RNA–Protein interactions for RNA: ENST00000497073.1

TMC1-206, Transcript of transmembrane channel like 1, humanhuman

TSL 5

Gene TMC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-206ENST00000497073 CADPSQ9ULU8 1353 aa13.57□□□□□ -0.24
TMC1-206ENST00000497073 CUX2O14529 1486 aa13.55□□□□□ -0.24
TMC1-206ENST00000497073 POTEGQ6S5H5 508 aa13.54□□□□□ -0.24
TMC1-206ENST00000497073 OTUD5Q96G74 571 aa13.52□□□□□ -0.25
TMC1-206ENST00000497073 TOP2AP11388 1531 aaKnown RBP13.49□□□□□ -0.25
TMC1-206ENST00000497073 CD44P16070 742 aaKnown RBP13.44□□□□□ -0.26
TMC1-206ENST00000497073 DCBLD2Q96PD2 775 aa13.44□□□□□ -0.26
TMC1-206ENST00000497073 CLCN6P51797 869 aa13.42□□□□□ -0.26
TMC1-206ENST00000497073 CFTRP13569 1480 aa13.42□□□□□ -0.26
TMC1-206ENST00000497073 DNAJC5Q9H3Z4 198 aa13.41□□□□□ -0.26
TMC1-206ENST00000497073 PCDH10Q9P2E7 1040 aa13.4□□□□□ -0.26
TMC1-206ENST00000497073 CEP164Q9UPV0 1460 aa13.38□□□□□ -0.27
TMC1-206ENST00000497073 FANCD2Q9BXW9 1451 aa13.37□□□□□ -0.27
TMC1-206ENST00000497073 MRC2Q9UBG0 1479 aa13.37□□□□□ -0.27
TMC1-206ENST00000497073 POTEB2H3BUK9 544 aa13.37□□□□□ -0.27
TMC1-206ENST00000497073 CCDC88BA6NC98 1476 aa13.36□□□□□ -0.27
TMC1-206ENST00000497073 THOC2Q8NI27 1593 aaKnown RBP13.35□□□□□ -0.27
TMC1-206ENST00000497073 KIF21AQ7Z4S6 1674 aa13.34□□□□□ -0.27
TMC1-206ENST00000497073 SSUH2Q9Y2M2 353 aa13.33□□□□□ -0.28
TMC1-206ENST00000497073 SUPT5HO00267 1087 aaKnown RBP13.29□□□□□ -0.28
TMC1-206ENST00000497073 PRR29P0C7W0 189 aa13.29□□□□□ -0.28
TMC1-206ENST00000497073 WDR62O43379 1518 aa13.29□□□□□ -0.28
TMC1-206ENST00000497073 FBLN2P98095 1184 aa13.28□□□□□ -0.28
TMC1-206ENST00000497073 ZNF692Q9BU19 519 aaPredicted RBP13.26□□□□□ -0.29
TMC1-206ENST00000497073 FOXD4L1Q9NU39 408 aa13.26□□□□□ -0.29
TMC1-206ENST00000497073 FARP1Q9Y4F1 1045 aaPredicted RBP13.24□□□□□ -0.29
TMC1-206ENST00000497073 ABCC8Q09428 1581 aa13.2□□□□□ -0.3
TMC1-206ENST00000497073 ZNF579Q8NAF0 562 aaKnown RBP13.19□□□□□ -0.3
TMC1-206ENST00000497073 URB2Q14146 1524 aaKnown RBP13.18□□□□□ -0.3
TMC1-206ENST00000497073 PRDM2Q13029 1718 aa13.14□□□□□ -0.31
TMC1-206ENST00000497073 GALR2O43603 387 aaPredicted RBP13.14□□□□□ -0.31
TMC1-206ENST00000497073 MKRN4PQ13434 485 aaPredicted RBP13.14□□□□□ -0.31
TMC1-206ENST00000497073 LCE2DQ5TA82 110 aaPredicted RBP13.13□□□□□ -0.31
TMC1-206ENST00000497073 IFT140Q96RY7 1462 aa13.12□□□□□ -0.31
TMC1-206ENST00000497073 TOPBP1Q92547 1522 aa13.12□□□□□ -0.31
TMC1-206ENST00000497073 DNMBPQ6XZF7 1577 aa13.08□□□□□ -0.32
TMC1-206ENST00000497073 ZRANB1Q9UGI0 708 aa13.07□□□□□ -0.32
TMC1-206ENST00000497073 SOGA1O94964 1423 aa13.02□□□□□ -0.33
TMC1-206ENST00000497073 PELP1Q8IZL8 1130 aaKnown RBP13□□□□□ -0.33
TMC1-206ENST00000497073 ZNF608Q9ULD9 1512 aaPredicted RBP12.99□□□□□ -0.33
TMC1-206ENST00000497073 POLA1P09884 1462 aaPredicted RBP12.99□□□□□ -0.33
TMC1-206ENST00000497073 POTEJP0CG39 1038 aa12.99□□□□□ -0.33
TMC1-206ENST00000497073 FAM163AQ96GL9 167 aaPredicted RBP12.96□□□□□ -0.33
TMC1-206ENST00000497073 AQRO60306 1485 aaKnown RBP eCLIP12.95□□□□□ -0.34
TMC1-206ENST00000497073 FGD5Q6ZNL6 1462 aa12.95□□□□□ -0.34
TMC1-206ENST00000497073 RAD54L2Q9Y4B4 1467 aa12.94□□□□□ -0.34
TMC1-206ENST00000497073 ATXN8OSP0DMR3 200 aa12.94□□□□□ -0.34
TMC1-206ENST00000497073 TDRD9Q8NDG6 1382 aaKnown RBP12.94□□□□□ -0.34
TMC1-206ENST00000497073 CUX1P39880 1505 aa12.93□□□□□ -0.34
TMC1-206ENST00000497073 TARBP1Q13395 1621 aaKnown RBP12.92□□□□□ -0.34
TMC1-206ENST00000497073 EIF4G3O43432 1585 aaKnown RBP12.9□□□□□ -0.34
TMC1-206ENST00000497073 WRNQ14191 1432 aaPredicted RBP eCLIP12.89□□□□□ -0.35
TMC1-206ENST00000497073 CHMP7Q8WUX9 453 aaPredicted RBP12.89□□□□□ -0.35
TMC1-206ENST00000497073 WDR97A6NE52 1622 aa12.88□□□□□ -0.35
TMC1-206ENST00000497073 METRNQ9UJH8 293 aa12.87□□□□□ -0.35
TMC1-206ENST00000497073 GRIN2BQ13224 1484 aa12.86□□□□□ -0.35
TMC1-206ENST00000497073 MAMSTRQ6ZN01 415 aa12.86□□□□□ -0.35
TMC1-206ENST00000497073 TRIM41Q8WV44 630 aa12.85□□□□□ -0.35
TMC1-206ENST00000497073 GAPVD1Q14C86 1478 aa12.84□□□□□ -0.35
TMC1-206ENST00000497073 ABCA10Q8WWZ4 1543 aa12.83□□□□□ -0.35
TMC1-206ENST00000497073 PHF12Q96QT6 1004 aa12.83□□□□□ -0.36
TMC1-206ENST00000497073 SLC4A1APQ9BWU0 796 aaKnown RBP12.83□□□□□ -0.36
TMC1-206ENST00000497073 MAGI1Q96QZ7 1491 aaPredicted RBP12.83□□□□□ -0.36
TMC1-206ENST00000497073 CDAN1Q8IWY9 1227 aa12.82□□□□□ -0.36
TMC1-206ENST00000497073 SNAPC4Q5SXM2 1469 aa12.81□□□□□ -0.36
TMC1-206ENST00000497073 TOP2BQ02880 1626 aa12.8□□□□□ -0.36
TMC1-206ENST00000497073 SYNJ2O15056 1496 aa12.78□□□□□ -0.36
TMC1-206ENST00000497073 C7P10643 843 aa12.77□□□□□ -0.37
TMC1-206ENST00000497073 SLC39A7Q92504 469 aa12.77□□□□□ -0.37
TMC1-206ENST00000497073 ZBTB22O15209 634 aa12.76□□□□□ -0.37
TMC1-206ENST00000497073 ASTLQ6HA08 431 aaPredicted RBP12.76□□□□□ -0.37
TMC1-206ENST00000497073 BIVM-ERCC5R4GMW8 1640 aa12.76□□□□□ -0.37
TMC1-206ENST00000497073 SYNJ1O43426 1573 aa12.75□□□□□ -0.37
TMC1-206ENST00000497073 SCUBE2Q9NQ36 999 aa12.74□□□□□ -0.37
TMC1-206ENST00000497073 CREBZFQ9NS37 354 aa12.74□□□□□ -0.37
TMC1-206ENST00000497073 CYB5RLQ6IPT4 315 aa12.72□□□□□ -0.37
TMC1-206ENST00000497073 CHD1O14646 1710 aa12.71□□□□□ -0.37
TMC1-206ENST00000497073 ABCA5Q8WWZ7 1642 aa12.71□□□□□ -0.37
TMC1-206ENST00000497073 ATMINO43313 823 aaPredicted RBP12.71□□□□□ -0.37
TMC1-206ENST00000497073 ARHGEF11O15085 1522 aa12.71□□□□□ -0.38
TMC1-206ENST00000497073 FHAD1B1AJZ9 1412 aa12.71□□□□□ -0.38
TMC1-206ENST00000497073 ERICH3Q5RHP9 1530 aa12.68□□□□□ -0.38
TMC1-206ENST00000497073 RIMBP3CA6NJZ7 1639 aa12.68□□□□□ -0.38
TMC1-206ENST00000497073 RIMBP3BA6NNM3 1639 aa12.68□□□□□ -0.38
TMC1-206ENST00000497073 RIMBP3Q9UFD9 1639 aa12.68□□□□□ -0.38
TMC1-206ENST00000497073 PBRM1Q86U86 1689 aa12.67□□□□□ -0.38
TMC1-206ENST00000497073 PAK3O75914 559 aaPredicted RBP12.67□□□□□ -0.38
TMC1-206ENST00000497073 KIF27Q86VH2 1401 aa12.67□□□□□ -0.38
TMC1-206ENST00000497073 GRIN2AQ12879 1464 aa12.65□□□□□ -0.38
TMC1-206ENST00000497073 CLASP1Q7Z460 1538 aa12.63□□□□□ -0.39
TMC1-206ENST00000497073 MMRN1Q13201 1228 aa12.62□□□□□ -0.39
TMC1-206ENST00000497073 MS4A3Q96HJ5 214 aa12.62□□□□□ -0.39
TMC1-206ENST00000497073 ADAMTS12P58397 1594 aa12.61□□□□□ -0.39
TMC1-206ENST00000497073 IGF1RP08069 1367 aa12.61□□□□□ -0.39
TMC1-206ENST00000497073 NUP160Q12769 1436 aa12.6□□□□□ -0.39
TMC1-206ENST00000497073 ARAP1Q96P48 1450 aa12.59□□□□□ -0.39
TMC1-206ENST00000497073 JPH4Q96JJ6 628 aa12.58□□□□□ -0.4
TMC1-206ENST00000497073 CARMIL1Q5VZK9 1371 aa12.56□□□□□ -0.4
TMC1-206ENST00000497073 POTEFA5A3E0 1075 aa12.55□□□□□ -0.4
TMC1-206ENST00000497073 SPNS2Q8IVW8 549 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms