RNA–Protein interactions for RNA: ENST00000504110.1

C4orf3-202, Transcript of chromosome 4 open reading frame 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C4orf3, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf3-202ENST00000504110 KIAA0586Q9BVV6 1533 aa25.8■■□□□ 1.72
C4orf3-202ENST00000504110 CTTNBP2Q8WZ74 1663 aa25.8■■□□□ 1.72
C4orf3-202ENST00000504110 IQGAP2Q13576 1575 aa25.73■■□□□ 1.71
C4orf3-202ENST00000504110 EHMT2Q96KQ7 1210 aa25.73■■□□□ 1.71
C4orf3-202ENST00000504110 UBTFP17480 764 aaKnown RBP25.71■■□□□ 1.71
C4orf3-202ENST00000504110 SHROOM2Q13796 1616 aa25.69■■□□□ 1.7
C4orf3-202ENST00000504110 JPH4Q96JJ6 628 aa25.67■■□□□ 1.7
C4orf3-202ENST00000504110 UGGT2Q9NYU1 1516 aa25.61■■□□□ 1.69
C4orf3-202ENST00000504110 TNIKQ9UKE5 1360 aa25.6■■□□□ 1.69
C4orf3-202ENST00000504110 LOC105371045A0A1W2PR82 267 aa25.59■■□□□ 1.69
C4orf3-202ENST00000504110 PRG4Q92954 1404 aaPredicted RBP25.57■■□□□ 1.68
C4orf3-202ENST00000504110 ARHGEF11O15085 1522 aa25.54■■□□□ 1.68
C4orf3-202ENST00000504110 CARMIL2Q6F5E8 1435 aa25.52■■□□□ 1.68
C4orf3-202ENST00000504110 ERCC6L2Q5T890 1561 aa25.51■■□□□ 1.67
C4orf3-202ENST00000504110 RIMBP3CA6NJZ7 1639 aa25.5■■□□□ 1.67
C4orf3-202ENST00000504110 RIMBP3BA6NNM3 1639 aa25.5■■□□□ 1.67
C4orf3-202ENST00000504110 DISP1Q96F81 1524 aa25.5■■□□□ 1.67
C4orf3-202ENST00000504110 RIMBP3Q9UFD9 1639 aa25.5■■□□□ 1.67
C4orf3-202ENST00000504110 KIAA0556O60303 1618 aa25.48■■□□□ 1.67
C4orf3-202ENST00000504110 SAMD9Q5K651 1589 aa25.47■■□□□ 1.67
C4orf3-202ENST00000504110 EFCAB5A4FU69 1503 aa25.46■■□□□ 1.67
C4orf3-202ENST00000504110 RANGAP1P46060 587 aaPredicted RBP25.45■■□□□ 1.66
C4orf3-202ENST00000504110 ARHGAP35Q9NRY4 1499 aa25.38■■□□□ 1.65
C4orf3-202ENST00000504110 CLIP1P30622 1438 aa25.37■■□□□ 1.65
C4orf3-202ENST00000504110 CEP162Q5TB80 1403 aa25.37■■□□□ 1.65
C4orf3-202ENST00000504110 ARAP1Q96P48 1450 aa25.36■■□□□ 1.65
C4orf3-202ENST00000504110 P3H3Q8IVL6 736 aa25.35■■□□□ 1.65
C4orf3-202ENST00000504110 PTPRGP23470 1445 aa25.33■■□□□ 1.65
C4orf3-202ENST00000504110 FHOD3Q2V2M9 1422 aa25.31■■□□□ 1.64
C4orf3-202ENST00000504110 CYB5RLQ6IPT4 315 aa25.26■■□□□ 1.63
C4orf3-202ENST00000504110 TTBK1Q5TCY1 1321 aaPredicted RBP25.26■■□□□ 1.63
C4orf3-202ENST00000504110 FMN1Q68DA7 1419 aa25.2■■□□□ 1.63
C4orf3-202ENST00000504110 UACAQ9BZF9 1416 aa25.18■■□□□ 1.62
C4orf3-202ENST00000504110 ABCA8O94911 1581 aa25.18■■□□□ 1.62
C4orf3-202ENST00000504110 PLB1Q6P1J6 1458 aa25.16■■□□□ 1.62
C4orf3-202ENST00000504110 UHRF1BP1LA0JNW5 1464 aa25.15■■□□□ 1.62
C4orf3-202ENST00000504110 ABCC2Q92887 1545 aa25.14■■□□□ 1.62
C4orf3-202ENST00000504110 RAPGEF6Q8TEU7 1601 aa25.14■■□□□ 1.61
C4orf3-202ENST00000504110 ADCY10Q96PN6 1610 aa25.12■■□□□ 1.61
C4orf3-202ENST00000504110 VPS8Q8N3P4 1428 aa25.05■■□□□ 1.6
C4orf3-202ENST00000504110 PCF11O94913 1555 aaKnown RBP25.05■■□□□ 1.6
C4orf3-202ENST00000504110 CASKIN1Q8WXD9 1431 aa25.04■■□□□ 1.6
C4orf3-202ENST00000504110 HECW1Q76N89 1606 aa25.04■■□□□ 1.6
C4orf3-202ENST00000504110 NUP153P49790 1475 aaKnown RBP25.02■■□□□ 1.6
C4orf3-202ENST00000504110 FYCO1Q9BQS8 1478 aa25.02■■□□□ 1.6
C4orf3-202ENST00000504110 KDM5BQ9UGL1 1544 aa25.02■■□□□ 1.6
C4orf3-202ENST00000504110 NPM1P06748 294 aaKnown RBP eCLIP25.01■■□□□ 1.59
C4orf3-202ENST00000504110 ATP1B4Q9UN42 357 aaPredicted RBP24.98■■□□□ 1.59
C4orf3-202ENST00000504110 ZCCHC11Q5TAX3 1644 aaKnown RBP24.97■■□□□ 1.59
C4orf3-202ENST00000504110 ATP10BO94823 1461 aa24.96■■□□□ 1.59
C4orf3-202ENST00000504110 EPRSP07814 1512 aaKnown RBP24.94■■□□□ 1.58
C4orf3-202ENST00000504110 LRRIQ1Q96JM4 1722 aa24.93■■□□□ 1.58
C4orf3-202ENST00000504110 CCDC18Q5T9S5 1454 aa24.92■■□□□ 1.58
C4orf3-202ENST00000504110 ARID3CA6NKF2 412 aa24.91■■□□□ 1.58
C4orf3-202ENST00000504110 MAPKBP1O60336 1514 aa24.9■■□□□ 1.58
C4orf3-202ENST00000504110 CDK13Q14004 1512 aaKnown RBP24.89■■□□□ 1.57
C4orf3-202ENST00000504110 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.88■■□□□ 1.57
C4orf3-202ENST00000504110 HNRNPUL2Q1KMD3 747 aaKnown RBP24.88■■□□□ 1.57
C4orf3-202ENST00000504110 ASXL2Q76L83 1435 aa24.83■■□□□ 1.57
C4orf3-202ENST00000504110 CDK11AQ9UQ88 783 aaPredicted RBP24.81■■□□□ 1.56
C4orf3-202ENST00000504110 CFAP43Q8NDM7 1665 aa24.8■■□□□ 1.56
C4orf3-202ENST00000504110 MAP3K1Q13233 1512 aa24.8■■□□□ 1.56
C4orf3-202ENST00000504110 WDR7Q9Y4E6 1490 aa24.79■■□□□ 1.56
C4orf3-202ENST00000504110 PLEKHD1A6NEE1 506 aa24.79■■□□□ 1.56
C4orf3-202ENST00000504110 TIAM1Q13009 1591 aa24.78■■□□□ 1.56
C4orf3-202ENST00000504110 APLP2Q06481 763 aa24.77■■□□□ 1.56
C4orf3-202ENST00000504110 TROQ12816 1431 aaPredicted RBP24.73■■□□□ 1.55
C4orf3-202ENST00000504110 MAGI3Q5TCQ9 1506 aa24.71■■□□□ 1.55
C4orf3-202ENST00000504110 ABCC10Q5T3U5 1492 aa24.7■■□□□ 1.55
C4orf3-202ENST00000504110 DIP2BQ9P265 1576 aa24.69■■□□□ 1.54
C4orf3-202ENST00000504110 MTUS2Q5JR59 1369 aa24.68■■□□□ 1.54
C4orf3-202ENST00000504110 EHBP1L1Q8N3D4 1523 aa24.68■■□□□ 1.54
C4orf3-202ENST00000504110 KCNH8Q96L42 1107 aa24.67■■□□□ 1.54
C4orf3-202ENST00000504110 LRRC9Q6ZRR7 1453 aa24.66■■□□□ 1.54
C4orf3-202ENST00000504110 GLI2P10070 1586 aa24.66■■□□□ 1.54
C4orf3-202ENST00000504110 KIF13AQ9H1H9 1805 aa24.65■■□□□ 1.54
C4orf3-202ENST00000504110 KIF14Q15058 1648 aa24.64■■□□□ 1.54
C4orf3-202ENST00000504110 FAM69CQ0P6D2 419 aa24.62■■□□□ 1.53
C4orf3-202ENST00000504110 KANK4Q5T7N3 995 aaPredicted RBP24.61■■□□□ 1.53
C4orf3-202ENST00000504110 ABCA9Q8IUA7 1624 aa24.61■■□□□ 1.53
C4orf3-202ENST00000504110 TRHP20396 242 aaPredicted RBP24.59■■□□□ 1.53
C4orf3-202ENST00000504110 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.59■■□□□ 1.532e-12■■■□□ 17.5
C4orf3-202ENST00000504110 SUPT6HQ7KZ85 1726 aaKnown RBP24.58■■□□□ 1.52
C4orf3-202ENST00000504110 MAP3K4Q9Y6R4 1608 aa24.56■■□□□ 1.52
C4orf3-202ENST00000504110 TTC37Q6PGP7 1564 aa24.54■■□□□ 1.52
C4orf3-202ENST00000504110 CD109Q6YHK3 1445 aa24.52■■□□□ 1.52
C4orf3-202ENST00000504110 NCOA2Q15596 1464 aa24.51■■□□□ 1.51
C4orf3-202ENST00000504110 MYO5CQ9NQX4 1742 aa24.49■■□□□ 1.51
C4orf3-202ENST00000504110 TSPOAP1O95153 1857 aa24.47■■□□□ 1.51
C4orf3-202ENST00000504110 CDC42BPAQ5VT25 1732 aa24.46■■□□□ 1.51
C4orf3-202ENST00000504110 CCNB3Q8WWL7 1395 aa24.45■■□□□ 1.5
C4orf3-202ENST00000504110 ARAP3Q8WWN8 1544 aa24.45■■□□□ 1.5
C4orf3-202ENST00000504110 PLCH2O75038 1416 aa24.44■■□□□ 1.5
C4orf3-202ENST00000504110 PREX2Q70Z35 1606 aa24.44■■□□□ 1.5
C4orf3-202ENST00000504110 PPRC1Q5VV67 1664 aaKnown RBP24.43■■□□□ 1.5
C4orf3-202ENST00000504110 ITSN2Q9NZM3 1697 aa24.43■■□□□ 1.5
C4orf3-202ENST00000504110 PPARGC1BQ86YN6 1023 aaKnown RBP24.43■■□□□ 1.5
C4orf3-202ENST00000504110 GPATCH8Q9UKJ3 1502 aaKnown RBP24.43■■□□□ 1.5
C4orf3-202ENST00000504110 CDC42BPBQ9Y5S2 1711 aa24.41■■□□□ 1.5
C4orf3-202ENST00000504110 TEX14Q8IWB6 1497 aa24.41■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 140.8 ms