RNA–Protein interactions for RNA: ENST00000496230.5

HCN3-204, Transcript of hyperpolarization activated cyclic nucleotide gated potassium channel 3, humanhuman

TSL 2

Gene HCN3, Length 3,245 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3-204ENST00000496230 MYT1Q01538 1121 aa17.64■□□□□ 0.41
HCN3-204ENST00000496230 CHIC2Q9UKJ5 165 aa17.64■□□□□ 0.41
HCN3-204ENST00000496230 GAPVD1Q14C86 1478 aa17.62■□□□□ 0.41
HCN3-204ENST00000496230 ERCC6Q03468 1493 aa17.61■□□□□ 0.41
HCN3-204ENST00000496230 CCNB3Q8WWL7 1395 aa17.59■□□□□ 0.41
HCN3-204ENST00000496230 KIF21AQ7Z4S6 1674 aa17.58■□□□□ 0.41
HCN3-204ENST00000496230 HIRIP3Q9BW71 556 aaPredicted RBP17.58■□□□□ 0.41
HCN3-204ENST00000496230 ZNF316A6NFI3 1004 aaPredicted RBP17.58■□□□□ 0.4
HCN3-204ENST00000496230 SIN3AQ96ST3 1273 aa17.58■□□□□ 0.4
HCN3-204ENST00000496230 ABCA10Q8WWZ4 1543 aa17.57■□□□□ 0.4
HCN3-204ENST00000496230 PHLDB1Q86UU1 1377 aa17.57■□□□□ 0.4
HCN3-204ENST00000496230 CHMP7Q8WUX9 453 aaPredicted RBP17.56■□□□□ 0.4
HCN3-204ENST00000496230 ZNF608Q9ULD9 1512 aaPredicted RBP17.55■□□□□ 0.4
HCN3-204ENST00000496230 PRDM2Q13029 1718 aa17.54■□□□□ 0.4
HCN3-204ENST00000496230 LAMC3Q9Y6N6 1575 aa17.54■□□□□ 0.4
HCN3-204ENST00000496230 MTUS2Q5JR59 1369 aa17.53■□□□□ 0.4
HCN3-204ENST00000496230 RRP7BPQ9NSQ0 103 aa17.51■□□□□ 0.39
HCN3-204ENST00000496230 MIER1Q8N108 512 aa17.48■□□□□ 0.39
HCN3-204ENST00000496230 DHX57Q6P158 1386 aaKnown RBP17.46■□□□□ 0.39
HCN3-204ENST00000496230 ZNF777Q9ULD5 760 aaPredicted RBP17.46■□□□□ 0.39
HCN3-204ENST00000496230 RAB3GAP2Q9H2M9 1393 aa17.46■□□□□ 0.39
HCN3-204ENST00000496230 FHAD1B1AJZ9 1412 aa17.44■□□□□ 0.38
HCN3-204ENST00000496230 LRRC9Q6ZRR7 1453 aa17.44■□□□□ 0.38
HCN3-204ENST00000496230 PCF11O94913 1555 aaKnown RBP17.43■□□□□ 0.38
HCN3-204ENST00000496230 TRIM52Q96A61 297 aa17.42■□□□□ 0.38
HCN3-204ENST00000496230 MRC2Q9UBG0 1479 aa17.38■□□□□ 0.37
HCN3-204ENST00000496230 TIAM1Q13009 1591 aa17.38■□□□□ 0.37
HCN3-204ENST00000496230 FOXD1Q16676 465 aa17.38■□□□□ 0.37
HCN3-204ENST00000496230 RRBP1Q9P2E9 1410 aaKnown RBP17.36■□□□□ 0.37
HCN3-204ENST00000496230 ZNF644Q9H582 1327 aaPredicted RBP17.36■□□□□ 0.37
HCN3-204ENST00000496230 SCAF1Q9H7N4 1312 aaKnown RBP17.34■□□□□ 0.37
HCN3-204ENST00000496230 FMN1Q68DA7 1419 aa17.33■□□□□ 0.36
HCN3-204ENST00000496230 SNAPC4Q5SXM2 1469 aa17.31■□□□□ 0.36
HCN3-204ENST00000496230 CNGB1Q14028 1251 aaPredicted RBP17.3■□□□□ 0.36
HCN3-204ENST00000496230 CASKIN1Q8WXD9 1431 aa17.3■□□□□ 0.36
HCN3-204ENST00000496230 SETD5Q9C0A6 1442 aa17.29■□□□□ 0.36
HCN3-204ENST00000496230 JPH4Q96JJ6 628 aa17.28■□□□□ 0.36
HCN3-204ENST00000496230 TARBP1Q13395 1621 aaKnown RBP17.28■□□□□ 0.36
HCN3-204ENST00000496230 GRIN2BQ13224 1484 aa17.28■□□□□ 0.36
HCN3-204ENST00000496230 CDK13Q14004 1512 aaKnown RBP17.27■□□□□ 0.36
HCN3-204ENST00000496230 ABCA5Q8WWZ7 1642 aa17.27■□□□□ 0.36
HCN3-204ENST00000496230 CUL7Q14999 1698 aa17.26■□□□□ 0.35
HCN3-204ENST00000496230 DDX10Q13206 875 aaKnown RBP17.25■□□□□ 0.35
HCN3-204ENST00000496230 PTPRKQ15262 1439 aa17.22■□□□□ 0.35
HCN3-204ENST00000496230 FYCO1Q9BQS8 1478 aa17.22■□□□□ 0.35
HCN3-204ENST00000496230 GTF3C3Q9Y5Q9 886 aa17.22■□□□□ 0.35
HCN3-204ENST00000496230 FGD6Q6ZV73 1430 aa17.21■□□□□ 0.35
HCN3-204ENST00000496230 NCOA2Q15596 1464 aa17.21■□□□□ 0.35
HCN3-204ENST00000496230 KCNH8Q96L42 1107 aa17.21■□□□□ 0.34
HCN3-204ENST00000496230 CTTNBP2Q8WZ74 1663 aa17.2■□□□□ 0.34
HCN3-204ENST00000496230 IFT140Q96RY7 1462 aa17.19■□□□□ 0.34
HCN3-204ENST00000496230 ACIN1Q9UKV3 1341 aaKnown RBP17.19■□□□□ 0.34
HCN3-204ENST00000496230 WDR97A6NE52 1622 aa17.18■□□□□ 0.34
HCN3-204ENST00000496230 ZNF326Q5BKZ1 582 aaKnown RBP17.17■□□□□ 0.34
HCN3-204ENST00000496230 CENPBP07199 599 aaPredicted RBP17.17■□□□□ 0.34
HCN3-204ENST00000496230 CFDP1Q9UEE9 299 aaPredicted RBP17.16■□□□□ 0.34
HCN3-204ENST00000496230 EFCAB5A4FU69 1503 aa17.16■□□□□ 0.34
HCN3-204ENST00000496230 IQGAP2Q13576 1575 aa17.14■□□□□ 0.34
HCN3-204ENST00000496230 PLB1Q6P1J6 1458 aa17.14■□□□□ 0.33
HCN3-204ENST00000496230 MAGI3Q5TCQ9 1506 aa17.14■□□□□ 0.33
HCN3-204ENST00000496230 PBRM1Q86U86 1689 aa17.14■□□□□ 0.33
HCN3-204ENST00000496230 PRG4Q92954 1404 aaPredicted RBP17.13■□□□□ 0.33
HCN3-204ENST00000496230 CDK11AQ9UQ88 783 aaPredicted RBP17.13■□□□□ 0.33
HCN3-204ENST00000496230 POLR3GLQ9BT43 218 aa17.11■□□□□ 0.33
HCN3-204ENST00000496230 MYOM3Q5VTT5 1437 aa17.11■□□□□ 0.33
HCN3-204ENST00000496230 GRIN2AQ12879 1464 aa17.11■□□□□ 0.33
HCN3-204ENST00000496230 EIF4G3O43432 1585 aaKnown RBP17.11■□□□□ 0.33
HCN3-204ENST00000496230 EPRSP07814 1512 aaKnown RBP17.1■□□□□ 0.33
HCN3-204ENST00000496230 ADAMTS12P58397 1594 aa17.1■□□□□ 0.33
HCN3-204ENST00000496230 TONSLQ96HA7 1378 aa17.09■□□□□ 0.33
HCN3-204ENST00000496230 PLEKHD1A6NEE1 506 aa17.09■□□□□ 0.33
HCN3-204ENST00000496230 THOC2Q8NI27 1593 aaKnown RBP17.08■□□□□ 0.32
HCN3-204ENST00000496230 WDR62O43379 1518 aa17.07■□□□□ 0.32
HCN3-204ENST00000496230 LRRIQ1Q96JM4 1722 aa17.07■□□□□ 0.32
HCN3-204ENST00000496230 HNRNPMP52272 730 aaKnown RBP eCLIP17.07■□□□□ 0.32
HCN3-204ENST00000496230 CLSPNQ9HAW4 1339 aa17.07■□□□□ 0.32
HCN3-204ENST00000496230 MAPKBP1O60336 1514 aa17.07■□□□□ 0.32
HCN3-204ENST00000496230 SLC4A1APQ9BWU0 796 aaKnown RBP17.06■□□□□ 0.32
HCN3-204ENST00000496230 CCDC18Q5T9S5 1454 aa17.06■□□□□ 0.32
HCN3-204ENST00000496230 KIAA0586Q9BVV6 1533 aa17.05■□□□□ 0.32
HCN3-204ENST00000496230 MAP3K1Q13233 1512 aa17.05■□□□□ 0.32
HCN3-204ENST00000496230 SAMD9Q5K651 1589 aa17.04■□□□□ 0.32
HCN3-204ENST00000496230 CFAP43Q8NDM7 1665 aa17.04■□□□□ 0.32
HCN3-204ENST00000496230 DISP1Q96F81 1524 aa17.04■□□□□ 0.32
HCN3-204ENST00000496230 PPP1R15AO75807 674 aaPredicted RBP17.04■□□□□ 0.32
HCN3-204ENST00000496230 MPHOSPH9Q99550 1183 aa17.03■□□□□ 0.32
HCN3-204ENST00000496230 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.03■□□□□ 0.322e-10■■■□□ 18.1
HCN3-204ENST00000496230 SENP3-EIF4A1A0A087X0R7 540 aa17■□□□□ 0.31
HCN3-204ENST00000496230 NAIPQ13075 1403 aa17■□□□□ 0.31
HCN3-204ENST00000496230 MYT1LQ9UL68 1186 aa17■□□□□ 0.31
HCN3-204ENST00000496230 SYNJ2O15056 1496 aa16.98■□□□□ 0.31
HCN3-204ENST00000496230 NUP153P49790 1475 aaKnown RBP16.98■□□□□ 0.31
HCN3-204ENST00000496230 KDM2AQ9Y2K7 1162 aa16.98■□□□□ 0.31
HCN3-204ENST00000496230 CEP170Q5SW79 1584 aa16.97■□□□□ 0.31
HCN3-204ENST00000496230 CARMIL2Q6F5E8 1435 aa16.97■□□□□ 0.31
HCN3-204ENST00000496230 L3MBTL2Q969R5 705 aa16.96■□□□□ 0.31
HCN3-204ENST00000496230 SUPT6HQ7KZ85 1726 aaKnown RBP16.95■□□□□ 0.3
HCN3-204ENST00000496230 PTPN23Q9H3S7 1636 aa16.94■□□□□ 0.3
HCN3-204ENST00000496230 PTPRGP23470 1445 aa16.94■□□□□ 0.3
HCN3-204ENST00000496230 EHBP1L1Q8N3D4 1523 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms