RNA–Protein interactions for RNA: ENST00000496492.5

TNIK-215, Transcript of TRAF2 and NCK interacting kinase, humanhuman

TSL 1 (best)

Gene TNIK, Length 2,736 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIK-215ENST00000496492 LAMC3Q9Y6N6 1575 aa11.09□□□□□ -0.63
TNIK-215ENST00000496492 LRRC9Q6ZRR7 1453 aa11.09□□□□□ -0.63
TNIK-215ENST00000496492 FHAD1B1AJZ9 1412 aa11.08□□□□□ -0.64
TNIK-215ENST00000496492 ABCA10Q8WWZ4 1543 aa11.07□□□□□ -0.64
TNIK-215ENST00000496492 PCF11O94913 1555 aaKnown RBP11.07□□□□□ -0.64
TNIK-215ENST00000496492 CUL7Q14999 1698 aa11.07□□□□□ -0.64
TNIK-215ENST00000496492 KIF21AQ7Z4S6 1674 aa11.06□□□□□ -0.64
TNIK-215ENST00000496492 CTTNBP2Q8WZ74 1663 aa11.06□□□□□ -0.64
TNIK-215ENST00000496492 YTHDC1Q96MU7 727 aaKnown RBP11.06□□□□□ -0.64
TNIK-215ENST00000496492 EFCAB5A4FU69 1503 aa11.05□□□□□ -0.64
TNIK-215ENST00000496492 MAPKBP1O60336 1514 aa11.05□□□□□ -0.64
TNIK-215ENST00000496492 PDS5BQ9NTI5 1447 aa11.04□□□□□ -0.64
TNIK-215ENST00000496492 TOPBP1Q92547 1522 aa11.04□□□□□ -0.64
TNIK-215ENST00000496492 WDR97A6NE52 1622 aa11.04□□□□□ -0.64
TNIK-215ENST00000496492 RAB3GAP2Q9H2M9 1393 aa11.04□□□□□ -0.64
TNIK-215ENST00000496492 AQRO60306 1485 aaKnown RBP eCLIP11.03□□□□□ -0.64
TNIK-215ENST00000496492 POLA1P09884 1462 aaPredicted RBP11.03□□□□□ -0.64
TNIK-215ENST00000496492 FYCO1Q9BQS8 1478 aa11.03□□□□□ -0.64
TNIK-215ENST00000496492 SETD5Q9C0A6 1442 aa11.02□□□□□ -0.64
TNIK-215ENST00000496492 ERCC6Q03468 1493 aa11.02□□□□□ -0.65
TNIK-215ENST00000496492 PHLDB1Q86UU1 1377 aa11.02□□□□□ -0.65
TNIK-215ENST00000496492 RAD54L2Q9Y4B4 1467 aa11.01□□□□□ -0.65
TNIK-215ENST00000496492 CASKIN1Q8WXD9 1431 aa11□□□□□ -0.65
TNIK-215ENST00000496492 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.99□□□□□ -0.65
TNIK-215ENST00000496492 URB2Q14146 1524 aaKnown RBP10.99□□□□□ -0.65
TNIK-215ENST00000496492 FHOD3Q2V2M9 1422 aa10.97□□□□□ -0.65
TNIK-215ENST00000496492 ITGAEP38570 1179 aa10.97□□□□□ -0.65
TNIK-215ENST00000496492 ABCA5Q8WWZ7 1642 aa10.96□□□□□ -0.65
TNIK-215ENST00000496492 SAMD9Q5K651 1589 aa10.95□□□□□ -0.66
TNIK-215ENST00000496492 SNAPC4Q5SXM2 1469 aa10.94□□□□□ -0.66
TNIK-215ENST00000496492 FMN1Q68DA7 1419 aa10.93□□□□□ -0.66
TNIK-215ENST00000496492 LRRIQ1Q96JM4 1722 aa10.93□□□□□ -0.66
TNIK-215ENST00000496492 TIMELESSQ9UNS1 1208 aa10.92□□□□□ -0.66
TNIK-215ENST00000496492 MRC2Q9UBG0 1479 aa10.92□□□□□ -0.66
TNIK-215ENST00000496492 THOC2Q8NI27 1593 aaKnown RBP10.92□□□□□ -0.66
TNIK-215ENST00000496492 P3H3Q8IVL6 736 aa10.92□□□□□ -0.66
TNIK-215ENST00000496492 FAM50AQ14320 339 aaKnown RBP10.91□□□□□ -0.66
TNIK-215ENST00000496492 FGD6Q6ZV73 1430 aa10.9□□□□□ -0.66
TNIK-215ENST00000496492 GRIN2BQ13224 1484 aa10.88□□□□□ -0.67
TNIK-215ENST00000496492 GAPVD1Q14C86 1478 aa10.87□□□□□ -0.67
TNIK-215ENST00000496492 SUPT6HQ7KZ85 1726 aaKnown RBP10.87□□□□□ -0.67
TNIK-215ENST00000496492 PTPN23Q9H3S7 1636 aa10.86□□□□□ -0.67
TNIK-215ENST00000496492 TDRD9Q8NDG6 1382 aaKnown RBP10.86□□□□□ -0.67
TNIK-215ENST00000496492 EHBP1L1Q8N3D4 1523 aa10.86□□□□□ -0.67
TNIK-215ENST00000496492 SIN3AQ96ST3 1273 aa10.86□□□□□ -0.67
TNIK-215ENST00000496492 ATP1B4Q9UN42 357 aaPredicted RBP10.86□□□□□ -0.67
TNIK-215ENST00000496492 TARBP1Q13395 1621 aaKnown RBP10.85□□□□□ -0.67
TNIK-215ENST00000496492 HFM1A2PYH4 1435 aa10.85□□□□□ -0.67
TNIK-215ENST00000496492 WDR62O43379 1518 aa10.84□□□□□ -0.67
TNIK-215ENST00000496492 CCDC18Q5T9S5 1454 aa10.84□□□□□ -0.67
TNIK-215ENST00000496492 ARHGEF11O15085 1522 aa10.84□□□□□ -0.67
TNIK-215ENST00000496492 MTUS2Q5JR59 1369 aa10.84□□□□□ -0.67
TNIK-215ENST00000496492 NCOA2Q15596 1464 aa10.84□□□□□ -0.67
TNIK-215ENST00000496492 MYOM3Q5VTT5 1437 aa10.83□□□□□ -0.68
TNIK-215ENST00000496492 PBRM1Q86U86 1689 aa10.83□□□□□ -0.68
TNIK-215ENST00000496492 UGGT2Q9NYU1 1516 aa10.83□□□□□ -0.68
TNIK-215ENST00000496492 PPP1R15AO75807 674 aaPredicted RBP10.83□□□□□ -0.68
TNIK-215ENST00000496492 PTPRKQ15262 1439 aa10.83□□□□□ -0.68
TNIK-215ENST00000496492 UACAQ9BZF9 1416 aa10.83□□□□□ -0.68
TNIK-215ENST00000496492 SUPT16HQ9Y5B9 1047 aaKnown RBP10.81□□□□□ -0.68
TNIK-215ENST00000496492 GCC2Q8IWJ2 1684 aa10.81□□□□□ -0.68
TNIK-215ENST00000496492 ZNF608Q9ULD9 1512 aaPredicted RBP10.8□□□□□ -0.68
TNIK-215ENST00000496492 NAIPQ13075 1403 aa10.8□□□□□ -0.68
TNIK-215ENST00000496492 HECW1Q76N89 1606 aa10.8□□□□□ -0.68
TNIK-215ENST00000496492 TCOF1Q13428 1488 aaKnown RBP10.79□□□□□ -0.68
TNIK-215ENST00000496492 MAGI3Q5TCQ9 1506 aa10.79□□□□□ -0.68
TNIK-215ENST00000496492 MYT1Q01538 1121 aa10.78□□□□□ -0.68
TNIK-215ENST00000496492 ADAMTS12P58397 1594 aa10.77□□□□□ -0.68
TNIK-215ENST00000496492 DDX10Q13206 875 aaKnown RBP10.77□□□□□ -0.69
TNIK-215ENST00000496492 KCNH8Q96L42 1107 aa10.77□□□□□ -0.69
TNIK-215ENST00000496492 KDM5BQ9UGL1 1544 aa10.77□□□□□ -0.69
TNIK-215ENST00000496492 IQGAP2Q13576 1575 aa10.76□□□□□ -0.69
TNIK-215ENST00000496492 AKNAQ7Z591 1439 aa10.76□□□□□ -0.69
TNIK-215ENST00000496492 TONSLQ96HA7 1378 aa10.76□□□□□ -0.69
TNIK-215ENST00000496492 CCER2I3L3R5 266 aa10.75□□□□□ -0.69
TNIK-215ENST00000496492 IFT140Q96RY7 1462 aa10.74□□□□□ -0.69
TNIK-215ENST00000496492 EPRSP07814 1512 aaKnown RBP10.73□□□□□ -0.69
TNIK-215ENST00000496492 MIA2Q96PC5 1412 aa10.72□□□□□ -0.69
TNIK-215ENST00000496492 EIF4G3O43432 1585 aaKnown RBP10.7□□□□□ -0.7
TNIK-215ENST00000496492 DENND4BO75064 1496 aaPredicted RBP10.7□□□□□ -0.7
TNIK-215ENST00000496492 FBLN2P98095 1184 aa10.7□□□□□ -0.7
TNIK-215ENST00000496492 ANP32CO43423 234 aa10.69□□□□□ -0.7
TNIK-215ENST00000496492 KDM6BO15054 1643 aa10.69□□□□□ -0.7
TNIK-215ENST00000496492 CDK13Q14004 1512 aaKnown RBP10.68□□□□□ -0.7
TNIK-215ENST00000496492 HIRIP3Q9BW71 556 aaPredicted RBP10.67□□□□□ -0.7
TNIK-215ENST00000496492 KIAA0556O60303 1618 aa10.66□□□□□ -0.7
TNIK-215ENST00000496492 DNMT1P26358 1616 aaKnown RBP10.66□□□□□ -0.7
TNIK-215ENST00000496492 ROCK1Q13464 1354 aa10.64□□□□□ -0.71
TNIK-215ENST00000496492 TSHZ2Q9NRE2 1034 aa10.64□□□□□ -0.71
TNIK-215ENST00000496492 RRP7BPQ9NSQ0 103 aa10.64□□□□□ -0.71
TNIK-215ENST00000496492 KIAA0586Q9BVV6 1533 aa10.64□□□□□ -0.71
TNIK-215ENST00000496492 RAPGEF6Q8TEU7 1601 aa10.64□□□□□ -0.71
TNIK-215ENST00000496492 DISP1Q96F81 1524 aa10.63□□□□□ -0.71
TNIK-215ENST00000496492 DAPK1P53355 1430 aa10.62□□□□□ -0.71
TNIK-215ENST00000496492 CHMP7Q8WUX9 453 aaPredicted RBP10.62□□□□□ -0.71
TNIK-215ENST00000496492 POLR1AO95602 1720 aaPredicted RBP10.61□□□□□ -0.71
TNIK-215ENST00000496492 CHIC2Q9UKJ5 165 aa10.61□□□□□ -0.71
TNIK-215ENST00000496492 NUP153P49790 1475 aaKnown RBP10.6□□□□□ -0.71
TNIK-215ENST00000496492 MPHOSPH9Q99550 1183 aa10.6□□□□□ -0.71
TNIK-215ENST00000496492 FKBP8Q14318 412 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms