RNA–Protein interactions for RNA: ENST00000498187.6

NKX2-1-202, Transcript of NK2 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX2-1, Length 2,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-202ENST00000498187 MAP3K1Q13233 1512 aa28.8■■■□□ 2.2
NKX2-1-202ENST00000498187 ITGAEP38570 1179 aa28.75■■■□□ 2.19
NKX2-1-202ENST00000498187 TOPBP1Q92547 1522 aa28.74■■■□□ 2.19
NKX2-1-202ENST00000498187 ABCA10Q8WWZ4 1543 aa28.71■■■□□ 2.19
NKX2-1-202ENST00000498187 LRRC9Q6ZRR7 1453 aa28.7■■■□□ 2.19
NKX2-1-202ENST00000498187 FHAD1B1AJZ9 1412 aa28.66■■■□□ 2.18
NKX2-1-202ENST00000498187 POLA1P09884 1462 aaPredicted RBP28.66■■■□□ 2.18
NKX2-1-202ENST00000498187 RAB3GAP2Q9H2M9 1393 aa28.65■■■□□ 2.18
NKX2-1-202ENST00000498187 CFAP43Q8NDM7 1665 aa28.64■■■□□ 2.18
NKX2-1-202ENST00000498187 RAD54L2Q9Y4B4 1467 aa28.64■■■□□ 2.17
NKX2-1-202ENST00000498187 PCF11O94913 1555 aaKnown RBP28.63■■■□□ 2.17
NKX2-1-202ENST00000498187 PHLDB1Q86UU1 1377 aa28.61■■■□□ 2.17
NKX2-1-202ENST00000498187 P3H3Q8IVL6 736 aa28.59■■■□□ 2.17
NKX2-1-202ENST00000498187 PDS5BQ9NTI5 1447 aa28.58■■■□□ 2.17
NKX2-1-202ENST00000498187 MAPKBP1O60336 1514 aa28.56■■■□□ 2.16
NKX2-1-202ENST00000498187 SETD5Q9C0A6 1442 aa28.54■■■□□ 2.16
NKX2-1-202ENST00000498187 CUL7Q14999 1698 aa28.54■■■□□ 2.16
NKX2-1-202ENST00000498187 FHOD3Q2V2M9 1422 aa28.53■■■□□ 2.16
NKX2-1-202ENST00000498187 URB2Q14146 1524 aaKnown RBP28.53■■■□□ 2.16
NKX2-1-202ENST00000498187 WDR97A6NE52 1622 aa28.51■■■□□ 2.16
NKX2-1-202ENST00000498187 EFCAB5A4FU69 1503 aa28.51■■■□□ 2.15
NKX2-1-202ENST00000498187 FAM50AQ14320 339 aaKnown RBP28.49■■■□□ 2.15
NKX2-1-202ENST00000498187 ATP1B4Q9UN42 357 aaPredicted RBP28.49■■■□□ 2.15
NKX2-1-202ENST00000498187 CTTNBP2Q8WZ74 1663 aa28.49■■■□□ 2.15
NKX2-1-202ENST00000498187 FYCO1Q9BQS8 1478 aa28.48■■■□□ 2.15
NKX2-1-202ENST00000498187 CASKIN1Q8WXD9 1431 aa28.43■■■□□ 2.14
NKX2-1-202ENST00000498187 AQRO60306 1485 aaKnown RBP eCLIP28.42■■■□□ 2.14
NKX2-1-202ENST00000498187 ABCA5Q8WWZ7 1642 aa28.39■■■□□ 2.14
NKX2-1-202ENST00000498187 KIF21AQ7Z4S6 1674 aa28.38■■■□□ 2.13
NKX2-1-202ENST00000498187 FMN1Q68DA7 1419 aa28.32■■■□□ 2.12
NKX2-1-202ENST00000498187 SUPT16HQ9Y5B9 1047 aaKnown RBP28.32■■■□□ 2.12
NKX2-1-202ENST00000498187 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.3■■■□□ 2.12
NKX2-1-202ENST00000498187 SIN3AQ96ST3 1273 aa28.3■■■□□ 2.12
NKX2-1-202ENST00000498187 SNAPC4Q5SXM2 1469 aa28.29■■■□□ 2.12
NKX2-1-202ENST00000498187 GAPVD1Q14C86 1478 aa28.28■■■□□ 2.12
NKX2-1-202ENST00000498187 TDRD9Q8NDG6 1382 aaKnown RBP28.25■■■□□ 2.11
NKX2-1-202ENST00000498187 TARBP1Q13395 1621 aaKnown RBP28.23■■■□□ 2.11
NKX2-1-202ENST00000498187 SAMD9Q5K651 1589 aa28.23■■■□□ 2.11
NKX2-1-202ENST00000498187 FGD6Q6ZV73 1430 aa28.23■■■□□ 2.11
NKX2-1-202ENST00000498187 LRRIQ1Q96JM4 1722 aa28.19■■■□□ 2.1
NKX2-1-202ENST00000498187 MTUS2Q5JR59 1369 aa28.19■■■□□ 2.1
NKX2-1-202ENST00000498187 TIMELESSQ9UNS1 1208 aa28.17■■■□□ 2.1
NKX2-1-202ENST00000498187 ERCC6Q03468 1493 aa28.16■■■□□ 2.1
NKX2-1-202ENST00000498187 MRC2Q9UBG0 1479 aa28.15■■■□□ 2.1
NKX2-1-202ENST00000498187 GRIN2BQ13224 1484 aa28.12■■■□□ 2.09
NKX2-1-202ENST00000498187 CCDC18Q5T9S5 1454 aa28.09■■■□□ 2.09
NKX2-1-202ENST00000498187 THOC2Q8NI27 1593 aaKnown RBP28.09■■■□□ 2.09
NKX2-1-202ENST00000498187 NCOA2Q15596 1464 aa28.08■■■□□ 2.09
NKX2-1-202ENST00000498187 PTPRKQ15262 1439 aa28.08■■■□□ 2.09
NKX2-1-202ENST00000498187 HFM1A2PYH4 1435 aa28.06■■■□□ 2.08
NKX2-1-202ENST00000498187 PPP1R15AO75807 674 aaPredicted RBP28.06■■■□□ 2.08
NKX2-1-202ENST00000498187 KCNH8Q96L42 1107 aa28.06■■■□□ 2.08
NKX2-1-202ENST00000498187 DDX10Q13206 875 aaKnown RBP28.06■■■□□ 2.08
NKX2-1-202ENST00000498187 SUPT6HQ7KZ85 1726 aaKnown RBP28.05■■■□□ 2.08
NKX2-1-202ENST00000498187 MYOM3Q5VTT5 1437 aa28.05■■■□□ 2.08
NKX2-1-202ENST00000498187 PTPN23Q9H3S7 1636 aa28.05■■■□□ 2.08
NKX2-1-202ENST00000498187 PBRM1Q86U86 1689 aa28.05■■■□□ 2.08
NKX2-1-202ENST00000498187 EHBP1L1Q8N3D4 1523 aa28.03■■■□□ 2.08
NKX2-1-202ENST00000498187 UACAQ9BZF9 1416 aa28■■■□□ 2.07
NKX2-1-202ENST00000498187 WDR62O43379 1518 aa27.98■■■□□ 2.07
NKX2-1-202ENST00000498187 NAIPQ13075 1403 aa27.97■■■□□ 2.07
NKX2-1-202ENST00000498187 TONSLQ96HA7 1378 aa27.96■■■□□ 2.07
NKX2-1-202ENST00000498187 IFT140Q96RY7 1462 aa27.96■■■□□ 2.07
NKX2-1-202ENST00000498187 UGGT2Q9NYU1 1516 aa27.95■■■□□ 2.07
NKX2-1-202ENST00000498187 TSHZ2Q9NRE2 1034 aa27.95■■■□□ 2.07
NKX2-1-202ENST00000498187 ADAMTS12P58397 1594 aa27.95■■■□□ 2.06
NKX2-1-202ENST00000498187 HIRIP3Q9BW71 556 aaPredicted RBP27.95■■■□□ 2.06
NKX2-1-202ENST00000498187 MAGI3Q5TCQ9 1506 aa27.94■■■□□ 2.06
NKX2-1-202ENST00000498187 ARHGEF11O15085 1522 aa27.93■■■□□ 2.06
NKX2-1-202ENST00000498187 HECW1Q76N89 1606 aa27.88■■■□□ 2.05
NKX2-1-202ENST00000498187 IQGAP2Q13576 1575 aa27.86■■■□□ 2.05
NKX2-1-202ENST00000498187 TCOF1Q13428 1488 aaKnown RBP27.83■■■□□ 2.04
NKX2-1-202ENST00000498187 EPRSP07814 1512 aaKnown RBP27.8■■■□□ 2.04
NKX2-1-202ENST00000498187 GCC2Q8IWJ2 1684 aa27.79■■■□□ 2.04
NKX2-1-202ENST00000498187 CCER2I3L3R5 266 aa27.77■■■□□ 2.04
NKX2-1-202ENST00000498187 ANP32CO43423 234 aa27.77■■■□□ 2.04
NKX2-1-202ENST00000498187 RRP7BPQ9NSQ0 103 aa27.77■■■□□ 2.04
NKX2-1-202ENST00000498187 KDM5BQ9UGL1 1544 aa27.76■■■□□ 2.03
NKX2-1-202ENST00000498187 CHIC2Q9UKJ5 165 aa27.75■■■□□ 2.03
NKX2-1-202ENST00000498187 CDK13Q14004 1512 aaKnown RBP27.75■■■□□ 2.03
NKX2-1-202ENST00000498187 ZNF608Q9ULD9 1512 aaPredicted RBP27.74■■■□□ 2.03
NKX2-1-202ENST00000498187 FKBP8Q14318 412 aa27.73■■■□□ 2.03
NKX2-1-202ENST00000498187 AKNAQ7Z591 1439 aa27.7■■■□□ 2.03
NKX2-1-202ENST00000498187 MIA2Q96PC5 1412 aa27.69■■■□□ 2.02
NKX2-1-202ENST00000498187 KDM6BO15054 1643 aa27.68■■■□□ 2.02
NKX2-1-202ENST00000498187 DENND4BO75064 1496 aaPredicted RBP27.68■■■□□ 2.02
NKX2-1-202ENST00000498187 NEFLP07196 543 aa27.68■■■□□ 2.02
NKX2-1-202ENST00000498187 BCANQ96GW7 911 aa27.67■■■□□ 2.02
NKX2-1-202ENST00000498187 ANP32EQ9BTT0 268 aa27.67■■■□□ 2.02
NKX2-1-202ENST00000498187 EIF4G3O43432 1585 aaKnown RBP27.67■■■□□ 2.02
NKX2-1-202ENST00000498187 KIAA0586Q9BVV6 1533 aa27.66■■■□□ 2.02
NKX2-1-202ENST00000498187 ARID3CA6NKF2 412 aa27.66■■■□□ 2.02
NKX2-1-202ENST00000498187 TRIM52Q96A61 297 aa27.66■■■□□ 2.02
NKX2-1-202ENST00000498187 MAGI1Q96QZ7 1491 aaPredicted RBP27.61■■■□□ 2.01
NKX2-1-202ENST00000498187 GRIN2AQ12879 1464 aa27.6■■■□□ 2.01
NKX2-1-202ENST00000498187 KIAA0556O60303 1618 aa27.57■■■□□ 2
NKX2-1-202ENST00000498187 MPHOSPH9Q99550 1183 aa27.56■■■□□ 2
NKX2-1-202ENST00000498187 DISP1Q96F81 1524 aa27.54■■■□□ 2
NKX2-1-202ENST00000498187 HSPA5P11021 654 aaKnown RBP27.52■■■□□ 2
NKX2-1-202ENST00000498187 DAPK1P53355 1430 aa27.51■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms