RNA–Protein interactions for RNA: ENST00000497221.1

DUSP28-205, Transcript of dual specificity phosphatase 28, humanhuman

TSL 2

Gene DUSP28, Length 488 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP28-205ENST00000497221 RSF1Q96T23 1441 aaPredicted RBP10.64□□□□□ -0.71
DUSP28-205ENST00000497221 PDS5BQ9NTI5 1447 aa10.61□□□□□ -0.71
DUSP28-205ENST00000497221 SPDYE1Q8NFV5 336 aaPredicted RBP10.61□□□□□ -0.71
DUSP28-205ENST00000497221 SPDYE2BA6NHP3 402 aa10.6□□□□□ -0.71
DUSP28-205ENST00000497221 SPDYE6P0CI01 402 aa10.6□□□□□ -0.71
DUSP28-205ENST00000497221 SPDYE2Q495Y8 402 aa10.6□□□□□ -0.71
DUSP28-205ENST00000497221 CADPSQ9ULU8 1353 aa10.6□□□□□ -0.71
DUSP28-205ENST00000497221 TOP2AP11388 1531 aaKnown RBP10.59□□□□□ -0.71
DUSP28-205ENST00000497221 THOC2Q8NI27 1593 aaKnown RBP10.59□□□□□ -0.71
DUSP28-205ENST00000497221 MKRN4PQ13434 485 aaPredicted RBP10.58□□□□□ -0.72
DUSP28-205ENST00000497221 FBLN2P98095 1184 aa10.54□□□□□ -0.72
DUSP28-205ENST00000497221 CHADLQ6NUI6 762 aa10.54□□□□□ -0.72
DUSP28-205ENST00000497221 PRDM2Q13029 1718 aa10.52□□□□□ -0.73
DUSP28-205ENST00000497221 MRC2Q9UBG0 1479 aa10.5□□□□□ -0.73
DUSP28-205ENST00000497221 CEP164Q9UPV0 1460 aa10.5□□□□□ -0.73
DUSP28-205ENST00000497221 FANCD2Q9BXW9 1451 aa10.49□□□□□ -0.73
DUSP28-205ENST00000497221 CFTRP13569 1480 aa10.49□□□□□ -0.73
DUSP28-205ENST00000497221 DNAJC5Q9H3Z4 198 aa10.48□□□□□ -0.73
DUSP28-205ENST00000497221 CCDC88BA6NC98 1476 aa10.47□□□□□ -0.73
DUSP28-205ENST00000497221 WDR62O43379 1518 aa10.46□□□□□ -0.74
DUSP28-205ENST00000497221 POTEMA6NI47 508 aa10.44□□□□□ -0.74
DUSP28-205ENST00000497221 CD44P16070 742 aaKnown RBP10.41□□□□□ -0.74
DUSP28-205ENST00000497221 OTUD5Q96G74 571 aa10.41□□□□□ -0.74
DUSP28-205ENST00000497221 DCBLD2Q96PD2 775 aa10.4□□□□□ -0.74
DUSP28-205ENST00000497221 SSUH2Q9Y2M2 353 aa10.4□□□□□ -0.74
DUSP28-205ENST00000497221 CLCN6P51797 869 aa10.39□□□□□ -0.75
DUSP28-205ENST00000497221 URB2Q14146 1524 aaKnown RBP10.38□□□□□ -0.75
DUSP28-205ENST00000497221 POTEGQ6S5H5 508 aa10.38□□□□□ -0.75
DUSP28-205ENST00000497221 ZNF692Q9BU19 519 aaPredicted RBP10.37□□□□□ -0.75
DUSP28-205ENST00000497221 SUPT5HO00267 1087 aaKnown RBP10.36□□□□□ -0.75
DUSP28-205ENST00000497221 PRR29P0C7W0 189 aa10.35□□□□□ -0.75
DUSP28-205ENST00000497221 POTEB2H3BUK9 544 aa10.31□□□□□ -0.76
DUSP28-205ENST00000497221 TOPBP1Q92547 1522 aa10.31□□□□□ -0.76
DUSP28-205ENST00000497221 ABCC8Q09428 1581 aa10.31□□□□□ -0.76
DUSP28-205ENST00000497221 FARP1Q9Y4F1 1045 aaPredicted RBP10.3□□□□□ -0.76
DUSP28-205ENST00000497221 DNMBPQ6XZF7 1577 aa10.3□□□□□ -0.76
DUSP28-205ENST00000497221 PCDH10Q9P2E7 1040 aa10.28□□□□□ -0.76
DUSP28-205ENST00000497221 IFT140Q96RY7 1462 aa10.27□□□□□ -0.77
DUSP28-205ENST00000497221 SPDYE4A6NLX3 237 aa10.26□□□□□ -0.77
DUSP28-205ENST00000497221 PROM2Q8N271 834 aa10.24□□□□□ -0.77
DUSP28-205ENST00000497221 ZNF608Q9ULD9 1512 aaPredicted RBP10.23□□□□□ -0.77
DUSP28-205ENST00000497221 ZNF579Q8NAF0 562 aaKnown RBP10.22□□□□□ -0.77
DUSP28-205ENST00000497221 EIF4G3O43432 1585 aaKnown RBP10.22□□□□□ -0.77
DUSP28-205ENST00000497221 POLA1P09884 1462 aaPredicted RBP10.2□□□□□ -0.78
DUSP28-205ENST00000497221 TARBP1Q13395 1621 aaKnown RBP10.2□□□□□ -0.78
DUSP28-205ENST00000497221 GALR2O43603 387 aaPredicted RBP10.18□□□□□ -0.78
DUSP28-205ENST00000497221 CUX1P39880 1505 aa10.17□□□□□ -0.78
DUSP28-205ENST00000497221 AQRO60306 1485 aaKnown RBP eCLIP10.17□□□□□ -0.78
DUSP28-205ENST00000497221 FGD5Q6ZNL6 1462 aa10.17□□□□□ -0.78
DUSP28-205ENST00000497221 RAD54L2Q9Y4B4 1467 aa10.17□□□□□ -0.78
DUSP28-205ENST00000497221 SOGA1O94964 1423 aa10.17□□□□□ -0.78
DUSP28-205ENST00000497221 CHD1O14646 1710 aa10.16□□□□□ -0.78
DUSP28-205ENST00000497221 FKBP8Q14318 412 aa10.16□□□□□ -0.78
DUSP28-205ENST00000497221 TRIM41Q8WV44 630 aa10.15□□□□□ -0.78
DUSP28-205ENST00000497221 ZRANB1Q9UGI0 708 aa10.15□□□□□ -0.78
DUSP28-205ENST00000497221 TDRD9Q8NDG6 1382 aaKnown RBP10.13□□□□□ -0.79
DUSP28-205ENST00000497221 WDR97A6NE52 1622 aa10.11□□□□□ -0.79
DUSP28-205ENST00000497221 PBRM1Q86U86 1689 aa10.1□□□□□ -0.79
DUSP28-205ENST00000497221 LCE2DQ5TA82 110 aaPredicted RBP10.09□□□□□ -0.79
DUSP28-205ENST00000497221 RIMBP3CA6NJZ7 1639 aa10.08□□□□□ -0.8
DUSP28-205ENST00000497221 RIMBP3BA6NNM3 1639 aa10.08□□□□□ -0.8
DUSP28-205ENST00000497221 RIMBP3Q9UFD9 1639 aa10.08□□□□□ -0.8
DUSP28-205ENST00000497221 SNAPC4Q5SXM2 1469 aa10.08□□□□□ -0.8
DUSP28-205ENST00000497221 BIVM-ERCC5R4GMW8 1640 aa10.07□□□□□ -0.8
DUSP28-205ENST00000497221 PELP1Q8IZL8 1130 aaKnown RBP10.07□□□□□ -0.8
DUSP28-205ENST00000497221 TOP2BQ02880 1626 aa10.07□□□□□ -0.8
DUSP28-205ENST00000497221 WRNQ14191 1432 aaPredicted RBP eCLIP10.07□□□□□ -0.8
DUSP28-205ENST00000497221 GRIN2BQ13224 1484 aa10.06□□□□□ -0.8
DUSP28-205ENST00000497221 CHMP7Q8WUX9 453 aaPredicted RBP10.06□□□□□ -0.8
DUSP28-205ENST00000497221 SYNJ1O43426 1573 aa10.05□□□□□ -0.8
DUSP28-205ENST00000497221 GAPVD1Q14C86 1478 aa10.05□□□□□ -0.8
DUSP28-205ENST00000497221 MAGI1Q96QZ7 1491 aaPredicted RBP10.05□□□□□ -0.8
DUSP28-205ENST00000497221 ABCA10Q8WWZ4 1543 aa10.05□□□□□ -0.8
DUSP28-205ENST00000497221 ABCA5Q8WWZ7 1642 aa10.04□□□□□ -0.8
DUSP28-205ENST00000497221 ARHGEF11O15085 1522 aa10.03□□□□□ -0.8
DUSP28-205ENST00000497221 POTEJP0CG39 1038 aa10.03□□□□□ -0.8
DUSP28-205ENST00000497221 STAG3Q9UJ98 1225 aa10.01□□□□□ -0.81
DUSP28-205ENST00000497221 SYNJ2O15056 1496 aa10.01□□□□□ -0.81
DUSP28-205ENST00000497221 FAM163AQ96GL9 167 aaPredicted RBP10□□□□□ -0.81
DUSP28-205ENST00000497221 CYB5RLQ6IPT4 315 aa9.98□□□□□ -0.81
DUSP28-205ENST00000497221 CLASP1Q7Z460 1538 aa9.97□□□□□ -0.81
DUSP28-205ENST00000497221 PHF12Q96QT6 1004 aa9.96□□□□□ -0.82
DUSP28-205ENST00000497221 ADAMTS12P58397 1594 aa9.96□□□□□ -0.82
DUSP28-205ENST00000497221 METRNQ9UJH8 293 aa9.95□□□□□ -0.82
DUSP28-205ENST00000497221 MAMSTRQ6ZN01 415 aa9.94□□□□□ -0.82
DUSP28-205ENST00000497221 CREBZFQ9NS37 354 aa9.94□□□□□ -0.82
DUSP28-205ENST00000497221 ERICH3Q5RHP9 1530 aa9.93□□□□□ -0.82
DUSP28-205ENST00000497221 GRIN2AQ12879 1464 aa9.93□□□□□ -0.82
DUSP28-205ENST00000497221 ARAP1Q96P48 1450 aa9.93□□□□□ -0.82
DUSP28-205ENST00000497221 FHAD1B1AJZ9 1412 aa9.92□□□□□ -0.82
DUSP28-205ENST00000497221 C7P10643 843 aa9.9□□□□□ -0.82
DUSP28-205ENST00000497221 SLC39A7Q92504 469 aa9.9□□□□□ -0.82
DUSP28-205ENST00000497221 CEP170Q5SW79 1584 aa9.89□□□□□ -0.83
DUSP28-205ENST00000497221 ASTLQ6HA08 431 aaPredicted RBP9.89□□□□□ -0.83
DUSP28-205ENST00000497221 FBXO3Q9UK99 471 aa9.88□□□□□ -0.83
DUSP28-205ENST00000497221 PAK3O75914 559 aaPredicted RBP9.87□□□□□ -0.83
DUSP28-205ENST00000497221 NUP160Q12769 1436 aa9.87□□□□□ -0.83
DUSP28-205ENST00000497221 KIF27Q86VH2 1401 aa9.87□□□□□ -0.83
DUSP28-205ENST00000497221 ATMINO43313 823 aaPredicted RBP9.86□□□□□ -0.83
DUSP28-205ENST00000497221 CDAN1Q8IWY9 1227 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms