RNA–Protein interactions for RNA: ENST00000498641.1

GPATCH4-209, Transcript of G-patch domain containing 4, humanhuman

TSL 3

Gene GPATCH4, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-209ENST00000498641 SYNJ2O15056 1496 aa11.14□□□□□ -0.63
GPATCH4-209ENST00000498641 GRIN2AQ12879 1464 aa11.12□□□□□ -0.63
GPATCH4-209ENST00000498641 P3H3Q8IVL6 736 aa11.12□□□□□ -0.63
GPATCH4-209ENST00000498641 APLP2Q06481 763 aa11.11□□□□□ -0.63
GPATCH4-209ENST00000498641 ARHGAP35Q9NRY4 1499 aa11.11□□□□□ -0.63
GPATCH4-209ENST00000498641 VPS8Q8N3P4 1428 aa11.1□□□□□ -0.63
GPATCH4-209ENST00000498641 ARAP1Q96P48 1450 aa11.09□□□□□ -0.63
GPATCH4-209ENST00000498641 PPARGC1BQ86YN6 1023 aaKnown RBP11.09□□□□□ -0.63
GPATCH4-209ENST00000498641 CTTNBP2Q8WZ74 1663 aa11.08□□□□□ -0.64
GPATCH4-209ENST00000498641 KIAA0586Q9BVV6 1533 aa11.07□□□□□ -0.64
GPATCH4-209ENST00000498641 EFCAB5A4FU69 1503 aa11.06□□□□□ -0.64
GPATCH4-209ENST00000498641 IQGAP2Q13576 1575 aa11.06□□□□□ -0.64
GPATCH4-209ENST00000498641 NUP160Q12769 1436 aa11.04□□□□□ -0.64
GPATCH4-209ENST00000498641 FHOD3Q2V2M9 1422 aa11.04□□□□□ -0.64
GPATCH4-209ENST00000498641 ATP1B4Q9UN42 357 aaPredicted RBP11.04□□□□□ -0.64
GPATCH4-209ENST00000498641 TTBK1Q5TCY1 1321 aaPredicted RBP11.04□□□□□ -0.64
GPATCH4-209ENST00000498641 DNAJC5Q9H3Z4 198 aa11.03□□□□□ -0.64
GPATCH4-209ENST00000498641 CEP170Q5SW79 1584 aa11.03□□□□□ -0.64
GPATCH4-209ENST00000498641 TRIM26Q12899 539 aaPredicted RBP11.02□□□□□ -0.65
GPATCH4-209ENST00000498641 JPH4Q96JJ6 628 aa11.02□□□□□ -0.65
GPATCH4-209ENST00000498641 UGGT2Q9NYU1 1516 aa11□□□□□ -0.65
GPATCH4-209ENST00000498641 PCGF6Q9BYE7 350 aa11□□□□□ -0.65
GPATCH4-209ENST00000498641 FMN1Q68DA7 1419 aa11□□□□□ -0.65
GPATCH4-209ENST00000498641 SAMD9Q5K651 1589 aa10.99□□□□□ -0.65
GPATCH4-209ENST00000498641 CARMIL2Q6F5E8 1435 aa10.98□□□□□ -0.65
GPATCH4-209ENST00000498641 CHD1O14646 1710 aa10.97□□□□□ -0.65
GPATCH4-209ENST00000498641 CASKIN1Q8WXD9 1431 aa10.96□□□□□ -0.65
GPATCH4-209ENST00000498641 DISP1Q96F81 1524 aa10.95□□□□□ -0.66
GPATCH4-209ENST00000498641 FYCO1Q9BQS8 1478 aa10.93□□□□□ -0.66
GPATCH4-209ENST00000498641 PRG4Q92954 1404 aaPredicted RBP10.93□□□□□ -0.66
GPATCH4-209ENST00000498641 KANK4Q5T7N3 995 aaPredicted RBP10.93□□□□□ -0.66
GPATCH4-209ENST00000498641 KIAA0556O60303 1618 aa10.93□□□□□ -0.66
GPATCH4-209ENST00000498641 PCF11O94913 1555 aaKnown RBP10.93□□□□□ -0.66
GPATCH4-209ENST00000498641 OSCARQ8IYS5 282 aa10.92□□□□□ -0.66
GPATCH4-209ENST00000498641 MAP3K1Q13233 1512 aa10.89□□□□□ -0.67
GPATCH4-209ENST00000498641 ARID3CA6NKF2 412 aa10.89□□□□□ -0.67
GPATCH4-209ENST00000498641 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.88□□□□□ -0.67
GPATCH4-209ENST00000498641 PTPRGP23470 1445 aa10.88□□□□□ -0.67
GPATCH4-209ENST00000498641 TIAM1Q13009 1591 aa10.88□□□□□ -0.67
GPATCH4-209ENST00000498641 HNRNPUL2Q1KMD3 747 aaKnown RBP10.88□□□□□ -0.67
GPATCH4-209ENST00000498641 POTEDQ86YR6 584 aa10.88□□□□□ -0.67
GPATCH4-209ENST00000498641 CLASP1Q7Z460 1538 aa10.87□□□□□ -0.67
GPATCH4-209ENST00000498641 LRRC9Q6ZRR7 1453 aa10.87□□□□□ -0.67
GPATCH4-209ENST00000498641 HECW1Q76N89 1606 aa10.86□□□□□ -0.67
GPATCH4-209ENST00000498641 SHROOM2Q13796 1616 aa10.85□□□□□ -0.67
GPATCH4-209ENST00000498641 MTUS2Q5JR59 1369 aa10.85□□□□□ -0.67
GPATCH4-209ENST00000498641 CCDC18Q5T9S5 1454 aa10.85□□□□□ -0.67
GPATCH4-209ENST00000498641 SENP3Q9H4L4 574 aaPredicted RBP10.84□□□□□ -0.67
GPATCH4-209ENST00000498641 PLB1Q6P1J6 1458 aa10.84□□□□□ -0.67
GPATCH4-209ENST00000498641 EPRSP07814 1512 aaKnown RBP10.84□□□□□ -0.67
GPATCH4-209ENST00000498641 CDK11AQ9UQ88 783 aaPredicted RBP10.83□□□□□ -0.68
GPATCH4-209ENST00000498641 CFAP43Q8NDM7 1665 aa10.82□□□□□ -0.68
GPATCH4-209ENST00000498641 RAPGEF6Q8TEU7 1601 aa10.82□□□□□ -0.68
GPATCH4-209ENST00000498641 NUP153P49790 1475 aaKnown RBP10.81□□□□□ -0.68
GPATCH4-209ENST00000498641 ERCC6L2Q5T890 1561 aa10.81□□□□□ -0.68
GPATCH4-209ENST00000498641 CDK13Q14004 1512 aaKnown RBP10.8□□□□□ -0.68
GPATCH4-209ENST00000498641 UACAQ9BZF9 1416 aa10.79□□□□□ -0.68
GPATCH4-209ENST00000498641 ABCA8O94911 1581 aa10.78□□□□□ -0.68
GPATCH4-209ENST00000498641 PLEKHD1A6NEE1 506 aa10.77□□□□□ -0.69
GPATCH4-209ENST00000498641 EHBP1L1Q8N3D4 1523 aa10.77□□□□□ -0.69
GPATCH4-209ENST00000498641 PHLDB1Q86UU1 1377 aa10.77□□□□□ -0.69
GPATCH4-209ENST00000498641 CCNB3Q8WWL7 1395 aa10.76□□□□□ -0.69
GPATCH4-209ENST00000498641 LRRIQ1Q96JM4 1722 aa10.75□□□□□ -0.69
GPATCH4-209ENST00000498641 FAM50AQ14320 339 aaKnown RBP10.75□□□□□ -0.69
GPATCH4-209ENST00000498641 RRBP1Q9P2E9 1410 aaKnown RBP10.75□□□□□ -0.69
GPATCH4-209ENST00000498641 ATP10BO94823 1461 aa10.74□□□□□ -0.69
GPATCH4-209ENST00000498641 NCOA2Q15596 1464 aa10.74□□□□□ -0.69
GPATCH4-209ENST00000498641 MAGI3Q5TCQ9 1506 aa10.74□□□□□ -0.69
GPATCH4-209ENST00000498641 ITGAEP38570 1179 aa10.73□□□□□ -0.69
GPATCH4-209ENST00000498641 ABCC2Q92887 1545 aa10.73□□□□□ -0.69
GPATCH4-209ENST00000498641 TROQ12816 1431 aaPredicted RBP10.72□□□□□ -0.69
GPATCH4-209ENST00000498641 SUPT6HQ7KZ85 1726 aaKnown RBP10.72□□□□□ -0.69
GPATCH4-209ENST00000498641 UHRF1BP1LA0JNW5 1464 aa10.7□□□□□ -0.7
GPATCH4-209ENST00000498641 MYOM3Q5VTT5 1437 aa10.7□□□□□ -0.7
GPATCH4-209ENST00000498641 FGD6Q6ZV73 1430 aa10.69□□□□□ -0.7
GPATCH4-209ENST00000498641 NPM1P06748 294 aaKnown RBP eCLIP10.69□□□□□ -0.7
GPATCH4-209ENST00000498641 ARHGEF11O15085 1522 aa10.68□□□□□ -0.7
GPATCH4-209ENST00000498641 KCNH8Q96L42 1107 aa10.67□□□□□ -0.7
GPATCH4-209ENST00000498641 PHF23Q9BUL5 403 aaPredicted RBP10.67□□□□□ -0.7
GPATCH4-209ENST00000498641 CFDP1Q9UEE9 299 aaPredicted RBP10.66□□□□□ -0.7
GPATCH4-209ENST00000498641 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.65□□□□□ -0.7
GPATCH4-209ENST00000498641 KDM5BQ9UGL1 1544 aa10.65□□□□□ -0.7
GPATCH4-209ENST00000498641 MIA2Q96PC5 1412 aa10.65□□□□□ -0.7
GPATCH4-209ENST00000498641 CYB5RLQ6IPT4 315 aa10.64□□□□□ -0.71
GPATCH4-209ENST00000498641 ZNF777Q9ULD5 760 aaPredicted RBP10.64□□□□□ -0.71
GPATCH4-209ENST00000498641 KIF14Q15058 1648 aa10.63□□□□□ -0.71
GPATCH4-209ENST00000498641 ADCY10Q96PN6 1610 aa10.63□□□□□ -0.71
GPATCH4-209ENST00000498641 ZCCHC11Q5TAX3 1644 aaKnown RBP10.62□□□□□ -0.71
GPATCH4-209ENST00000498641 CCER1Q8TC90 406 aaPredicted RBP10.62□□□□□ -0.71
GPATCH4-209ENST00000498641 GPATCH8Q9UKJ3 1502 aaKnown RBP10.62□□□□□ -0.71
GPATCH4-209ENST00000498641 PTPN23Q9H3S7 1636 aa10.61□□□□□ -0.71
GPATCH4-209ENST00000498641 TCOF1Q13428 1488 aaKnown RBP10.61□□□□□ -0.71
GPATCH4-209ENST00000498641 ABCC10Q5T3U5 1492 aa10.61□□□□□ -0.71
GPATCH4-209ENST00000498641 ZNF644Q9H582 1327 aaPredicted RBP10.6□□□□□ -0.71
GPATCH4-209ENST00000498641 HRCP23327 699 aa10.59□□□□□ -0.71
GPATCH4-209ENST00000498641 RIMBP3CA6NJZ7 1639 aa10.58□□□□□ -0.72
GPATCH4-209ENST00000498641 RIMBP3BA6NNM3 1639 aa10.58□□□□□ -0.72
GPATCH4-209ENST00000498641 RIMBP3Q9UFD9 1639 aa10.58□□□□□ -0.72
GPATCH4-209ENST00000498641 WDR7Q9Y4E6 1490 aa10.58□□□□□ -0.72
GPATCH4-209ENST00000498641 CHIC2Q9UKJ5 165 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms