RNA–Protein interactions for RNA: ENST00000504157.5

POLR2J3-209, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 2,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-209ENST00000504157 MAPKBP1O60336 1514 aa25.2■■□□□ 1.62
POLR2J3-209ENST00000504157 CFTRP13569 1480 aa25.19■■□□□ 1.62
POLR2J3-209ENST00000504157 NESP48681 1621 aa25.19■■□□□ 1.62
POLR2J3-209ENST00000504157 ITGAEP38570 1179 aa25.16■■□□□ 1.62
POLR2J3-209ENST00000504157 DEKP35659 375 aaKnown RBP25.12■■□□□ 1.61
POLR2J3-209ENST00000504157 LAMC3Q9Y6N6 1575 aa25.08■■□□□ 1.61
POLR2J3-209ENST00000504157 RAB3GAP2Q9H2M9 1393 aa25.08■■□□□ 1.61
POLR2J3-209ENST00000504157 CCER2I3L3R5 266 aa25.07■■□□□ 1.6
POLR2J3-209ENST00000504157 RANGAP1P46060 587 aaPredicted RBP25.07■■□□□ 1.6
POLR2J3-209ENST00000504157 MAP3K1Q13233 1512 aa25.06■■□□□ 1.6
POLR2J3-209ENST00000504157 TIMELESSQ9UNS1 1208 aa25.04■■□□□ 1.6
POLR2J3-209ENST00000504157 PPP1R15AO75807 674 aaPredicted RBP25.04■■□□□ 1.6
POLR2J3-209ENST00000504157 CDK11AQ9UQ88 783 aaPredicted RBP25.01■■□□□ 1.59
POLR2J3-209ENST00000504157 WDR97A6NE52 1622 aa25■■□□□ 1.59
POLR2J3-209ENST00000504157 ARHGAP35Q9NRY4 1499 aa25■■□□□ 1.59
POLR2J3-209ENST00000504157 ANO8Q9HCE9 1232 aaPredicted RBP24.99■■□□□ 1.59
POLR2J3-209ENST00000504157 SETD5Q9C0A6 1442 aa24.99■■□□□ 1.59
POLR2J3-209ENST00000504157 ERICH6BQ5W0A0 696 aa24.97■■□□□ 1.59
POLR2J3-209ENST00000504157 PRDM2Q13029 1718 aa24.96■■□□□ 1.59
POLR2J3-209ENST00000504157 DDX10Q13206 875 aaKnown RBP24.95■■□□□ 1.58
POLR2J3-209ENST00000504157 FANCD2Q9BXW9 1451 aa24.94■■□□□ 1.58
POLR2J3-209ENST00000504157 PDS5BQ9NTI5 1447 aa24.93■■□□□ 1.58
POLR2J3-209ENST00000504157 KIF27Q86VH2 1401 aa24.92■■□□□ 1.58
POLR2J3-209ENST00000504157 TIAM1Q13009 1591 aa24.91■■□□□ 1.58
POLR2J3-209ENST00000504157 TRIM52Q96A61 297 aa24.89■■□□□ 1.57
POLR2J3-209ENST00000504157 ANP32CO43423 234 aa24.85■■□□□ 1.57
POLR2J3-209ENST00000504157 KIF21AQ7Z4S6 1674 aa24.84■■□□□ 1.57
POLR2J3-209ENST00000504157 CUX1P39880 1505 aa24.82■■□□□ 1.56
POLR2J3-209ENST00000504157 LRRC9Q6ZRR7 1453 aa24.8■■□□□ 1.56
POLR2J3-209ENST00000504157 ERCC6Q03468 1493 aa24.8■■□□□ 1.56
POLR2J3-209ENST00000504157 SIN3AQ96ST3 1273 aa24.75■■□□□ 1.55
POLR2J3-209ENST00000504157 SALL2Q9Y467 1007 aaPredicted RBP24.75■■□□□ 1.55
POLR2J3-209ENST00000504157 PHLDB1Q86UU1 1377 aa24.72■■□□□ 1.55
POLR2J3-209ENST00000504157 NOP58Q9Y2X3 529 aaKnown RBP24.71■■□□□ 1.55
POLR2J3-209ENST00000504157 CFAP43Q8NDM7 1665 aa24.71■■□□□ 1.55
POLR2J3-209ENST00000504157 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.71■■□□□ 1.55
POLR2J3-209ENST00000504157 PPP4R2Q9NY27 417 aa24.66■■□□□ 1.54
POLR2J3-209ENST00000504157 URB2Q14146 1524 aaKnown RBP24.65■■□□□ 1.54
POLR2J3-209ENST00000504157 FHAD1B1AJZ9 1412 aa24.64■■□□□ 1.54
POLR2J3-209ENST00000504157 MRC2Q9UBG0 1479 aa24.62■■□□□ 1.53
POLR2J3-209ENST00000504157 NBR1Q14596 966 aa24.62■■□□□ 1.53
POLR2J3-209ENST00000504157 TOPBP1Q92547 1522 aa24.61■■□□□ 1.53
POLR2J3-209ENST00000504157 IRX6P78412 446 aaPredicted RBP24.59■■□□□ 1.53
POLR2J3-209ENST00000504157 UBE2Q2Q8WVN8 375 aa24.59■■□□□ 1.53
POLR2J3-209ENST00000504157 DNMBPQ6XZF7 1577 aa24.59■■□□□ 1.53
POLR2J3-209ENST00000504157 PAK3O75914 559 aaPredicted RBP24.57■■□□□ 1.52
POLR2J3-209ENST00000504157 IGF1RP08069 1367 aa24.56■■□□□ 1.52
POLR2J3-209ENST00000504157 FAM50AQ14320 339 aaKnown RBP24.54■■□□□ 1.52
POLR2J3-209ENST00000504157 THOC2Q8NI27 1593 aaKnown RBP24.54■■□□□ 1.52
POLR2J3-209ENST00000504157 TONSLQ96HA7 1378 aa24.54■■□□□ 1.52
POLR2J3-209ENST00000504157 PCF11O94913 1555 aaKnown RBP24.52■■□□□ 1.52
POLR2J3-209ENST00000504157 HIRIP3Q9BW71 556 aaPredicted RBP24.52■■□□□ 1.52
POLR2J3-209ENST00000504157 FGD5Q6ZNL6 1462 aa24.5■■□□□ 1.51
POLR2J3-209ENST00000504157 HNRNPUQ00839 825 aaKnown RBP eCLIP24.5■■□□□ 1.51
POLR2J3-209ENST00000504157 WDR62O43379 1518 aa24.5■■□□□ 1.51
POLR2J3-209ENST00000504157 CCDC136Q96JN2 1154 aa24.49■■□□□ 1.51
POLR2J3-209ENST00000504157 RTL5Q5HYW3 569 aaPredicted RBP24.48■■□□□ 1.51
POLR2J3-209ENST00000504157 IL27Q8NEV9 243 aa24.48■■□□□ 1.51
POLR2J3-209ENST00000504157 UACAQ9BZF9 1416 aa24.48■■□□□ 1.51
POLR2J3-209ENST00000504157 FYCO1Q9BQS8 1478 aa24.47■■□□□ 1.51
POLR2J3-209ENST00000504157 POLA1P09884 1462 aaPredicted RBP24.46■■□□□ 1.51
POLR2J3-209ENST00000504157 AQRO60306 1485 aaKnown RBP eCLIP24.45■■□□□ 1.514e-8■■■■□ 22.5
POLR2J3-209ENST00000504157 KDM5BQ9UGL1 1544 aa24.45■■□□□ 1.5
POLR2J3-209ENST00000504157 CARMIL1Q5VZK9 1371 aa24.45■■□□□ 1.5
POLR2J3-209ENST00000504157 HFM1A2PYH4 1435 aa24.44■■□□□ 1.5
POLR2J3-209ENST00000504157 CCDC18Q5T9S5 1454 aa24.43■■□□□ 1.5
POLR2J3-209ENST00000504157 IPO9Q96P70 1041 aaKnown RBP24.41■■□□□ 1.5
POLR2J3-209ENST00000504157 RAD54L2Q9Y4B4 1467 aa24.41■■□□□ 1.5
POLR2J3-209ENST00000504157 NCOA2Q15596 1464 aa24.4■■□□□ 1.5
POLR2J3-209ENST00000504157 CASKIN1Q8WXD9 1431 aa24.39■■□□□ 1.5
POLR2J3-209ENST00000504157 B4GALNT3Q6L9W6 998 aa24.39■■□□□ 1.49
POLR2J3-209ENST00000504157 EFCAB5A4FU69 1503 aa24.39■■□□□ 1.49
POLR2J3-209ENST00000504157 FGD6Q6ZV73 1430 aa24.38■■□□□ 1.49
POLR2J3-209ENST00000504157 PTPN23Q9H3S7 1636 aa24.37■■□□□ 1.49
POLR2J3-209ENST00000504157 WASHC2AQ641Q2 1341 aa24.37■■□□□ 1.49
POLR2J3-209ENST00000504157 ANP32AP39687 249 aaKnown RBP24.34■■□□□ 1.49
POLR2J3-209ENST00000504157 ZBTB47Q9UFB7 747 aaPredicted RBP24.31■■□□□ 1.48
POLR2J3-209ENST00000504157 CNTLNQ9NXG0 1405 aa24.3■■□□□ 1.48
POLR2J3-209ENST00000504157 C11orf95C9JLR9 678 aaPredicted RBP24.3■■□□□ 1.48
POLR2J3-209ENST00000504157 RTN4Q9NQC3 1192 aaKnown RBP24.3■■□□□ 1.48
POLR2J3-209ENST00000504157 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.3■■□□□ 1.48
POLR2J3-209ENST00000504157 ZBED9Q6R2W3 1325 aa24.27■■□□□ 1.48
POLR2J3-209ENST00000504157 NAIPQ13075 1403 aa24.27■■□□□ 1.48
POLR2J3-209ENST00000504157 TARBP1Q13395 1621 aaKnown RBP24.26■■□□□ 1.47
POLR2J3-209ENST00000504157 PTPRKQ15262 1439 aa24.26■■□□□ 1.47
POLR2J3-209ENST00000504157 ABCA10Q8WWZ4 1543 aa24.25■■□□□ 1.47
POLR2J3-209ENST00000504157 IFT140Q96RY7 1462 aa24.25■■□□□ 1.47
POLR2J3-209ENST00000504157 FHOD3Q2V2M9 1422 aa24.24■■□□□ 1.47
POLR2J3-209ENST00000504157 TDRD9Q8NDG6 1382 aaKnown RBP24.23■■□□□ 1.47
POLR2J3-209ENST00000504157 USP35Q9P2H5 1018 aa24.22■■□□□ 1.47
POLR2J3-209ENST00000504157 WASHC2CQ9Y4E1 1318 aa24.22■■□□□ 1.47
POLR2J3-209ENST00000504157 FMN1Q68DA7 1419 aa24.22■■□□□ 1.47
POLR2J3-209ENST00000504157 HSPA5P11021 654 aaKnown RBP24.21■■□□□ 1.47
POLR2J3-209ENST00000504157 SNAPC4Q5SXM2 1469 aa24.18■■□□□ 1.46
POLR2J3-209ENST00000504157 ZNF608Q9ULD9 1512 aaPredicted RBP24.18■■□□□ 1.46
POLR2J3-209ENST00000504157 NCOA1Q15788 1441 aa24.17■■□□□ 1.46
POLR2J3-209ENST00000504157 HECW1Q76N89 1606 aa24.16■■□□□ 1.46
POLR2J3-209ENST00000504157 EIF4G2P78344 907 aaKnown RBP eCLIP24.16■■□□□ 1.46
POLR2J3-209ENST00000504157 PRKRIP1Q9H875 184 aaPredicted RBP24.16■■□□□ 1.46
POLR2J3-209ENST00000504157 MYOM3Q5VTT5 1437 aa24.14■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms