RNA–Protein interactions for RNA: ENST00000495546.1

C2orf88-209, Transcript of chromosome 2 open reading frame 88, humanhuman

TSL 4

Gene C2orf88, Length 387 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf88-209ENST00000495546 FAM9AQ8IZU1 332 aaPredicted RBP25.7■■□□□ 1.7
C2orf88-209ENST00000495546 RIMBP3CA6NJZ7 1639 aa25.69■■□□□ 1.7
C2orf88-209ENST00000495546 RIMBP3BA6NNM3 1639 aa25.69■■□□□ 1.7
C2orf88-209ENST00000495546 RIMBP3Q9UFD9 1639 aa25.69■■□□□ 1.7
C2orf88-209ENST00000495546 KIF21BO75037 1637 aa25.62■■□□□ 1.69
C2orf88-209ENST00000495546 JPH4Q96JJ6 628 aa25.61■■□□□ 1.69
C2orf88-209ENST00000495546 IQGAP2Q13576 1575 aa25.58■■□□□ 1.69
C2orf88-209ENST00000495546 ERCC6L2Q5T890 1561 aa25.57■■□□□ 1.68
C2orf88-209ENST00000495546 PRG4Q92954 1404 aaPredicted RBP25.55■■□□□ 1.68
C2orf88-209ENST00000495546 ARAP1Q96P48 1450 aa25.55■■□□□ 1.68
C2orf88-209ENST00000495546 CTTNBP2Q8WZ74 1663 aa25.54■■□□□ 1.68
C2orf88-209ENST00000495546 UGGT2Q9NYU1 1516 aa25.49■■□□□ 1.67
C2orf88-209ENST00000495546 GOLGA3Q08378 1498 aa25.46■■□□□ 1.67
C2orf88-209ENST00000495546 DISP1Q96F81 1524 aa25.42■■□□□ 1.66
C2orf88-209ENST00000495546 CYB5RLQ6IPT4 315 aa25.41■■□□□ 1.66
C2orf88-209ENST00000495546 CARMIL2Q6F5E8 1435 aa25.38■■□□□ 1.65
C2orf88-209ENST00000495546 KIAA0556O60303 1618 aa25.35■■□□□ 1.65
C2orf88-209ENST00000495546 TNIKQ9UKE5 1360 aa25.31■■□□□ 1.64
C2orf88-209ENST00000495546 EHMT2Q96KQ7 1210 aa25.3■■□□□ 1.64
C2orf88-209ENST00000495546 UBTFP17480 764 aaKnown RBP25.29■■□□□ 1.64
C2orf88-209ENST00000495546 SAMD9Q5K651 1589 aa25.28■■□□□ 1.64
C2orf88-209ENST00000495546 PTPRGP23470 1445 aa25.26■■□□□ 1.63
C2orf88-209ENST00000495546 EFCAB5A4FU69 1503 aa25.19■■□□□ 1.62
C2orf88-209ENST00000495546 ADCY10Q96PN6 1610 aa25.15■■□□□ 1.62
C2orf88-209ENST00000495546 RANGAP1P46060 587 aaPredicted RBP25.13■■□□□ 1.61
C2orf88-209ENST00000495546 UHRF1BP1LA0JNW5 1464 aa25.13■■□□□ 1.61
C2orf88-209ENST00000495546 UACAQ9BZF9 1416 aa25.12■■□□□ 1.61
C2orf88-209ENST00000495546 P3H3Q8IVL6 736 aa25.12■■□□□ 1.61
C2orf88-209ENST00000495546 TTBK1Q5TCY1 1321 aaPredicted RBP25.12■■□□□ 1.61
C2orf88-209ENST00000495546 ARHGAP35Q9NRY4 1499 aa25.11■■□□□ 1.61
C2orf88-209ENST00000495546 FHOD3Q2V2M9 1422 aa25.1■■□□□ 1.61
C2orf88-209ENST00000495546 ABCC2Q92887 1545 aa25.09■■□□□ 1.61
C2orf88-209ENST00000495546 ABCA8O94911 1581 aa25.08■■□□□ 1.61
C2orf88-209ENST00000495546 PLB1Q6P1J6 1458 aa25.07■■□□□ 1.6
C2orf88-209ENST00000495546 LOC105371045A0A1W2PR82 267 aa25.06■■□□□ 1.6
C2orf88-209ENST00000495546 CLIP1P30622 1438 aa25■■□□□ 1.59
C2orf88-209ENST00000495546 KDM5BQ9UGL1 1544 aa25■■□□□ 1.59
C2orf88-209ENST00000495546 MAPKBP1O60336 1514 aa24.97■■□□□ 1.59
C2orf88-209ENST00000495546 CEP162Q5TB80 1403 aa24.95■■□□□ 1.59
C2orf88-209ENST00000495546 RAPGEF6Q8TEU7 1601 aa24.95■■□□□ 1.58
C2orf88-209ENST00000495546 NPM1P06748 294 aaKnown RBP eCLIP24.95■■□□□ 1.58
C2orf88-209ENST00000495546 FMN1Q68DA7 1419 aa24.94■■□□□ 1.58
C2orf88-209ENST00000495546 ZCCHC11Q5TAX3 1644 aaKnown RBP24.91■■□□□ 1.58
C2orf88-209ENST00000495546 NUP153P49790 1475 aaKnown RBP24.89■■□□□ 1.58
C2orf88-209ENST00000495546 ATP10BO94823 1461 aa24.86■■□□□ 1.57
C2orf88-209ENST00000495546 ASXL2Q76L83 1435 aa24.84■■□□□ 1.57
C2orf88-209ENST00000495546 ABCC10Q5T3U5 1492 aa24.81■■□□□ 1.56
C2orf88-209ENST00000495546 HECW1Q76N89 1606 aa24.79■■□□□ 1.56
C2orf88-209ENST00000495546 CASKIN1Q8WXD9 1431 aa24.78■■□□□ 1.56
C2orf88-209ENST00000495546 PCF11O94913 1555 aaKnown RBP24.78■■□□□ 1.56
C2orf88-209ENST00000495546 DIP2BQ9P265 1576 aa24.78■■□□□ 1.56
C2orf88-209ENST00000495546 ARID3CA6NKF2 412 aa24.76■■□□□ 1.55
C2orf88-209ENST00000495546 TRHP20396 242 aaPredicted RBP24.76■■□□□ 1.55
C2orf88-209ENST00000495546 WDR7Q9Y4E6 1490 aa24.76■■□□□ 1.55
C2orf88-209ENST00000495546 KIF13AQ9H1H9 1805 aa24.75■■□□□ 1.55
C2orf88-209ENST00000495546 EPRSP07814 1512 aaKnown RBP24.74■■□□□ 1.55
C2orf88-209ENST00000495546 FYCO1Q9BQS8 1478 aa24.73■■□□□ 1.55
C2orf88-209ENST00000495546 CDK13Q14004 1512 aaKnown RBP24.71■■□□□ 1.55
C2orf88-209ENST00000495546 GLI2P10070 1586 aa24.71■■□□□ 1.55
C2orf88-209ENST00000495546 FAM69CQ0P6D2 419 aa24.69■■□□□ 1.54
C2orf88-209ENST00000495546 LRRIQ1Q96JM4 1722 aa24.69■■□□□ 1.54
C2orf88-209ENST00000495546 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.65■■□□□ 1.54
C2orf88-209ENST00000495546 HNRNPUL2Q1KMD3 747 aaKnown RBP24.65■■□□□ 1.54
C2orf88-209ENST00000495546 VPS8Q8N3P4 1428 aa24.65■■□□□ 1.54
C2orf88-209ENST00000495546 ATP1B4Q9UN42 357 aaPredicted RBP24.65■■□□□ 1.54
C2orf88-209ENST00000495546 CCDC18Q5T9S5 1454 aa24.64■■□□□ 1.54
C2orf88-209ENST00000495546 PLEKHD1A6NEE1 506 aa24.6■■□□□ 1.53
C2orf88-209ENST00000495546 KCNH8Q96L42 1107 aa24.58■■□□□ 1.53
C2orf88-209ENST00000495546 MAP3K4Q9Y6R4 1608 aa24.57■■□□□ 1.52
C2orf88-209ENST00000495546 CDK11AQ9UQ88 783 aaPredicted RBP24.55■■□□□ 1.52
C2orf88-209ENST00000495546 ABCA9Q8IUA7 1624 aa24.54■■□□□ 1.52
C2orf88-209ENST00000495546 TROQ12816 1431 aaPredicted RBP24.53■■□□□ 1.52
C2orf88-209ENST00000495546 MAGI3Q5TCQ9 1506 aa24.53■■□□□ 1.52
C2orf88-209ENST00000495546 CFAP43Q8NDM7 1665 aa24.53■■□□□ 1.52
C2orf88-209ENST00000495546 PPRC1Q5VV67 1664 aaKnown RBP24.52■■□□□ 1.52
C2orf88-209ENST00000495546 CD109Q6YHK3 1445 aa24.49■■□□□ 1.51
C2orf88-209ENST00000495546 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.48■■□□□ 1.51
C2orf88-209ENST00000495546 TSPOAP1O95153 1857 aa24.46■■□□□ 1.51
C2orf88-209ENST00000495546 KIF14Q15058 1648 aa24.45■■□□□ 1.5
C2orf88-209ENST00000495546 TIAM1Q13009 1591 aa24.44■■□□□ 1.5
C2orf88-209ENST00000495546 TTC37Q6PGP7 1564 aa24.44■■□□□ 1.5
C2orf88-209ENST00000495546 MAP3K1Q13233 1512 aa24.44■■□□□ 1.5
C2orf88-209ENST00000495546 TEX14Q8IWB6 1497 aa24.42■■□□□ 1.5
C2orf88-209ENST00000495546 EHBP1L1Q8N3D4 1523 aa24.39■■□□□ 1.49
C2orf88-209ENST00000495546 MTUS2Q5JR59 1369 aa24.38■■□□□ 1.49
C2orf88-209ENST00000495546 PLCH2O75038 1416 aa24.35■■□□□ 1.49
C2orf88-209ENST00000495546 ARAP3Q8WWN8 1544 aa24.34■■□□□ 1.49
C2orf88-209ENST00000495546 LRRC9Q6ZRR7 1453 aa24.33■■□□□ 1.49
C2orf88-209ENST00000495546 NEO1Q92859 1461 aa24.31■■□□□ 1.48
C2orf88-209ENST00000495546 MYO5CQ9NQX4 1742 aa24.3■■□□□ 1.48
C2orf88-209ENST00000495546 PHLDB1Q86UU1 1377 aa24.29■■□□□ 1.48
C2orf88-209ENST00000495546 COL17A1Q9UMD9 1497 aaPredicted RBP24.29■■□□□ 1.48
C2orf88-209ENST00000495546 KANK4Q5T7N3 995 aaPredicted RBP24.28■■□□□ 1.48
C2orf88-209ENST00000495546 KDM6BO15054 1643 aa24.28■■□□□ 1.48
C2orf88-209ENST00000495546 FANCAO15360 1455 aa24.27■■□□□ 1.48
C2orf88-209ENST00000495546 PREX2Q70Z35 1606 aa24.26■■□□□ 1.47
C2orf88-209ENST00000495546 GPATCH8Q9UKJ3 1502 aaKnown RBP24.25■■□□□ 1.47
C2orf88-209ENST00000495546 CFAP74Q9C0B2 1584 aa24.25■■□□□ 1.47
C2orf88-209ENST00000495546 CDC42BPAQ5VT25 1732 aa24.24■■□□□ 1.47
C2orf88-209ENST00000495546 APLP2Q06481 763 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms