RNA–Protein interactions for RNA: ENST00000503842.5

PRDM2-213, Transcript of PR/SET domain 2, humanhuman

TSL 1 (best) BASIC

Gene PRDM2, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-213ENST00000503842 CUL7Q14999 1698 aa21.87■■□□□ 1.09
PRDM2-213ENST00000503842 CARMIL1Q5VZK9 1371 aa21.87■■□□□ 1.09
PRDM2-213ENST00000503842 KIF21BO75037 1637 aa21.86■■□□□ 1.09
PRDM2-213ENST00000503842 SNAPC4Q5SXM2 1469 aa21.84■■□□□ 1.09
PRDM2-213ENST00000503842 MAGI1Q96QZ7 1491 aaPredicted RBP21.83■■□□□ 1.09
PRDM2-213ENST00000503842 ADAMTS12P58397 1594 aa21.83■■□□□ 1.09
PRDM2-213ENST00000503842 FHAD1B1AJZ9 1412 aa21.81■■□□□ 1.08
PRDM2-213ENST00000503842 RAPGEF2Q9Y4G8 1499 aa21.8■■□□□ 1.08
PRDM2-213ENST00000503842 POTEDQ86YR6 584 aa21.8■■□□□ 1.08
PRDM2-213ENST00000503842 GOLGA3Q08378 1498 aa21.77■■□□□ 1.08
PRDM2-213ENST00000503842 LOC105371045A0A1W2PR82 267 aa21.74■■□□□ 1.07
PRDM2-213ENST00000503842 SYNJ2O15056 1496 aa21.73■■□□□ 1.07
PRDM2-213ENST00000503842 EHMT2Q96KQ7 1210 aa21.68■■□□□ 1.06
PRDM2-213ENST00000503842 GRIN2AQ12879 1464 aa21.67■■□□□ 1.06
PRDM2-213ENST00000503842 DCAF8L1A6NGE4 600 aa21.66■■□□□ 1.06
PRDM2-213ENST00000503842 SLC4A1APQ9BWU0 796 aaKnown RBP21.66■■□□□ 1.06
PRDM2-213ENST00000503842 CHMP7Q8WUX9 453 aaPredicted RBP21.64■■□□□ 1.05
PRDM2-213ENST00000503842 TNIKQ9UKE5 1360 aa21.62■■□□□ 1.05
PRDM2-213ENST00000503842 UBTFP17480 764 aaKnown RBP21.62■■□□□ 1.05
PRDM2-213ENST00000503842 CHD1O14646 1710 aa21.6■■□□□ 1.05
PRDM2-213ENST00000503842 FBLN2P98095 1184 aa21.59■■□□□ 1.05
PRDM2-213ENST00000503842 NUP160Q12769 1436 aa21.58■■□□□ 1.05
PRDM2-213ENST00000503842 CEP170Q5SW79 1584 aa21.54■■□□□ 1.04
PRDM2-213ENST00000503842 CTTNBP2Q8WZ74 1663 aa21.53■■□□□ 1.04
PRDM2-213ENST00000503842 KIAA0586Q9BVV6 1533 aa21.5■■□□□ 1.03
PRDM2-213ENST00000503842 IQGAP2Q13576 1575 aa21.46■■□□□ 1.03
PRDM2-213ENST00000503842 CEP162Q5TB80 1403 aa21.45■■□□□ 1.02
PRDM2-213ENST00000503842 CLASP1Q7Z460 1538 aa21.41■■□□□ 1.02
PRDM2-213ENST00000503842 CLIP1P30622 1438 aa21.39■■□□□ 1.02
PRDM2-213ENST00000503842 UGGT2Q9NYU1 1516 aa21.39■■□□□ 1.01
PRDM2-213ENST00000503842 OSCARQ8IYS5 282 aa21.36■■□□□ 1.01
PRDM2-213ENST00000503842 ARHGAP35Q9NRY4 1499 aa21.34■■□□□ 1.01
PRDM2-213ENST00000503842 RANGAP1P46060 587 aaPredicted RBP21.34■■□□□ 1.01
PRDM2-213ENST00000503842 EFCAB5A4FU69 1503 aa21.34■■□□□ 1.01
PRDM2-213ENST00000503842 SAMD9Q5K651 1589 aa21.33■■□□□ 1.01
PRDM2-213ENST00000503842 JPH4Q96JJ6 628 aa21.33■■□□□ 1.01
PRDM2-213ENST00000503842 SHROOM2Q13796 1616 aa21.33■■□□□ 1
PRDM2-213ENST00000503842 DISP1Q96F81 1524 aa21.29■■□□□ 1
PRDM2-213ENST00000503842 ARAP1Q96P48 1450 aa21.27■■□□□ 1
PRDM2-213ENST00000503842 KIAA0556O60303 1618 aa21.26■□□□□ 0.99
PRDM2-213ENST00000503842 PRG4Q92954 1404 aaPredicted RBP21.24■□□□□ 0.99
PRDM2-213ENST00000503842 FHOD3Q2V2M9 1422 aa21.22■□□□□ 0.99
PRDM2-213ENST00000503842 CARMIL2Q6F5E8 1435 aa21.22■□□□□ 0.99
PRDM2-213ENST00000503842 P3H3Q8IVL6 736 aa21.21■□□□□ 0.99
PRDM2-213ENST00000503842 ERCC6L2Q5T890 1561 aa21.17■□□□□ 0.98
PRDM2-213ENST00000503842 VPS8Q8N3P4 1428 aa21.16■□□□□ 0.98
PRDM2-213ENST00000503842 FMN1Q68DA7 1419 aa21.12■□□□□ 0.97
PRDM2-213ENST00000503842 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.07■□□□□ 0.96
PRDM2-213ENST00000503842 PTPRGP23470 1445 aa21.06■□□□□ 0.96
PRDM2-213ENST00000503842 CASKIN1Q8WXD9 1431 aa21.04■□□□□ 0.96
PRDM2-213ENST00000503842 PCF11O94913 1555 aaKnown RBP21.04■□□□□ 0.96
PRDM2-213ENST00000503842 ARHGEF11O15085 1522 aa21.04■□□□□ 0.96
PRDM2-213ENST00000503842 FYCO1Q9BQS8 1478 aa21.01■□□□□ 0.95
PRDM2-213ENST00000503842 ABCA8O94911 1581 aa21■□□□□ 0.95
PRDM2-213ENST00000503842 TTBK1Q5TCY1 1321 aaPredicted RBP21■□□□□ 0.95
PRDM2-213ENST00000503842 PLB1Q6P1J6 1458 aa20.99■□□□□ 0.95
PRDM2-213ENST00000503842 RAPGEF6Q8TEU7 1601 aa20.98■□□□□ 0.95
PRDM2-213ENST00000503842 RIMBP3CA6NJZ7 1639 aa20.96■□□□□ 0.95
PRDM2-213ENST00000503842 RIMBP3BA6NNM3 1639 aa20.96■□□□□ 0.95
PRDM2-213ENST00000503842 RIMBP3Q9UFD9 1639 aa20.96■□□□□ 0.95
PRDM2-213ENST00000503842 HECW1Q76N89 1606 aa20.95■□□□□ 0.94
PRDM2-213ENST00000503842 UACAQ9BZF9 1416 aa20.95■□□□□ 0.94
PRDM2-213ENST00000503842 NUP153P49790 1475 aaKnown RBP20.93■□□□□ 0.94
PRDM2-213ENST00000503842 SLC4A2P04920 1241 aa20.92■□□□□ 0.94
PRDM2-213ENST00000503842 UHRF1BP1LA0JNW5 1464 aa20.91■□□□□ 0.94
PRDM2-213ENST00000503842 ABCC2Q92887 1545 aa20.91■□□□□ 0.94
PRDM2-213ENST00000503842 MAP3K1Q13233 1512 aa20.9■□□□□ 0.94
PRDM2-213ENST00000503842 FOXD4L1Q9NU39 408 aa20.89■□□□□ 0.93
PRDM2-213ENST00000503842 LRRIQ1Q96JM4 1722 aa20.89■□□□□ 0.93
PRDM2-213ENST00000503842 EPRSP07814 1512 aaKnown RBP20.88■□□□□ 0.93
PRDM2-213ENST00000503842 ATP1B4Q9UN42 357 aaPredicted RBP20.88■□□□□ 0.93
PRDM2-213ENST00000503842 CCDC18Q5T9S5 1454 aa20.88■□□□□ 0.93
PRDM2-213ENST00000503842 TIAM1Q13009 1591 aa20.86■□□□□ 0.93
PRDM2-213ENST00000503842 CFAP43Q8NDM7 1665 aa20.86■□□□□ 0.93
PRDM2-213ENST00000503842 APLP2Q06481 763 aa20.85■□□□□ 0.93
PRDM2-213ENST00000503842 ADCY10Q96PN6 1610 aa20.84■□□□□ 0.93
PRDM2-213ENST00000503842 CDK13Q14004 1512 aaKnown RBP20.83■□□□□ 0.93
PRDM2-213ENST00000503842 ATP10BO94823 1461 aa20.82■□□□□ 0.92
PRDM2-213ENST00000503842 KDM5BQ9UGL1 1544 aa20.8■□□□□ 0.92
PRDM2-213ENST00000503842 ARID3CA6NKF2 412 aa20.79■□□□□ 0.92
PRDM2-213ENST00000503842 ZBTB22O15209 634 aa20.78■□□□□ 0.92
PRDM2-213ENST00000503842 CYB5RLQ6IPT4 315 aa20.78■□□□□ 0.92
PRDM2-213ENST00000503842 DNAJC5Q9H3Z4 198 aa20.78■□□□□ 0.92
PRDM2-213ENST00000503842 KANK4Q5T7N3 995 aaPredicted RBP20.77■□□□□ 0.92
PRDM2-213ENST00000503842 LRRC9Q6ZRR7 1453 aa20.76■□□□□ 0.91
PRDM2-213ENST00000503842 ZCCHC11Q5TAX3 1644 aaKnown RBP20.75■□□□□ 0.91
PRDM2-213ENST00000503842 MAGI3Q5TCQ9 1506 aa20.74■□□□□ 0.91
PRDM2-213ENST00000503842 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.71■□□□□ 0.91
PRDM2-213ENST00000503842 HNRNPUL2Q1KMD3 747 aaKnown RBP20.71■□□□□ 0.91
PRDM2-213ENST00000503842 PPARGC1BQ86YN6 1023 aaKnown RBP20.71■□□□□ 0.91
PRDM2-213ENST00000503842 CDK11AQ9UQ88 783 aaPredicted RBP20.71■□□□□ 0.91
PRDM2-213ENST00000503842 EHBP1L1Q8N3D4 1523 aa20.71■□□□□ 0.91
PRDM2-213ENST00000503842 MTUS2Q5JR59 1369 aa20.71■□□□□ 0.91
PRDM2-213ENST00000503842 TROQ12816 1431 aaPredicted RBP20.69■□□□□ 0.9
PRDM2-213ENST00000503842 PLEKHD1A6NEE1 506 aa20.66■□□□□ 0.9
PRDM2-213ENST00000503842 NPM1P06748 294 aaKnown RBP eCLIP20.64■□□□□ 0.89
PRDM2-213ENST00000503842 WDR7Q9Y4E6 1490 aa20.61■□□□□ 0.89
PRDM2-213ENST00000503842 SUPT6HQ7KZ85 1726 aaKnown RBP20.61■□□□□ 0.89
PRDM2-213ENST00000503842 ASXL2Q76L83 1435 aa20.61■□□□□ 0.89
PRDM2-213ENST00000503842 NCOA2Q15596 1464 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms