RNA–Protein interactions for RNA: ENST00000495756.5

ATG3-208, Transcript of autophagy related 3, humanhuman

TSL 1 (best)

Gene ATG3, Length 1,455 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-208ENST00000495756 LOC105371045A0A1W2PR82 267 aa31.73■■■□□ 2.67
ATG3-208ENST00000495756 UBTFP17480 764 aaKnown RBP31.73■■■□□ 2.67
ATG3-208ENST00000495756 CTTNBP2Q8WZ74 1663 aa31.7■■■□□ 2.66
ATG3-208ENST00000495756 KIAA0586Q9BVV6 1533 aa31.69■■■□□ 2.66
ATG3-208ENST00000495756 CLASP1Q7Z460 1538 aa31.66■■■□□ 2.66
ATG3-208ENST00000495756 IQGAP2Q13576 1575 aa31.62■■■□□ 2.65
ATG3-208ENST00000495756 TNIKQ9UKE5 1360 aa31.6■■■□□ 2.65
ATG3-208ENST00000495756 JPH4Q96JJ6 628 aa31.51■■■□□ 2.63
ATG3-208ENST00000495756 SHROOM2Q13796 1616 aa31.5■■■□□ 2.63
ATG3-208ENST00000495756 UGGT2Q9NYU1 1516 aa31.47■■■□□ 2.63
ATG3-208ENST00000495756 RANGAP1P46060 587 aaPredicted RBP31.43■■■□□ 2.62
ATG3-208ENST00000495756 PRG4Q92954 1404 aaPredicted RBP31.39■■■□□ 2.61
ATG3-208ENST00000495756 CEP162Q5TB80 1403 aa31.35■■■□□ 2.61
ATG3-208ENST00000495756 DISP1Q96F81 1524 aa31.35■■■□□ 2.61
ATG3-208ENST00000495756 SAMD9Q5K651 1589 aa31.34■■■□□ 2.61
ATG3-208ENST00000495756 EFCAB5A4FU69 1503 aa31.33■■■□□ 2.61
ATG3-208ENST00000495756 CLIP1P30622 1438 aa31.32■■■□□ 2.6
ATG3-208ENST00000495756 CARMIL2Q6F5E8 1435 aa31.32■■■□□ 2.6
ATG3-208ENST00000495756 ERCC6L2Q5T890 1561 aa31.31■■■□□ 2.6
ATG3-208ENST00000495756 KIAA0556O60303 1618 aa31.3■■■□□ 2.6
ATG3-208ENST00000495756 ARHGAP35Q9NRY4 1499 aa31.29■■■□□ 2.6
ATG3-208ENST00000495756 P3H3Q8IVL6 736 aa31.24■■■□□ 2.59
ATG3-208ENST00000495756 ARHGEF11O15085 1522 aa31.24■■■□□ 2.59
ATG3-208ENST00000495756 FHOD3Q2V2M9 1422 aa31.18■■■□□ 2.58
ATG3-208ENST00000495756 RIMBP3CA6NJZ7 1639 aa31.16■■■□□ 2.58
ATG3-208ENST00000495756 RIMBP3BA6NNM3 1639 aa31.16■■■□□ 2.58
ATG3-208ENST00000495756 RIMBP3Q9UFD9 1639 aa31.16■■■□□ 2.58
ATG3-208ENST00000495756 ARAP1Q96P48 1450 aa31.15■■■□□ 2.58
ATG3-208ENST00000495756 PTPRGP23470 1445 aa31.1■■■□□ 2.57
ATG3-208ENST00000495756 TTBK1Q5TCY1 1321 aaPredicted RBP31.08■■■□□ 2.57
ATG3-208ENST00000495756 FMN1Q68DA7 1419 aa31.02■■■□□ 2.56
ATG3-208ENST00000495756 PLB1Q6P1J6 1458 aa30.94■■■□□ 2.54
ATG3-208ENST00000495756 VPS8Q8N3P4 1428 aa30.93■■■□□ 2.54
ATG3-208ENST00000495756 ABCA8O94911 1581 aa30.92■■■□□ 2.54
ATG3-208ENST00000495756 CYB5RLQ6IPT4 315 aa30.92■■■□□ 2.54
ATG3-208ENST00000495756 UACAQ9BZF9 1416 aa30.91■■■□□ 2.54
ATG3-208ENST00000495756 RAPGEF6Q8TEU7 1601 aa30.89■■■□□ 2.54
ATG3-208ENST00000495756 PCF11O94913 1555 aaKnown RBP30.87■■■□□ 2.53
ATG3-208ENST00000495756 CASKIN1Q8WXD9 1431 aa30.87■■■□□ 2.53
ATG3-208ENST00000495756 ABCC2Q92887 1545 aa30.84■■■□□ 2.53
ATG3-208ENST00000495756 UHRF1BP1LA0JNW5 1464 aa30.84■■■□□ 2.53
ATG3-208ENST00000495756 FYCO1Q9BQS8 1478 aa30.83■■■□□ 2.53
ATG3-208ENST00000495756 ADCY10Q96PN6 1610 aa30.82■■■□□ 2.52
ATG3-208ENST00000495756 NUP153P49790 1475 aaKnown RBP30.79■■■□□ 2.52
ATG3-208ENST00000495756 HECW1Q76N89 1606 aa30.79■■■□□ 2.52
ATG3-208ENST00000495756 ATP1B4Q9UN42 357 aaPredicted RBP30.78■■■□□ 2.52
ATG3-208ENST00000495756 ARID3CA6NKF2 412 aa30.7■■■□□ 2.51
ATG3-208ENST00000495756 EPRSP07814 1512 aaKnown RBP30.7■■■□□ 2.51
ATG3-208ENST00000495756 LRRIQ1Q96JM4 1722 aa30.7■■■□□ 2.51
ATG3-208ENST00000495756 KDM5BQ9UGL1 1544 aa30.69■■■□□ 2.5
ATG3-208ENST00000495756 ATP10BO94823 1461 aa30.68■■■□□ 2.5
ATG3-208ENST00000495756 CCDC18Q5T9S5 1454 aa30.66■■■□□ 2.5
ATG3-208ENST00000495756 CDK13Q14004 1512 aaKnown RBP30.64■■■□□ 2.5
ATG3-208ENST00000495756 ZCCHC11Q5TAX3 1644 aaKnown RBP30.64■■■□□ 2.5
ATG3-208ENST00000495756 NPM1P06748 294 aaKnown RBP eCLIP30.63■■■□□ 2.49
ATG3-208ENST00000495756 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.6■■■□□ 2.49
ATG3-208ENST00000495756 HNRNPUL2Q1KMD3 747 aaKnown RBP30.6■■■□□ 2.49
ATG3-208ENST00000495756 APLP2Q06481 763 aa30.57■■■□□ 2.48
ATG3-208ENST00000495756 TIAM1Q13009 1591 aa30.57■■■□□ 2.48
ATG3-208ENST00000495756 CFAP43Q8NDM7 1665 aa30.56■■■□□ 2.48
ATG3-208ENST00000495756 MAP3K1Q13233 1512 aa30.56■■■□□ 2.48
ATG3-208ENST00000495756 CDK11AQ9UQ88 783 aaPredicted RBP30.5■■■□□ 2.47
ATG3-208ENST00000495756 MAPKBP1O60336 1514 aa30.48■■■□□ 2.47
ATG3-208ENST00000495756 ASXL2Q76L83 1435 aa30.46■■■□□ 2.47
ATG3-208ENST00000495756 PLEKHD1A6NEE1 506 aa30.46■■■□□ 2.47
ATG3-208ENST00000495756 MAGI3Q5TCQ9 1506 aa30.45■■■□□ 2.47
ATG3-208ENST00000495756 LRRC9Q6ZRR7 1453 aa30.43■■■□□ 2.46
ATG3-208ENST00000495756 WDR7Q9Y4E6 1490 aa30.43■■■□□ 2.46
ATG3-208ENST00000495756 TROQ12816 1431 aaPredicted RBP30.41■■■□□ 2.46
ATG3-208ENST00000495756 MTUS2Q5JR59 1369 aa30.41■■■□□ 2.46
ATG3-208ENST00000495756 KANK4Q5T7N3 995 aaPredicted RBP30.41■■■□□ 2.46
ATG3-208ENST00000495756 EHBP1L1Q8N3D4 1523 aa30.38■■■□□ 2.45
ATG3-208ENST00000495756 KCNH8Q96L42 1107 aa30.32■■■□□ 2.44
ATG3-208ENST00000495756 PPARGC1BQ86YN6 1023 aaKnown RBP30.3■■■□□ 2.44
ATG3-208ENST00000495756 KIF14Q15058 1648 aa30.3■■■□□ 2.44
ATG3-208ENST00000495756 SUPT6HQ7KZ85 1726 aaKnown RBP30.26■■■□□ 2.43
ATG3-208ENST00000495756 ABCC10Q5T3U5 1492 aa30.25■■■□□ 2.43
ATG3-208ENST00000495756 DIP2BQ9P265 1576 aa30.22■■■□□ 2.43
ATG3-208ENST00000495756 NCOA2Q15596 1464 aa30.22■■■□□ 2.43
ATG3-208ENST00000495756 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.21■■■□□ 2.433e-6■■■■□ 23
ATG3-208ENST00000495756 ABCA9Q8IUA7 1624 aa30.19■■■□□ 2.42
ATG3-208ENST00000495756 GLI2P10070 1586 aa30.19■■■□□ 2.42
ATG3-208ENST00000495756 TTC37Q6PGP7 1564 aa30.18■■■□□ 2.42
ATG3-208ENST00000495756 FAM69CQ0P6D2 419 aa30.16■■■□□ 2.42
ATG3-208ENST00000495756 KIF13AQ9H1H9 1805 aa30.14■■■□□ 2.42
ATG3-208ENST00000495756 CCNB3Q8WWL7 1395 aa30.11■■■□□ 2.41
ATG3-208ENST00000495756 MAP3K4Q9Y6R4 1608 aa30.09■■■□□ 2.41
ATG3-208ENST00000495756 PHLDB1Q86UU1 1377 aa30.08■■■□□ 2.41
ATG3-208ENST00000495756 GPATCH8Q9UKJ3 1502 aaKnown RBP30.08■■■□□ 2.41
ATG3-208ENST00000495756 MYO5CQ9NQX4 1742 aa30.07■■■□□ 2.4
ATG3-208ENST00000495756 CD109Q6YHK3 1445 aa30.07■■■□□ 2.4
ATG3-208ENST00000495756 CDC42BPAQ5VT25 1732 aa30.07■■■□□ 2.4
ATG3-208ENST00000495756 TRHP20396 242 aaPredicted RBP30.05■■■□□ 2.4
ATG3-208ENST00000495756 PLCH2O75038 1416 aa30.04■■■□□ 2.4
ATG3-208ENST00000495756 MYOM3Q5VTT5 1437 aa30.04■■■□□ 2.4
ATG3-208ENST00000495756 PREX2Q70Z35 1606 aa30.03■■■□□ 2.4
ATG3-208ENST00000495756 ITSN2Q9NZM3 1697 aa30.03■■■□□ 2.4
ATG3-208ENST00000495756 CDC42BPBQ9Y5S2 1711 aa30■■■□□ 2.39
ATG3-208ENST00000495756 ARAP3Q8WWN8 1544 aa30■■■□□ 2.39
ATG3-208ENST00000495756 CFDP1Q9UEE9 299 aaPredicted RBP29.98■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms