RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 CTTNBP2Q8WZ74 1663 aa5.32□□□□□ -1.56
NEDD4-204ENST00000503468 PBRM1Q86U86 1689 aa5.32□□□□□ -1.56
NEDD4-204ENST00000503468 LRRIQ1Q96JM4 1722 aa5.31□□□□□ -1.56
NEDD4-204ENST00000503468 ABCA6Q8N139 1617 aa5.3□□□□□ -1.56
NEDD4-204ENST00000503468 DEPDC5O75140 1603 aa5.29□□□□□ -1.56
NEDD4-204ENST00000503468 MRC2Q9UBG0 1479 aa5.29□□□□□ -1.56
NEDD4-204ENST00000503468 PTPN23Q9H3S7 1636 aa5.29□□□□□ -1.56
NEDD4-204ENST00000503468 MROH1Q8NDA8 1641 aa5.29□□□□□ -1.56
NEDD4-204ENST00000503468 TNIKQ9UKE5 1360 aa5.29□□□□□ -1.56
NEDD4-204ENST00000503468 ABCC2Q92887 1545 aa5.28□□□□□ -1.56
NEDD4-204ENST00000503468 PTPRGP23470 1445 aa5.28□□□□□ -1.56
NEDD4-204ENST00000503468 GRIN2BQ13224 1484 aa5.28□□□□□ -1.56
NEDD4-204ENST00000503468 DISP1Q96F81 1524 aa5.28□□□□□ -1.56
NEDD4-204ENST00000503468 FGD5Q6ZNL6 1462 aa5.28□□□□□ -1.56
NEDD4-204ENST00000503468 NCOA2Q15596 1464 aa5.27□□□□□ -1.57
NEDD4-204ENST00000503468 MAPKBP1O60336 1514 aa5.27□□□□□ -1.57
NEDD4-204ENST00000503468 ADGRL2O95490 1459 aa5.27□□□□□ -1.57
NEDD4-204ENST00000503468 KIAA0586Q9BVV6 1533 aa5.27□□□□□ -1.57
NEDD4-204ENST00000503468 EPRSP07814 1512 aaKnown RBP5.27□□□□□ -1.57
NEDD4-204ENST00000503468 PPRC1Q5VV67 1664 aaKnown RBP5.26□□□□□ -1.57
NEDD4-204ENST00000503468 IGF1RP08069 1367 aa5.25□□□□□ -1.57
NEDD4-204ENST00000503468 GAPVD1Q14C86 1478 aa5.25□□□□□ -1.57
NEDD4-204ENST00000503468 RRBP1Q9P2E9 1410 aaKnown RBP5.24□□□□□ -1.57
NEDD4-204ENST00000503468 TEX14Q8IWB6 1497 aa5.24□□□□□ -1.57
NEDD4-204ENST00000503468 SHANK2Q9UPX8 1470 aa5.24□□□□□ -1.57
NEDD4-204ENST00000503468 TMEM131LA2VDJ0 1609 aa5.24□□□□□ -1.57
NEDD4-204ENST00000503468 KDM5CP41229 1560 aa5.23□□□□□ -1.57
NEDD4-204ENST00000503468 ZMYM4Q5VZL5 1548 aa5.23□□□□□ -1.57
NEDD4-204ENST00000503468 ABCC10Q5T3U5 1492 aa5.23□□□□□ -1.57
NEDD4-204ENST00000503468 CEP164Q9UPV0 1460 aa5.23□□□□□ -1.57
NEDD4-204ENST00000503468 ARHGEF5Q12774 1597 aa5.23□□□□□ -1.57
NEDD4-204ENST00000503468 PRDM15P57071 1507 aaPredicted RBP5.23□□□□□ -1.57
NEDD4-204ENST00000503468 HRCP23327 699 aa5.23□□□□□ -1.57
NEDD4-204ENST00000503468 PLXNC1O60486 1568 aa5.23□□□□□ -1.57
NEDD4-204ENST00000503468 LMTK2Q8IWU2 1503 aa5.23□□□□□ -1.57
NEDD4-204ENST00000503468 PDS5BQ9NTI5 1447 aa5.23□□□□□ -1.57
NEDD4-204ENST00000503468 FANCD2Q9BXW9 1451 aa5.22□□□□□ -1.57
NEDD4-204ENST00000503468 LAMC1P11047 1609 aa5.22□□□□□ -1.57
NEDD4-204ENST00000503468 FHAD1B1AJZ9 1412 aa5.2□□□□□ -1.58
NEDD4-204ENST00000503468 FYCO1Q9BQS8 1478 aa5.2□□□□□ -1.58
NEDD4-204ENST00000503468 ABCA9Q8IUA7 1624 aa5.2□□□□□ -1.58
NEDD4-204ENST00000503468 KIAA0556O60303 1618 aa5.19□□□□□ -1.58
NEDD4-204ENST00000503468 PCF11O94913 1555 aaKnown RBP5.19□□□□□ -1.58
NEDD4-204ENST00000503468 SYNJ2O15056 1496 aa5.19□□□□□ -1.58
NEDD4-204ENST00000503468 MADDQ8WXG6 1647 aa5.19□□□□□ -1.58
NEDD4-204ENST00000503468 USP54Q70EL1 1684 aa5.18□□□□□ -1.58
NEDD4-204ENST00000503468 CROCC2H7BZ55 1655 aa5.18□□□□□ -1.58
NEDD4-204ENST00000503468 ARHGEF40Q8TER5 1519 aa5.18□□□□□ -1.58
NEDD4-204ENST00000503468 EIF2AK4Q9P2K8 1649 aaKnown RBP5.18□□□□□ -1.58
NEDD4-204ENST00000503468 DUOX2Q9NRD8 1548 aa5.17□□□□□ -1.58
NEDD4-204ENST00000503468 ARHGEF12Q9NZN5 1544 aa5.17□□□□□ -1.58
NEDD4-204ENST00000503468 AGLP35573 1532 aa5.17□□□□□ -1.58
NEDD4-204ENST00000503468 DENND4BO75064 1496 aaPredicted RBP5.17□□□□□ -1.58
NEDD4-204ENST00000503468 SYNMO15061 1565 aa5.17□□□□□ -1.58
NEDD4-204ENST00000503468 EFCAB6Q5THR3 1501 aa5.17□□□□□ -1.58
NEDD4-204ENST00000503468 RNF17Q9BXT8 1623 aaKnown RBP5.17□□□□□ -1.58
NEDD4-204ENST00000503468 GCC2Q8IWJ2 1684 aa5.17□□□□□ -1.58
NEDD4-204ENST00000503468 CEP162Q5TB80 1403 aa5.16□□□□□ -1.58
NEDD4-204ENST00000503468 PLB1Q6P1J6 1458 aa5.16□□□□□ -1.58
NEDD4-204ENST00000503468 INO80Q9ULG1 1556 aaPredicted RBP5.16□□□□□ -1.58
NEDD4-204ENST00000503468 ARHGAP35Q9NRY4 1499 aa5.16□□□□□ -1.58
NEDD4-204ENST00000503468 ARAP1Q96P48 1450 aa5.16□□□□□ -1.58
NEDD4-204ENST00000503468 TIAM1Q13009 1591 aa5.15□□□□□ -1.58
NEDD4-204ENST00000503468 UNC13BO14795 1591 aa5.15□□□□□ -1.59
NEDD4-204ENST00000503468 CASKIN1Q8WXD9 1431 aa5.15□□□□□ -1.59
NEDD4-204ENST00000503468 KIF14Q15058 1648 aa5.15□□□□□ -1.59
NEDD4-204ENST00000503468 GRIN2AQ12879 1464 aa5.14□□□□□ -1.59
NEDD4-204ENST00000503468 CEP170Q5SW79 1584 aa5.14□□□□□ -1.59
NEDD4-204ENST00000503468 PIK3C2BO00750 1634 aa5.14□□□□□ -1.59
NEDD4-204ENST00000503468 RAD54L2Q9Y4B4 1467 aa5.14□□□□□ -1.59
NEDD4-204ENST00000503468 MIA2Q96PC5 1412 aa5.13□□□□□ -1.59
NEDD4-204ENST00000503468 VPS8Q8N3P4 1428 aa5.13□□□□□ -1.59
NEDD4-204ENST00000503468 IQGAP3Q86VI3 1631 aa5.12□□□□□ -1.59
NEDD4-204ENST00000503468 KDM6BO15054 1643 aa5.11□□□□□ -1.59
NEDD4-204ENST00000503468 MBD5Q9P267 1494 aa5.11□□□□□ -1.59
NEDD4-204ENST00000503468 CCDC18Q5T9S5 1454 aa5.11□□□□□ -1.59
NEDD4-204ENST00000503468 KIAA1107Q9UPP5 1409 aa5.1□□□□□ -1.59
NEDD4-204ENST00000503468 LRRC7Q96NW7 1537 aa5.1□□□□□ -1.59
NEDD4-204ENST00000503468 KIAA1210Q9ULL0 1709 aa5.1□□□□□ -1.59
NEDD4-204ENST00000503468 NRXN1Q9ULB1 1477 aa5.1□□□□□ -1.59
NEDD4-204ENST00000503468 MAGI3Q5TCQ9 1506 aa5.09□□□□□ -1.59
NEDD4-204ENST00000503468 MAP3K4Q9Y6R4 1608 aa5.09□□□□□ -1.59
NEDD4-204ENST00000503468 RAPGEF6Q8TEU7 1601 aa5.09□□□□□ -1.59
NEDD4-204ENST00000503468 PREX2Q70Z35 1606 aa5.08□□□□□ -1.6
NEDD4-204ENST00000503468 KIF27Q86VH2 1401 aa5.08□□□□□ -1.6
NEDD4-204ENST00000503468 HECW2Q9P2P5 1572 aa5.08□□□□□ -1.6
NEDD4-204ENST00000503468 IFT172Q9UG01 1749 aa5.08□□□□□ -1.6
NEDD4-204ENST00000503468 ERVK-7P63135 1459 aa5.08□□□□□ -1.6
NEDD4-204ENST00000503468 FER1L4A9Z1Z3 1794 aa5.08□□□□□ -1.6
NEDD4-204ENST00000503468 LMTK3Q96Q04 1460 aa5.07□□□□□ -1.6
NEDD4-204ENST00000503468 POLR1AO95602 1720 aaPredicted RBP5.06□□□□□ -1.6
NEDD4-204ENST00000503468 UGGT1Q9NYU2 1555 aa5.06□□□□□ -1.6
NEDD4-204ENST00000503468 CLSPNQ9HAW4 1339 aa5.06□□□□□ -1.6
NEDD4-204ENST00000503468 ROCK1Q13464 1354 aa5.06□□□□□ -1.6
NEDD4-204ENST00000503468 ACIN1Q9UKV3 1341 aaKnown RBP5.06□□□□□ -1.6
NEDD4-204ENST00000503468 DNMT1P26358 1616 aaKnown RBP5.06□□□□□ -1.6
NEDD4-204ENST00000503468 NUP153P49790 1475 aaKnown RBP5.06□□□□□ -1.6
NEDD4-204ENST00000503468 ARHGAP31Q2M1Z3 1444 aa5.05□□□□□ -1.6
NEDD4-204ENST00000503468 CHIC1Q5VXU3 224 aa5.05□□□□□ -1.6
NEDD4-204ENST00000503468 HECW1Q76N89 1606 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms