11O94913 1555 aaKnown RBP14.48□□□□□ -0.09
KLHL3-204ENST00000504208 JPH4Q96JJ6 628 aa14.47□□□□□ -0.09
KLHL3-204ENST00000504208 RIMBP3CA6NJZ7 1639 aa14.44□□□□□ -0.1
KLHL3-204ENST00000504208 RIMBP3BA6NNM3 1639 aa14.44□□□□□ -0.1
KLHL3-204ENST00000504208 RIMBP3Q9UFD9 1639 aa14.44□□□□□ -0.1
KLHL3-204ENST00000504208 ARHGEF11O15085 1522 aa14.44□□□□□ -0.1
KLHL3-204ENST00000504208 LRRIQ1Q96JM4 1722 aa14.44□□□□□ -0.1
KLHL3-204ENST00000504208 P3H3Q8IVL6 736 aa14.43□□□□□ -0.1
KLHL3-204ENST00000504208 RAPGEF6Q8TEU7 1601 aa14.43□□□□□ -0.1
KLHL3-204ENST00000504208 FMN1Q68DA7 1419 aa14.41□□□□□ -0.1
KLHL3-204ENST00000504208 HECW1Q76N89 1606 aa14.41□□□□□ -0.1
KLHL3-204ENST00000504208 CFAP43Q8NDM7 1665 aa14.4□□□□□ -0.1
KLHL3-204ENST00000504208 CCER1Q8TC90 406 aaPredicted RBP14.39□□□□□ -0.11
KLHL3-204ENST00000504208 RRBP1Q9P2E9 1410 aaKnown RBP14.39□□□□□ -0.11
KLHL3-204ENST00000504208 TTBK1Q5TCY1 1321 aaPredicted RBP14.39□□□□□ -0.11
KLHL3-204ENST00000504208 FYCO1Q9BQS8 1478 aa14.39□□□□□ -0.11
KLHL3-204ENST00000504208 ABCA8O94911 1581 aa14.38□□□□□ -0.11
KLHL3-204ENST00000504208 CASKIN1Q8WXD9 1431 aa14.38□□□□□ -0.11
KLHL3-204ENST00000504208 KANK4Q5T7N3 995 aaPredicted RBP14.38□□□□□ -0.11
KLHL3-204ENST00000504208 TIAM1Q13009 1591 aa14.37□□□□□ -0.11
KLHL3-204ENST00000504208 PLB1Q6P1J6 1458 aa14.35□□□□□ -0.11
KLHL3-204ENST00000504208 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.34□□□□□ -0.11
KLHL3-204ENST00000504208 PTPRGP23470 1445 aa14.34□□□□□ -0.11
KLHL3-204ENST00000504208 ADCY10Q96PN6 1610 aa14.34□□□□□ -0.11
KLHL3-204ENST00000504208 ABCC2Q92887 1545 aa14.33□□□□□ -0.11
KLHL3-204ENST00000504208 LRRC9Q6ZRR7 1453 aa14.33□□□□□ -0.12
KLHL3-204ENST00000504208 NUP153P49790 1475 aaKnown RBP14.31□□□□□ -0.12
KLHL3-204ENST00000504208 CCNB3Q8WWL7 1395 aa14.31□□□□□ -0.12
KLHL3-204ENST00000504208 ZCCHC11Q5TAX3 1644 aaKnown RBP14.3□□□□□ -0.12
KLHL3-204ENST00000504208 AEBP2Q6ZN18 517 aaPredicted RBP14.3□□□□□ -0.12
KLHL3-204ENST00000504208 CCDC18Q5T9S5 1454 aa14.29□□□□□ -0.12
KLHL3-204ENST00000504208 CDK13Q14004 1512 aaKnown RBP14.29□□□□□ -0.12
KLHL3-204ENST00000504208 CLSPNQ9HAW4 1339 aa14.29□□□□□ -0.12
KLHL3-204ENST00000504208 UACAQ9BZF9 1416 aa14.28□□□□□ -0.12
KLHL3-204ENST00000504208 UHRF1BP1LA0JNW5 1464 aa14.28□□□□□ -0.12
KLHL3-204ENST00000504208 EPRSP07814 1512 aaKnown RBP14.27□□□□□ -0.12
KLHL3-204ENST00000504208 HNRNPUL2Q1KMD3 747 aaKnown RBP14.27□□□□□ -0.12
KLHL3-204ENST00000504208 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.27□□□□□ -0.13
KLHL3-204ENST00000504208 ATP1B4Q9UN42 357 aaPredicted RBP14.23□□□□□ -0.13
KLHL3-204ENST00000504208 EHBP1L1Q8N3D4 1523 aa14.21□□□□□ -0.13
KLHL3-204ENST00000504208 KDM5BQ9UGL1 1544 aa14.21□□□□□ -0.13
KLHL3-204ENST00000504208 CYB5RLQ6IPT4 315 aa14.21□□□□□ -0.14
KLHL3-204ENST00000504208 MAGI3Q5TCQ9 1506 aa14.21□□□□□ -0.14
KLHL3-204ENST00000504208 ATP10BO94823 1461 aa14.19□□□□□ -0.14
KLHL3-204ENST00000504208 ARID3CA6NKF2 412 aa14.19□□□□□ -0.14
KLHL3-204ENST00000504208 SUPT6HQ7KZ85 1726 aaKnown RBP14.19□□□□□ -0.14
KLHL3-204ENST00000504208 PHLDB1Q86UU1 1377 aa14.18□□□□□ -0.14
KLHL3-204ENST00000504208 KIF14Q15058 1648 aa14.16□□□□□ -0.14
KLHL3-204ENST00000504208 MTUS2Q5JR59 1369 aa14.16□□□□□ -0.14
KLHL3-204ENST00000504208 MAPKBP1O60336 1514 aa14.13□□□□□ -0.15
KLHL3-204ENST00000504208 TROQ12816 1431 aaPredicted RBP14.12□□□□□ -0.15
KLHL3-204ENST00000504208 DHX57Q6P158 1386 aaKnown RBP14.11□□□□□ -0.15
KLHL3-204ENST00000504208 ITSN2Q9NZM3 1697 aa14.11□□□□□ -0.15
KLHL3-204ENST00000504208 WDR7Q9Y4E6 1490 aa14.11□□□□□ -0.15
KLHL3-204ENST00000504208 FGD6Q6ZV73 1430 aa14.1□□□□□ -0.15
KLHL3-204ENST00000504208 CDC42BPAQ5VT25 1732 aa14.1□□□□□ -0.15
KLHL3-204ENST00000504208 MYO5CQ9NQX4 1742 aa14.1□□□□□ -0.15
KLHL3-204ENST00000504208 TTC37Q6PGP7 1564 aa14.1□□□□□ -0.15
KLHL3-204ENST00000504208 SETD5Q9C0A6 1442 aa14.09□□□□□ -0.15
KLHL3-204ENST00000504208 MYOM3Q5VTT5 1437 aa14.08□□□□□ -0.16
KLHL3-204ENST00000504208 ASXL2Q76L83 1435 aa14.08□□□□□ -0.16
KLHL3-204ENST00000504208 NCOA2Q15596 1464 aa14.07□□□□□ -0.16
KLHL3-204ENST00000504208 CDK11AQ9UQ88 783 aaPredicted RBP14.07□□□□□ -0.16
KLHL3-204ENST00000504208 PREX2Q70Z35 1606 aa14.06□□□□□ -0.16
KLHL3-204ENST00000504208 KIF13AQ9H1H9 1805 aa14.06□□□□□ -0.16
KLHL3-204ENST00000504208 ABCA9Q8IUA7 1624 aa14.06□□□□□ -0.16
KLHL3-204ENST00000504208 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.05□□□□□ -0.16
KLHL3-204ENST00000504208 NPM1P06748 294 aaKnown RBP eCLIP14.05□□□□□ -0.16
KLHL3-204ENST00000504208 FAM50AQ14320 339 aaKnown RBP14.05□□□□□ -0.16
KLHL3-204ENST00000504208 MIA2Q96PC5 1412 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms