RNA–Protein interactions for RNA: ENST00000497506.5

FAM3A-220, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 3

Gene FAM3A, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-220ENST00000497506 RIMBP3BA6NNM3 1639 aa27.04■■□□□ 1.92
FAM3A-220ENST00000497506 RIMBP3Q9UFD9 1639 aa27.04■■□□□ 1.92
FAM3A-220ENST00000497506 SHROOM2Q13796 1616 aa27■■□□□ 1.91
FAM3A-220ENST00000497506 KIAA0586Q9BVV6 1533 aa27■■□□□ 1.91
FAM3A-220ENST00000497506 JPH4Q96JJ6 628 aa26.92■■□□□ 1.9
FAM3A-220ENST00000497506 ERCC6L2Q5T890 1561 aa26.89■■□□□ 1.9
FAM3A-220ENST00000497506 IQGAP2Q13576 1575 aa26.88■■□□□ 1.89
FAM3A-220ENST00000497506 KIF21BO75037 1637 aa26.87■■□□□ 1.89
FAM3A-220ENST00000497506 CTTNBP2Q8WZ74 1663 aa26.86■■□□□ 1.89
FAM3A-220ENST00000497506 PRG4Q92954 1404 aaPredicted RBP26.85■■□□□ 1.89
FAM3A-220ENST00000497506 ARAP1Q96P48 1450 aa26.85■■□□□ 1.89
FAM3A-220ENST00000497506 CYB5RLQ6IPT4 315 aa26.77■■□□□ 1.88
FAM3A-220ENST00000497506 UGGT2Q9NYU1 1516 aa26.75■■□□□ 1.87
FAM3A-220ENST00000497506 GOLGA3Q08378 1498 aa26.7■■□□□ 1.87
FAM3A-220ENST00000497506 DISP1Q96F81 1524 aa26.69■■□□□ 1.86
FAM3A-220ENST00000497506 CARMIL2Q6F5E8 1435 aa26.67■■□□□ 1.86
FAM3A-220ENST00000497506 EHMT2Q96KQ7 1210 aa26.66■■□□□ 1.86
FAM3A-220ENST00000497506 KIAA0556O60303 1618 aa26.62■■□□□ 1.85
FAM3A-220ENST00000497506 UBTFP17480 764 aaKnown RBP26.6■■□□□ 1.85
FAM3A-220ENST00000497506 TNIKQ9UKE5 1360 aa26.58■■□□□ 1.85
FAM3A-220ENST00000497506 PTPRGP23470 1445 aa26.56■■□□□ 1.84
FAM3A-220ENST00000497506 SAMD9Q5K651 1589 aa26.53■■□□□ 1.84
FAM3A-220ENST00000497506 TTBK1Q5TCY1 1321 aaPredicted RBP26.49■■□□□ 1.83
FAM3A-220ENST00000497506 RANGAP1P46060 587 aaPredicted RBP26.48■■□□□ 1.83
FAM3A-220ENST00000497506 P3H3Q8IVL6 736 aa26.45■■□□□ 1.82
FAM3A-220ENST00000497506 ADCY10Q96PN6 1610 aa26.44■■□□□ 1.82
FAM3A-220ENST00000497506 EFCAB5A4FU69 1503 aa26.43■■□□□ 1.82
FAM3A-220ENST00000497506 UACAQ9BZF9 1416 aa26.39■■□□□ 1.81
FAM3A-220ENST00000497506 UHRF1BP1LA0JNW5 1464 aa26.36■■□□□ 1.81
FAM3A-220ENST00000497506 FHOD3Q2V2M9 1422 aa26.36■■□□□ 1.81
FAM3A-220ENST00000497506 ARHGAP35Q9NRY4 1499 aa26.35■■□□□ 1.81
FAM3A-220ENST00000497506 ABCC2Q92887 1545 aa26.34■■□□□ 1.81
FAM3A-220ENST00000497506 LOC105371045A0A1W2PR82 267 aa26.34■■□□□ 1.81
FAM3A-220ENST00000497506 PLB1Q6P1J6 1458 aa26.34■■□□□ 1.81
FAM3A-220ENST00000497506 ABCA8O94911 1581 aa26.33■■□□□ 1.81
FAM3A-220ENST00000497506 NPM1P06748 294 aaKnown RBP eCLIP26.27■■□□□ 1.8
FAM3A-220ENST00000497506 KDM5BQ9UGL1 1544 aa26.24■■□□□ 1.79
FAM3A-220ENST00000497506 CLIP1P30622 1438 aa26.23■■□□□ 1.79
FAM3A-220ENST00000497506 RAPGEF6Q8TEU7 1601 aa26.22■■□□□ 1.79
FAM3A-220ENST00000497506 MAPKBP1O60336 1514 aa26.22■■□□□ 1.79
FAM3A-220ENST00000497506 ZCCHC11Q5TAX3 1644 aaKnown RBP26.2■■□□□ 1.78
FAM3A-220ENST00000497506 CEP162Q5TB80 1403 aa26.17■■□□□ 1.78
FAM3A-220ENST00000497506 FMN1Q68DA7 1419 aa26.16■■□□□ 1.78
FAM3A-220ENST00000497506 NUP153P49790 1475 aaKnown RBP26.13■■□□□ 1.77
FAM3A-220ENST00000497506 TRHP20396 242 aaPredicted RBP26.12■■□□□ 1.77
FAM3A-220ENST00000497506 ATP10BO94823 1461 aa26.11■■□□□ 1.77
FAM3A-220ENST00000497506 ASXL2Q76L83 1435 aa26.11■■□□□ 1.77
FAM3A-220ENST00000497506 ARID3CA6NKF2 412 aa26.08■■□□□ 1.77
FAM3A-220ENST00000497506 KIF13AQ9H1H9 1805 aa26.07■■□□□ 1.76
FAM3A-220ENST00000497506 ABCC10Q5T3U5 1492 aa26.07■■□□□ 1.76
FAM3A-220ENST00000497506 DIP2BQ9P265 1576 aa26.04■■□□□ 1.76
FAM3A-220ENST00000497506 HECW1Q76N89 1606 aa26.03■■□□□ 1.76
FAM3A-220ENST00000497506 PCF11O94913 1555 aaKnown RBP26.01■■□□□ 1.75
FAM3A-220ENST00000497506 WDR7Q9Y4E6 1490 aa26■■□□□ 1.75
FAM3A-220ENST00000497506 CASKIN1Q8WXD9 1431 aa26■■□□□ 1.75
FAM3A-220ENST00000497506 FAM69CQ0P6D2 419 aa25.98■■□□□ 1.75
FAM3A-220ENST00000497506 LRRIQ1Q96JM4 1722 aa25.97■■□□□ 1.75
FAM3A-220ENST00000497506 ATP1B4Q9UN42 357 aaPredicted RBP25.97■■□□□ 1.75
FAM3A-220ENST00000497506 EPRSP07814 1512 aaKnown RBP25.97■■□□□ 1.75
FAM3A-220ENST00000497506 CDK13Q14004 1512 aaKnown RBP25.97■■□□□ 1.75
FAM3A-220ENST00000497506 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.95■■□□□ 1.74
FAM3A-220ENST00000497506 HNRNPUL2Q1KMD3 747 aaKnown RBP25.95■■□□□ 1.74
FAM3A-220ENST00000497506 FYCO1Q9BQS8 1478 aa25.95■■□□□ 1.74
FAM3A-220ENST00000497506 GLI2P10070 1586 aa25.95■■□□□ 1.74
FAM3A-220ENST00000497506 KCNH8Q96L42 1107 aa25.89■■□□□ 1.74
FAM3A-220ENST00000497506 PLEKHD1A6NEE1 506 aa25.87■■□□□ 1.73
FAM3A-220ENST00000497506 CCDC18Q5T9S5 1454 aa25.85■■□□□ 1.73
FAM3A-220ENST00000497506 MAP3K4Q9Y6R4 1608 aa25.85■■□□□ 1.73
FAM3A-220ENST00000497506 VPS8Q8N3P4 1428 aa25.84■■□□□ 1.73
FAM3A-220ENST00000497506 TSPOAP1O95153 1857 aa25.83■■□□□ 1.72
FAM3A-220ENST00000497506 CFAP43Q8NDM7 1665 aa25.8■■□□□ 1.72
FAM3A-220ENST00000497506 ABCA9Q8IUA7 1624 aa25.79■■□□□ 1.72
FAM3A-220ENST00000497506 CDK11AQ9UQ88 783 aaPredicted RBP25.79■■□□□ 1.72
FAM3A-220ENST00000497506 PPRC1Q5VV67 1664 aaKnown RBP25.79■■□□□ 1.72
FAM3A-220ENST00000497506 MAGI3Q5TCQ9 1506 aa25.75■■□□□ 1.71
FAM3A-220ENST00000497506 TROQ12816 1431 aaPredicted RBP25.75■■□□□ 1.71
FAM3A-220ENST00000497506 CD109Q6YHK3 1445 aa25.74■■□□□ 1.71
FAM3A-220ENST00000497506 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.72■■□□□ 1.71
FAM3A-220ENST00000497506 KIF14Q15058 1648 aa25.7■■□□□ 1.7
FAM3A-220ENST00000497506 TTC37Q6PGP7 1564 aa25.69■■□□□ 1.7
FAM3A-220ENST00000497506 TEX14Q8IWB6 1497 aa25.66■■□□□ 1.7
FAM3A-220ENST00000497506 TIAM1Q13009 1591 aa25.65■■□□□ 1.7
FAM3A-220ENST00000497506 MAP3K1Q13233 1512 aa25.61■■□□□ 1.69
FAM3A-220ENST00000497506 MTUS2Q5JR59 1369 aa25.6■■□□□ 1.69
FAM3A-220ENST00000497506 EHBP1L1Q8N3D4 1523 aa25.58■■□□□ 1.69
FAM3A-220ENST00000497506 MYO5CQ9NQX4 1742 aa25.57■■□□□ 1.68
FAM3A-220ENST00000497506 KDM6BO15054 1643 aa25.55■■□□□ 1.68
FAM3A-220ENST00000497506 PLCH2O75038 1416 aa25.55■■□□□ 1.68
FAM3A-220ENST00000497506 LRRC9Q6ZRR7 1453 aa25.53■■□□□ 1.68
FAM3A-220ENST00000497506 NEO1Q92859 1461 aa25.53■■□□□ 1.68
FAM3A-220ENST00000497506 COL17A1Q9UMD9 1497 aaPredicted RBP25.53■■□□□ 1.68
FAM3A-220ENST00000497506 ARAP3Q8WWN8 1544 aa25.52■■□□□ 1.68
FAM3A-220ENST00000497506 KANK4Q5T7N3 995 aaPredicted RBP25.51■■□□□ 1.67
FAM3A-220ENST00000497506 FANCAO15360 1455 aa25.5■■□□□ 1.67
FAM3A-220ENST00000497506 CDC42BPAQ5VT25 1732 aa25.5■■□□□ 1.67
FAM3A-220ENST00000497506 CDC42BPBQ9Y5S2 1711 aa25.49■■□□□ 1.67
FAM3A-220ENST00000497506 PHLDB1Q86UU1 1377 aa25.49■■□□□ 1.67
FAM3A-220ENST00000497506 PREX2Q70Z35 1606 aa25.48■■□□□ 1.67
FAM3A-220ENST00000497506 CFAP74Q9C0B2 1584 aa25.48■■□□□ 1.67
FAM3A-220ENST00000497506 APLP2Q06481 763 aa25.48■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms