RNA–Protein interactions for RNA: ENST00000495953.2

RAPGEF3-215, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 3

Gene RAPGEF3, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-215ENST00000495953 ARAP1Q96P48 1450 aa25.52■■□□□ 1.68
RAPGEF3-215ENST00000495953 RAPGEF2Q9Y4G8 1499 aa25.52■■□□□ 1.68
RAPGEF3-215ENST00000495953 CYB5RLQ6IPT4 315 aa25.51■■□□□ 1.67
RAPGEF3-215ENST00000495953 KIF21BO75037 1637 aa25.45■■□□□ 1.67
RAPGEF3-215ENST00000495953 NUP160Q12769 1436 aa25.43■■□□□ 1.66
RAPGEF3-215ENST00000495953 ERCC6L2Q5T890 1561 aa25.42■■□□□ 1.66
RAPGEF3-215ENST00000495953 SHROOM2Q13796 1616 aa25.32■■□□□ 1.64
RAPGEF3-215ENST00000495953 GOLGA3Q08378 1498 aa25.32■■□□□ 1.64
RAPGEF3-215ENST00000495953 KIAA0586Q9BVV6 1533 aa25.29■■□□□ 1.64
RAPGEF3-215ENST00000495953 CTTNBP2Q8WZ74 1663 aa25.29■■□□□ 1.64
RAPGEF3-215ENST00000495953 IQGAP2Q13576 1575 aa25.22■■□□□ 1.63
RAPGEF3-215ENST00000495953 UBTFP17480 764 aaKnown RBP25.18■■□□□ 1.62
RAPGEF3-215ENST00000495953 TRHP20396 242 aaPredicted RBP25.18■■□□□ 1.62
RAPGEF3-215ENST00000495953 PRG4Q92954 1404 aaPredicted RBP25.14■■□□□ 1.62
RAPGEF3-215ENST00000495953 JPH4Q96JJ6 628 aa25.14■■□□□ 1.62
RAPGEF3-215ENST00000495953 EHMT2Q96KQ7 1210 aa25.11■■□□□ 1.61
RAPGEF3-215ENST00000495953 UGGT2Q9NYU1 1516 aa25.1■■□□□ 1.61
RAPGEF3-215ENST00000495953 TNIKQ9UKE5 1360 aa25.09■■□□□ 1.61
RAPGEF3-215ENST00000495953 CARMIL2Q6F5E8 1435 aa25.03■■□□□ 1.6
RAPGEF3-215ENST00000495953 LOC105371045A0A1W2PR82 267 aa25.02■■□□□ 1.6
RAPGEF3-215ENST00000495953 DISP1Q96F81 1524 aa24.97■■□□□ 1.59
RAPGEF3-215ENST00000495953 EFCAB5A4FU69 1503 aa24.96■■□□□ 1.59
RAPGEF3-215ENST00000495953 KIAA0556O60303 1618 aa24.96■■□□□ 1.59
RAPGEF3-215ENST00000495953 SAMD9Q5K651 1589 aa24.96■■□□□ 1.59
RAPGEF3-215ENST00000495953 ADCY10Q96PN6 1610 aa24.9■■□□□ 1.58
RAPGEF3-215ENST00000495953 RANGAP1P46060 587 aaPredicted RBP24.87■■□□□ 1.57
RAPGEF3-215ENST00000495953 CLIP1P30622 1438 aa24.86■■□□□ 1.57
RAPGEF3-215ENST00000495953 TTBK1Q5TCY1 1321 aaPredicted RBP24.86■■□□□ 1.57
RAPGEF3-215ENST00000495953 CEP162Q5TB80 1403 aa24.85■■□□□ 1.57
RAPGEF3-215ENST00000495953 ARHGAP35Q9NRY4 1499 aa24.84■■□□□ 1.57
RAPGEF3-215ENST00000495953 PTPRGP23470 1445 aa24.82■■□□□ 1.56
RAPGEF3-215ENST00000495953 P3H3Q8IVL6 736 aa24.79■■□□□ 1.56
RAPGEF3-215ENST00000495953 KIF13AQ9H1H9 1805 aa24.79■■□□□ 1.56
RAPGEF3-215ENST00000495953 FHOD3Q2V2M9 1422 aa24.77■■□□□ 1.56
RAPGEF3-215ENST00000495953 FMN1Q68DA7 1419 aa24.71■■□□□ 1.55
RAPGEF3-215ENST00000495953 UACAQ9BZF9 1416 aa24.68■■□□□ 1.54
RAPGEF3-215ENST00000495953 ABCA8O94911 1581 aa24.66■■□□□ 1.54
RAPGEF3-215ENST00000495953 MAPKBP1O60336 1514 aa24.66■■□□□ 1.54
RAPGEF3-215ENST00000495953 UHRF1BP1LA0JNW5 1464 aa24.65■■□□□ 1.54
RAPGEF3-215ENST00000495953 ABCC2Q92887 1545 aa24.63■■□□□ 1.53
RAPGEF3-215ENST00000495953 RAPGEF6Q8TEU7 1601 aa24.63■■□□□ 1.53
RAPGEF3-215ENST00000495953 DIP2BQ9P265 1576 aa24.63■■□□□ 1.53
RAPGEF3-215ENST00000495953 PLB1Q6P1J6 1458 aa24.62■■□□□ 1.53
RAPGEF3-215ENST00000495953 NPM1P06748 294 aaKnown RBP eCLIP24.6■■□□□ 1.53
RAPGEF3-215ENST00000495953 ABCC10Q5T3U5 1492 aa24.58■■□□□ 1.52
RAPGEF3-215ENST00000495953 ZCCHC11Q5TAX3 1644 aaKnown RBP24.56■■□□□ 1.52
RAPGEF3-215ENST00000495953 CASKIN1Q8WXD9 1431 aa24.55■■□□□ 1.52
RAPGEF3-215ENST00000495953 HECW1Q76N89 1606 aa24.54■■□□□ 1.52
RAPGEF3-215ENST00000495953 TSPOAP1O95153 1857 aa24.53■■□□□ 1.52
RAPGEF3-215ENST00000495953 VPS8Q8N3P4 1428 aa24.53■■□□□ 1.52
RAPGEF3-215ENST00000495953 FYCO1Q9BQS8 1478 aa24.52■■□□□ 1.52
RAPGEF3-215ENST00000495953 KDM5BQ9UGL1 1544 aa24.52■■□□□ 1.52
RAPGEF3-215ENST00000495953 PCF11O94913 1555 aaKnown RBP24.51■■□□□ 1.51
RAPGEF3-215ENST00000495953 FAM69CQ0P6D2 419 aa24.51■■□□□ 1.51
RAPGEF3-215ENST00000495953 NUP153P49790 1475 aaKnown RBP24.51■■□□□ 1.51
RAPGEF3-215ENST00000495953 ASXL2Q76L83 1435 aa24.49■■□□□ 1.51
RAPGEF3-215ENST00000495953 ATP1B4Q9UN42 357 aaPredicted RBP24.44■■□□□ 1.5
RAPGEF3-215ENST00000495953 ATP10BO94823 1461 aa24.44■■□□□ 1.5
RAPGEF3-215ENST00000495953 CCDC18Q5T9S5 1454 aa24.44■■□□□ 1.5
RAPGEF3-215ENST00000495953 EPRSP07814 1512 aaKnown RBP24.43■■□□□ 1.5
RAPGEF3-215ENST00000495953 PPRC1Q5VV67 1664 aaKnown RBP24.41■■□□□ 1.5
RAPGEF3-215ENST00000495953 LRRIQ1Q96JM4 1722 aa24.41■■□□□ 1.5
RAPGEF3-215ENST00000495953 ARID3CA6NKF2 412 aa24.38■■□□□ 1.49
RAPGEF3-215ENST00000495953 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.36■■□□□ 1.49
RAPGEF3-215ENST00000495953 HNRNPUL2Q1KMD3 747 aaKnown RBP24.36■■□□□ 1.49
RAPGEF3-215ENST00000495953 CDK13Q14004 1512 aaKnown RBP24.35■■□□□ 1.49
RAPGEF3-215ENST00000495953 GLI2P10070 1586 aa24.35■■□□□ 1.49
RAPGEF3-215ENST00000495953 CDK11AQ9UQ88 783 aaPredicted RBP24.34■■□□□ 1.49
RAPGEF3-215ENST00000495953 MAP3K1Q13233 1512 aa24.33■■□□□ 1.49
RAPGEF3-215ENST00000495953 WDR7Q9Y4E6 1490 aa24.32■■□□□ 1.48
RAPGEF3-215ENST00000495953 MAP3K4Q9Y6R4 1608 aa24.32■■□□□ 1.48
RAPGEF3-215ENST00000495953 PLEKHD1A6NEE1 506 aa24.31■■□□□ 1.48
RAPGEF3-215ENST00000495953 AEBP2Q6ZN18 517 aaPredicted RBP24.31■■□□□ 1.48
RAPGEF3-215ENST00000495953 CFAP43Q8NDM7 1665 aa24.3■■□□□ 1.48
RAPGEF3-215ENST00000495953 APLP2Q06481 763 aa24.29■■□□□ 1.48
RAPGEF3-215ENST00000495953 TIAM1Q13009 1591 aa24.28■■□□□ 1.48
RAPGEF3-215ENST00000495953 KDM6BO15054 1643 aa24.26■■□□□ 1.47
RAPGEF3-215ENST00000495953 TROQ12816 1431 aaPredicted RBP24.22■■□□□ 1.47
RAPGEF3-215ENST00000495953 MTUS2Q5JR59 1369 aa24.19■■□□□ 1.46
RAPGEF3-215ENST00000495953 KCNH8Q96L42 1107 aa24.19■■□□□ 1.46
RAPGEF3-215ENST00000495953 EHBP1L1Q8N3D4 1523 aa24.18■■□□□ 1.46
RAPGEF3-215ENST00000495953 MAGI3Q5TCQ9 1506 aa24.17■■□□□ 1.46
RAPGEF3-215ENST00000495953 LRRC9Q6ZRR7 1453 aa24.16■■□□□ 1.46
RAPGEF3-215ENST00000495953 KIF14Q15058 1648 aa24.15■■□□□ 1.46
RAPGEF3-215ENST00000495953 COL17A1Q9UMD9 1497 aaPredicted RBP24.14■■□□□ 1.46
RAPGEF3-215ENST00000495953 ABCA9Q8IUA7 1624 aa24.12■■□□□ 1.45
RAPGEF3-215ENST00000495953 SUPT6HQ7KZ85 1726 aaKnown RBP24.1■■□□□ 1.45
RAPGEF3-215ENST00000495953 CD109Q6YHK3 1445 aa24.09■■□□□ 1.45
RAPGEF3-215ENST00000495953 KANK4Q5T7N3 995 aaPredicted RBP24.08■■□□□ 1.45
RAPGEF3-215ENST00000495953 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.08■■□□□ 1.45
RAPGEF3-215ENST00000495953 TEX14Q8IWB6 1497 aa24.06■■□□□ 1.44
RAPGEF3-215ENST00000495953 TTC37Q6PGP7 1564 aa24.03■■□□□ 1.44
RAPGEF3-215ENST00000495953 MYO5CQ9NQX4 1742 aa24.01■■□□□ 1.43
RAPGEF3-215ENST00000495953 NCOA2Q15596 1464 aa24■■□□□ 1.43
RAPGEF3-215ENST00000495953 ARAP3Q8WWN8 1544 aa23.98■■□□□ 1.43
RAPGEF3-215ENST00000495953 CCNB3Q8WWL7 1395 aa23.97■■□□□ 1.43
RAPGEF3-215ENST00000495953 CDC42BPAQ5VT25 1732 aa23.96■■□□□ 1.43
RAPGEF3-215ENST00000495953 ITSN2Q9NZM3 1697 aa23.96■■□□□ 1.43
RAPGEF3-215ENST00000495953 PLCH2O75038 1416 aa23.96■■□□□ 1.43
RAPGEF3-215ENST00000495953 PREX2Q70Z35 1606 aa23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms