RNA–Protein interactions for RNA: ENST00000502330.5

SPOCK3-204, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPOCK3, Length 2,180 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-204ENST00000502330 RAD54L2Q9Y4B4 1467 aa29.47■■■□□ 2.31
SPOCK3-204ENST00000502330 CUL7Q14999 1698 aa29.46■■■□□ 2.31
SPOCK3-204ENST00000502330 EFCAB5A4FU69 1503 aa29.46■■■□□ 2.31
SPOCK3-204ENST00000502330 GTF3C3Q9Y5Q9 886 aa29.45■■■□□ 2.31
SPOCK3-204ENST00000502330 CFAP43Q8NDM7 1665 aa29.43■■■□□ 2.3
SPOCK3-204ENST00000502330 LAMC3Q9Y6N6 1575 aa29.41■■■□□ 2.3
SPOCK3-204ENST00000502330 AQRO60306 1485 aaKnown RBP eCLIP29.41■■■□□ 2.3
SPOCK3-204ENST00000502330 NESP48681 1621 aa29.39■■■□□ 2.3
SPOCK3-204ENST00000502330 PCF11O94913 1555 aaKnown RBP29.38■■■□□ 2.29
SPOCK3-204ENST00000502330 FYCO1Q9BQS8 1478 aa29.37■■■□□ 2.29
SPOCK3-204ENST00000502330 PHLDB1Q86UU1 1377 aa29.36■■■□□ 2.29
SPOCK3-204ENST00000502330 RAB3GAP2Q9H2M9 1393 aa29.36■■■□□ 2.29
SPOCK3-204ENST00000502330 CASKIN1Q8WXD9 1431 aa29.35■■■□□ 2.29
SPOCK3-204ENST00000502330 SETD5Q9C0A6 1442 aa29.34■■■□□ 2.29
SPOCK3-204ENST00000502330 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.3■■■□□ 2.28
SPOCK3-204ENST00000502330 WDR97A6NE52 1622 aa29.3■■■□□ 2.28
SPOCK3-204ENST00000502330 URB2Q14146 1524 aaKnown RBP29.29■■■□□ 2.28
SPOCK3-204ENST00000502330 FHOD3Q2V2M9 1422 aa29.29■■■□□ 2.28
SPOCK3-204ENST00000502330 ITGAEP38570 1179 aa29.29■■■□□ 2.28
SPOCK3-204ENST00000502330 CTTNBP2Q8WZ74 1663 aa29.29■■■□□ 2.28
SPOCK3-204ENST00000502330 MAPKBP1O60336 1514 aa29.25■■■□□ 2.27
SPOCK3-204ENST00000502330 FMN1Q68DA7 1419 aa29.25■■■□□ 2.27
SPOCK3-204ENST00000502330 P3H3Q8IVL6 736 aa29.25■■■□□ 2.27
SPOCK3-204ENST00000502330 YTHDC1Q96MU7 727 aaKnown RBP29.22■■■□□ 2.27
SPOCK3-204ENST00000502330 ABCA5Q8WWZ7 1642 aa29.22■■■□□ 2.27
SPOCK3-204ENST00000502330 PDS5BQ9NTI5 1447 aa29.21■■■□□ 2.27
SPOCK3-204ENST00000502330 FAM50AQ14320 339 aaKnown RBP29.15■■■□□ 2.26
SPOCK3-204ENST00000502330 GAPVD1Q14C86 1478 aa29.14■■■□□ 2.26
SPOCK3-204ENST00000502330 SNAPC4Q5SXM2 1469 aa29.14■■■□□ 2.26
SPOCK3-204ENST00000502330 SAMD9Q5K651 1589 aa29.13■■■□□ 2.25
SPOCK3-204ENST00000502330 ATP1B4Q9UN42 357 aaPredicted RBP29.12■■■□□ 2.25
SPOCK3-204ENST00000502330 TIMELESSQ9UNS1 1208 aa29.12■■■□□ 2.25
SPOCK3-204ENST00000502330 TDRD9Q8NDG6 1382 aaKnown RBP29.09■■■□□ 2.25
SPOCK3-204ENST00000502330 THOC2Q8NI27 1593 aaKnown RBP29.04■■■□□ 2.24
SPOCK3-204ENST00000502330 FGD6Q6ZV73 1430 aa29.04■■■□□ 2.24
SPOCK3-204ENST00000502330 GRIN2BQ13224 1484 aa29■■■□□ 2.23
SPOCK3-204ENST00000502330 MTUS2Q5JR59 1369 aa28.97■■■□□ 2.23
SPOCK3-204ENST00000502330 TARBP1Q13395 1621 aaKnown RBP28.97■■■□□ 2.23
SPOCK3-204ENST00000502330 KIF21AQ7Z4S6 1674 aa28.93■■■□□ 2.22
SPOCK3-204ENST00000502330 SIN3AQ96ST3 1273 aa28.89■■■□□ 2.22
SPOCK3-204ENST00000502330 HFM1A2PYH4 1435 aa28.89■■■□□ 2.22
SPOCK3-204ENST00000502330 MYOM3Q5VTT5 1437 aa28.88■■■□□ 2.21
SPOCK3-204ENST00000502330 EHBP1L1Q8N3D4 1523 aa28.88■■■□□ 2.21
SPOCK3-204ENST00000502330 NCOA2Q15596 1464 aa28.88■■■□□ 2.21
SPOCK3-204ENST00000502330 LRRIQ1Q96JM4 1722 aa28.87■■■□□ 2.21
SPOCK3-204ENST00000502330 SUPT6HQ7KZ85 1726 aaKnown RBP28.84■■■□□ 2.21
SPOCK3-204ENST00000502330 CCDC18Q5T9S5 1454 aa28.84■■■□□ 2.21
SPOCK3-204ENST00000502330 DNAJC5BQ9UF47 199 aa28.84■■■□□ 2.21
SPOCK3-204ENST00000502330 ARHGEF11O15085 1522 aa28.83■■■□□ 2.21
SPOCK3-204ENST00000502330 PPP1R15AO75807 674 aaPredicted RBP28.82■■■□□ 2.2
SPOCK3-204ENST00000502330 PTPRKQ15262 1439 aa28.82■■■□□ 2.2
SPOCK3-204ENST00000502330 UACAQ9BZF9 1416 aa28.81■■■□□ 2.2
SPOCK3-204ENST00000502330 UGGT2Q9NYU1 1516 aa28.79■■■□□ 2.2
SPOCK3-204ENST00000502330 PTPN23Q9H3S7 1636 aa28.78■■■□□ 2.2
SPOCK3-204ENST00000502330 PBRM1Q86U86 1689 aa28.77■■■□□ 2.2
SPOCK3-204ENST00000502330 NAIPQ13075 1403 aa28.75■■■□□ 2.19
SPOCK3-204ENST00000502330 MRC2Q9UBG0 1479 aa28.74■■■□□ 2.19
SPOCK3-204ENST00000502330 ADAMTS12P58397 1594 aa28.73■■■□□ 2.19
SPOCK3-204ENST00000502330 IQGAP2Q13576 1575 aa28.73■■■□□ 2.19
SPOCK3-204ENST00000502330 HECW1Q76N89 1606 aa28.73■■■□□ 2.19
SPOCK3-204ENST00000502330 TCOF1Q13428 1488 aaKnown RBP28.73■■■□□ 2.19
SPOCK3-204ENST00000502330 MAGI3Q5TCQ9 1506 aa28.7■■■□□ 2.18
SPOCK3-204ENST00000502330 EPRSP07814 1512 aaKnown RBP28.65■■■□□ 2.18
SPOCK3-204ENST00000502330 TONSLQ96HA7 1378 aa28.65■■■□□ 2.18
SPOCK3-204ENST00000502330 AKNAQ7Z591 1439 aa28.64■■■□□ 2.17
SPOCK3-204ENST00000502330 MIA2Q96PC5 1412 aa28.63■■■□□ 2.17
SPOCK3-204ENST00000502330 IFT140Q96RY7 1462 aa28.61■■■□□ 2.17
SPOCK3-204ENST00000502330 DDX10Q13206 875 aaKnown RBP28.6■■■□□ 2.17
SPOCK3-204ENST00000502330 WDR62O43379 1518 aa28.59■■■□□ 2.17
SPOCK3-204ENST00000502330 GCC2Q8IWJ2 1684 aa28.54■■■□□ 2.16
SPOCK3-204ENST00000502330 KIAA0586Q9BVV6 1533 aa28.51■■■□□ 2.16
SPOCK3-204ENST00000502330 CCER2I3L3R5 266 aa28.51■■■□□ 2.15
SPOCK3-204ENST00000502330 SUPT16HQ9Y5B9 1047 aaKnown RBP28.5■■■□□ 2.15
SPOCK3-204ENST00000502330 KCNH8Q96L42 1107 aa28.48■■■□□ 2.15
SPOCK3-204ENST00000502330 CDK13Q14004 1512 aaKnown RBP28.48■■■□□ 2.15
SPOCK3-204ENST00000502330 KDM5BQ9UGL1 1544 aa28.47■■■□□ 2.15
SPOCK3-204ENST00000502330 ZNF608Q9ULD9 1512 aaPredicted RBP28.45■■■□□ 2.14
SPOCK3-204ENST00000502330 RRP7BPQ9NSQ0 103 aa28.43■■■□□ 2.14
SPOCK3-204ENST00000502330 DISP1Q96F81 1524 aa28.43■■■□□ 2.14
SPOCK3-204ENST00000502330 KIAA0556O60303 1618 aa28.42■■■□□ 2.14
SPOCK3-204ENST00000502330 ANP32CO43423 234 aa28.41■■■□□ 2.14
SPOCK3-204ENST00000502330 DENND4BO75064 1496 aaPredicted RBP28.41■■■□□ 2.14
SPOCK3-204ENST00000502330 ROCK1Q13464 1354 aa28.4■■■□□ 2.14
SPOCK3-204ENST00000502330 CHIC2Q9UKJ5 165 aa28.38■■■□□ 2.13
SPOCK3-204ENST00000502330 HIRIP3Q9BW71 556 aaPredicted RBP28.37■■■□□ 2.13
SPOCK3-204ENST00000502330 GRIN2AQ12879 1464 aa28.37■■■□□ 2.13
SPOCK3-204ENST00000502330 NUP153P49790 1475 aaKnown RBP28.34■■■□□ 2.13
SPOCK3-204ENST00000502330 KDM6BO15054 1643 aa28.32■■■□□ 2.12
SPOCK3-204ENST00000502330 MPHOSPH9Q99550 1183 aa28.32■■■□□ 2.12
SPOCK3-204ENST00000502330 DAPK1P53355 1430 aa28.32■■■□□ 2.12
SPOCK3-204ENST00000502330 TRIM52Q96A61 297 aa28.31■■■□□ 2.12
SPOCK3-204ENST00000502330 CDK11AQ9UQ88 783 aaPredicted RBP28.31■■■□□ 2.12
SPOCK3-204ENST00000502330 RAPGEF6Q8TEU7 1601 aa28.31■■■□□ 2.12
SPOCK3-204ENST00000502330 EIF4G3O43432 1585 aaKnown RBP28.29■■■□□ 2.12
SPOCK3-204ENST00000502330 DNMT1P26358 1616 aaKnown RBP28.29■■■□□ 2.12
SPOCK3-204ENST00000502330 MAGI1Q96QZ7 1491 aaPredicted RBP28.28■■■□□ 2.12
SPOCK3-204ENST00000502330 ABCC5O15440 1437 aa28.27■■■□□ 2.12
SPOCK3-204ENST00000502330 ARID3CA6NKF2 412 aa28.2■■■□□ 2.11
SPOCK3-204ENST00000502330 TROQ12816 1431 aaPredicted RBP28.2■■■□□ 2.1
SPOCK3-204ENST00000502330 ANKRD30BQ9BXX2 1392 aa28.19■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms