RNA–Protein interactions for RNA: ENST00000502187.5

LINC01550-202, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 2 BASIC

Gene LINC01550, Length 2,455 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-202ENST00000502187 FHAD1B1AJZ9 1412 aa14.45□□□□□ -0.1
LINC01550-202ENST00000502187 SNAPC4Q5SXM2 1469 aa14.45□□□□□ -0.1
LINC01550-202ENST00000502187 SLC4A1APQ9BWU0 796 aaKnown RBP14.45□□□□□ -0.1
LINC01550-202ENST00000502187 CTTNBP2Q8WZ74 1663 aa14.44□□□□□ -0.1
LINC01550-202ENST00000502187 FBLN2P98095 1184 aa14.43□□□□□ -0.1
LINC01550-202ENST00000502187 MAGI1Q96QZ7 1491 aaPredicted RBP14.43□□□□□ -0.1
LINC01550-202ENST00000502187 CHMP7Q8WUX9 453 aaPredicted RBP14.39□□□□□ -0.11
LINC01550-202ENST00000502187 CLIP1P30622 1438 aa14.39□□□□□ -0.11
LINC01550-202ENST00000502187 SYNJ2O15056 1496 aa14.37□□□□□ -0.11
LINC01550-202ENST00000502187 GRIN2AQ12879 1464 aa14.36□□□□□ -0.11
LINC01550-202ENST00000502187 RANGAP1P46060 587 aaPredicted RBP14.35□□□□□ -0.11
LINC01550-202ENST00000502187 CHD1O14646 1710 aa14.3□□□□□ -0.12
LINC01550-202ENST00000502187 IQGAP2Q13576 1575 aa14.3□□□□□ -0.12
LINC01550-202ENST00000502187 ARHGAP35Q9NRY4 1499 aa14.28□□□□□ -0.12
LINC01550-202ENST00000502187 EFCAB5A4FU69 1503 aa14.28□□□□□ -0.12
LINC01550-202ENST00000502187 CEP170Q5SW79 1584 aa14.27□□□□□ -0.12
LINC01550-202ENST00000502187 ARAP1Q96P48 1450 aa14.26□□□□□ -0.13
LINC01550-202ENST00000502187 KIAA0586Q9BVV6 1533 aa14.25□□□□□ -0.13
LINC01550-202ENST00000502187 NUP160Q12769 1436 aa14.25□□□□□ -0.13
LINC01550-202ENST00000502187 VPS8Q8N3P4 1428 aa14.25□□□□□ -0.13
LINC01550-202ENST00000502187 SAMD9Q5K651 1589 aa14.24□□□□□ -0.13
LINC01550-202ENST00000502187 UGGT2Q9NYU1 1516 aa14.2□□□□□ -0.14
LINC01550-202ENST00000502187 FHOD3Q2V2M9 1422 aa14.18□□□□□ -0.14
LINC01550-202ENST00000502187 P3H3Q8IVL6 736 aa14.18□□□□□ -0.14
LINC01550-202ENST00000502187 OSCARQ8IYS5 282 aa14.18□□□□□ -0.14
LINC01550-202ENST00000502187 KIAA0556O60303 1618 aa14.15□□□□□ -0.14
LINC01550-202ENST00000502187 JPH4Q96JJ6 628 aa14.15□□□□□ -0.14
LINC01550-202ENST00000502187 SENP3Q9H4L4 574 aaPredicted RBP14.14□□□□□ -0.15
LINC01550-202ENST00000502187 FMN1Q68DA7 1419 aa14.13□□□□□ -0.15
LINC01550-202ENST00000502187 DISP1Q96F81 1524 aa14.12□□□□□ -0.15
LINC01550-202ENST00000502187 PCF11O94913 1555 aaKnown RBP14.12□□□□□ -0.15
LINC01550-202ENST00000502187 TTBK1Q5TCY1 1321 aaPredicted RBP14.11□□□□□ -0.15
LINC01550-202ENST00000502187 CLASP1Q7Z460 1538 aa14.1□□□□□ -0.15
LINC01550-202ENST00000502187 APLP2Q06481 763 aa14.1□□□□□ -0.15
LINC01550-202ENST00000502187 SHROOM2Q13796 1616 aa14.1□□□□□ -0.15
LINC01550-202ENST00000502187 CARMIL2Q6F5E8 1435 aa14.1□□□□□ -0.15
LINC01550-202ENST00000502187 FYCO1Q9BQS8 1478 aa14.08□□□□□ -0.16
LINC01550-202ENST00000502187 CASKIN1Q8WXD9 1431 aa14.07□□□□□ -0.16
LINC01550-202ENST00000502187 PRG4Q92954 1404 aaPredicted RBP14.05□□□□□ -0.16
LINC01550-202ENST00000502187 PPARGC1BQ86YN6 1023 aaKnown RBP14.05□□□□□ -0.16
LINC01550-202ENST00000502187 CFAP43Q8NDM7 1665 aa14.05□□□□□ -0.16
LINC01550-202ENST00000502187 TIAM1Q13009 1591 aa14.03□□□□□ -0.16
LINC01550-202ENST00000502187 HECW1Q76N89 1606 aa14.03□□□□□ -0.16
LINC01550-202ENST00000502187 MAP3K1Q13233 1512 aa14.02□□□□□ -0.16
LINC01550-202ENST00000502187 ATP1B4Q9UN42 357 aaPredicted RBP14.02□□□□□ -0.17
LINC01550-202ENST00000502187 LRRIQ1Q96JM4 1722 aa14.01□□□□□ -0.17
LINC01550-202ENST00000502187 RAPGEF6Q8TEU7 1601 aa14□□□□□ -0.17
LINC01550-202ENST00000502187 NCBP3Q53F19 620 aaKnown RBP13.99□□□□□ -0.17
LINC01550-202ENST00000502187 ERCC6L2Q5T890 1561 aa13.97□□□□□ -0.17
LINC01550-202ENST00000502187 CCDC18Q5T9S5 1454 aa13.97□□□□□ -0.17
LINC01550-202ENST00000502187 ZBTB22O15209 634 aa13.96□□□□□ -0.17
LINC01550-202ENST00000502187 TRIM26Q12899 539 aaPredicted RBP13.96□□□□□ -0.17
LINC01550-202ENST00000502187 PLB1Q6P1J6 1458 aa13.94□□□□□ -0.18
LINC01550-202ENST00000502187 LRRC9Q6ZRR7 1453 aa13.94□□□□□ -0.18
LINC01550-202ENST00000502187 KANK4Q5T7N3 995 aaPredicted RBP13.94□□□□□ -0.18
LINC01550-202ENST00000502187 PTPRGP23470 1445 aa13.94□□□□□ -0.18
LINC01550-202ENST00000502187 EPRSP07814 1512 aaKnown RBP13.94□□□□□ -0.18
LINC01550-202ENST00000502187 ABCA8O94911 1581 aa13.94□□□□□ -0.18
LINC01550-202ENST00000502187 ARID3CA6NKF2 412 aa13.92□□□□□ -0.18
LINC01550-202ENST00000502187 NUP153P49790 1475 aaKnown RBP13.92□□□□□ -0.18
LINC01550-202ENST00000502187 CDK13Q14004 1512 aaKnown RBP13.91□□□□□ -0.18
LINC01550-202ENST00000502187 PCGF6Q9BYE7 350 aa13.9□□□□□ -0.18
LINC01550-202ENST00000502187 EHBP1L1Q8N3D4 1523 aa13.89□□□□□ -0.19
LINC01550-202ENST00000502187 MTUS2Q5JR59 1369 aa13.88□□□□□ -0.19
LINC01550-202ENST00000502187 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.87□□□□□ -0.19
LINC01550-202ENST00000502187 HNRNPUL2Q1KMD3 747 aaKnown RBP13.87□□□□□ -0.19
LINC01550-202ENST00000502187 PPP6R1Q9UPN7 881 aa13.87□□□□□ -0.19
LINC01550-202ENST00000502187 UACAQ9BZF9 1416 aa13.87□□□□□ -0.19
LINC01550-202ENST00000502187 SUPT6HQ7KZ85 1726 aaKnown RBP13.86□□□□□ -0.19
LINC01550-202ENST00000502187 CYB5RLQ6IPT4 315 aa13.86□□□□□ -0.19
LINC01550-202ENST00000502187 ABCC2Q92887 1545 aa13.86□□□□□ -0.19
LINC01550-202ENST00000502187 MAGI3Q5TCQ9 1506 aa13.85□□□□□ -0.19
LINC01550-202ENST00000502187 ARHGEF11O15085 1522 aa13.84□□□□□ -0.19
LINC01550-202ENST00000502187 CDK11AQ9UQ88 783 aaPredicted RBP13.82□□□□□ -0.2
LINC01550-202ENST00000502187 UHRF1BP1LA0JNW5 1464 aa13.81□□□□□ -0.2
LINC01550-202ENST00000502187 ATP10BO94823 1461 aa13.81□□□□□ -0.2
LINC01550-202ENST00000502187 NCOA2Q15596 1464 aa13.8□□□□□ -0.2
LINC01550-202ENST00000502187 PRKCSHP14314 528 aaPredicted RBP13.8□□□□□ -0.2
LINC01550-202ENST00000502187 RRBP1Q9P2E9 1410 aaKnown RBP13.79□□□□□ -0.2
LINC01550-202ENST00000502187 PHLDB1Q86UU1 1377 aa13.79□□□□□ -0.2
LINC01550-202ENST00000502187 RIMBP3CA6NJZ7 1639 aa13.78□□□□□ -0.2
LINC01550-202ENST00000502187 RIMBP3BA6NNM3 1639 aa13.78□□□□□ -0.2
LINC01550-202ENST00000502187 RIMBP3Q9UFD9 1639 aa13.78□□□□□ -0.2
LINC01550-202ENST00000502187 TROQ12816 1431 aaPredicted RBP13.78□□□□□ -0.2
LINC01550-202ENST00000502187 ZCCHC11Q5TAX3 1644 aaKnown RBP13.78□□□□□ -0.2
LINC01550-202ENST00000502187 ADCY10Q96PN6 1610 aa13.78□□□□□ -0.2
LINC01550-202ENST00000502187 DNAJC5Q9H3Z4 198 aa13.76□□□□□ -0.21
LINC01550-202ENST00000502187 KDM5BQ9UGL1 1544 aa13.76□□□□□ -0.21
LINC01550-202ENST00000502187 NPM1P06748 294 aaKnown RBP eCLIP13.75□□□□□ -0.21
LINC01550-202ENST00000502187 CCNB3Q8WWL7 1395 aa13.75□□□□□ -0.21
LINC01550-202ENST00000502187 KIF14Q15058 1648 aa13.75□□□□□ -0.21
LINC01550-202ENST00000502187 PLEKHD1A6NEE1 506 aa13.74□□□□□ -0.21
LINC01550-202ENST00000502187 MYOM3Q5VTT5 1437 aa13.74□□□□□ -0.21
LINC01550-202ENST00000502187 ITSN2Q9NZM3 1697 aa13.72□□□□□ -0.21
LINC01550-202ENST00000502187 FGD6Q6ZV73 1430 aa13.72□□□□□ -0.21
LINC01550-202ENST00000502187 KCNH8Q96L42 1107 aa13.7□□□□□ -0.22
LINC01550-202ENST00000502187 PTPN23Q9H3S7 1636 aa13.69□□□□□ -0.22
LINC01550-202ENST00000502187 CDC42BPAQ5VT25 1732 aa13.67□□□□□ -0.22
LINC01550-202ENST00000502187 FAM50AQ14320 339 aaKnown RBP13.67□□□□□ -0.22
LINC01550-202ENST00000502187 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms