RNA–Protein interactions for RNA: ENST00000494569.5

ZIC4-216, Transcript of Zic family member 4, humanhuman

TSL 2

Gene ZIC4, Length 3,317 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4-216ENST00000494569 CYB5RLQ6IPT4 315 aa17.32■□□□□ 0.36
ZIC4-216ENST00000494569 AQRO60306 1485 aaKnown RBP eCLIP17.32■□□□□ 0.36
ZIC4-216ENST00000494569 CLASP1Q7Z460 1538 aa17.3■□□□□ 0.36
ZIC4-216ENST00000494569 CARMIL1Q5VZK9 1371 aa17.26■□□□□ 0.35
ZIC4-216ENST00000494569 PBRM1Q86U86 1689 aa17.26■□□□□ 0.35
ZIC4-216ENST00000494569 ARHGAP35Q9NRY4 1499 aa17.26■□□□□ 0.35
ZIC4-216ENST00000494569 CFAP43Q8NDM7 1665 aa17.23■□□□□ 0.35
ZIC4-216ENST00000494569 MAGI1Q96QZ7 1491 aaPredicted RBP17.22■□□□□ 0.35
ZIC4-216ENST00000494569 LRRIQ1Q96JM4 1722 aa17.21■□□□□ 0.35
ZIC4-216ENST00000494569 TRHP20396 242 aaPredicted RBP17.21■□□□□ 0.35
ZIC4-216ENST00000494569 MAP3K1Q13233 1512 aa17.21■□□□□ 0.35
ZIC4-216ENST00000494569 SAMD9Q5K651 1589 aa17.2■□□□□ 0.34
ZIC4-216ENST00000494569 SNAPC4Q5SXM2 1469 aa17.19■□□□□ 0.34
ZIC4-216ENST00000494569 PPARGC1BQ86YN6 1023 aaKnown RBP17.17■□□□□ 0.34
ZIC4-216ENST00000494569 GAPVD1Q14C86 1478 aa17.17■□□□□ 0.34
ZIC4-216ENST00000494569 GRIN2BQ13224 1484 aa17.15■□□□□ 0.34
ZIC4-216ENST00000494569 FBLN2P98095 1184 aa17.14■□□□□ 0.34
ZIC4-216ENST00000494569 SYNJ2O15056 1496 aa17.14■□□□□ 0.33
ZIC4-216ENST00000494569 TDRD9Q8NDG6 1382 aaKnown RBP17.13■□□□□ 0.33
ZIC4-216ENST00000494569 EFCAB5A4FU69 1503 aa17.11■□□□□ 0.33
ZIC4-216ENST00000494569 ADAMTS12P58397 1594 aa17.1■□□□□ 0.33
ZIC4-216ENST00000494569 TIAM1Q13009 1591 aa17.08■□□□□ 0.33
ZIC4-216ENST00000494569 CHMP7Q8WUX9 453 aaPredicted RBP17.07■□□□□ 0.32
ZIC4-216ENST00000494569 PCF11O94913 1555 aaKnown RBP17.06■□□□□ 0.32
ZIC4-216ENST00000494569 RRBP1Q9P2E9 1410 aaKnown RBP17.02■□□□□ 0.32
ZIC4-216ENST00000494569 FHAD1B1AJZ9 1412 aa17.01■□□□□ 0.31
ZIC4-216ENST00000494569 AEBP2Q6ZN18 517 aaPredicted RBP16.99■□□□□ 0.31
ZIC4-216ENST00000494569 FYCO1Q9BQS8 1478 aa16.94■□□□□ 0.3
ZIC4-216ENST00000494569 SHROOM2Q13796 1616 aa16.93■□□□□ 0.3
ZIC4-216ENST00000494569 GRIN2AQ12879 1464 aa16.92■□□□□ 0.3
ZIC4-216ENST00000494569 NUP160Q12769 1436 aa16.91■□□□□ 0.3
ZIC4-216ENST00000494569 CASKIN1Q8WXD9 1431 aa16.91■□□□□ 0.3
ZIC4-216ENST00000494569 RANGAP1P46060 587 aaPredicted RBP16.91■□□□□ 0.3
ZIC4-216ENST00000494569 IQGAP2Q13576 1575 aa16.9■□□□□ 0.3
ZIC4-216ENST00000494569 KANK4Q5T7N3 995 aaPredicted RBP16.9■□□□□ 0.3
ZIC4-216ENST00000494569 FHOD3Q2V2M9 1422 aa16.89■□□□□ 0.29
ZIC4-216ENST00000494569 CEP170Q5SW79 1584 aa16.89■□□□□ 0.29
ZIC4-216ENST00000494569 LRRC9Q6ZRR7 1453 aa16.89■□□□□ 0.29
ZIC4-216ENST00000494569 UGGT2Q9NYU1 1516 aa16.88■□□□□ 0.29
ZIC4-216ENST00000494569 ERCC6L2Q5T890 1561 aa16.87■□□□□ 0.29
ZIC4-216ENST00000494569 ZEB1P37275 1124 aaPredicted RBP16.86■□□□□ 0.29
ZIC4-216ENST00000494569 FMN1Q68DA7 1419 aa16.84■□□□□ 0.29
ZIC4-216ENST00000494569 KIF13AQ9H1H9 1805 aa16.83■□□□□ 0.28
ZIC4-216ENST00000494569 APLP2Q06481 763 aa16.82■□□□□ 0.28
ZIC4-216ENST00000494569 TTBK1Q5TCY1 1321 aaPredicted RBP16.81■□□□□ 0.28
ZIC4-216ENST00000494569 KIAA0586Q9BVV6 1533 aa16.81■□□□□ 0.28
ZIC4-216ENST00000494569 MAGI3Q5TCQ9 1506 aa16.78■□□□□ 0.28
ZIC4-216ENST00000494569 DISP1Q96F81 1524 aa16.77■□□□□ 0.28
ZIC4-216ENST00000494569 KIAA0556O60303 1618 aa16.77■□□□□ 0.28
ZIC4-216ENST00000494569 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.73■□□□□ 0.27
ZIC4-216ENST00000494569 HECW1Q76N89 1606 aa16.72■□□□□ 0.27
ZIC4-216ENST00000494569 MAPKBP1O60336 1514 aa16.71■□□□□ 0.27
ZIC4-216ENST00000494569 P3H3Q8IVL6 736 aa16.71■□□□□ 0.27
ZIC4-216ENST00000494569 PHLDB1Q86UU1 1377 aa16.7■□□□□ 0.26
ZIC4-216ENST00000494569 CCNB3Q8WWL7 1395 aa16.7■□□□□ 0.26
ZIC4-216ENST00000494569 ABCC10Q5T3U5 1492 aa16.69■□□□□ 0.26
ZIC4-216ENST00000494569 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.69■□□□□ 0.26
ZIC4-216ENST00000494569 CCDC18Q5T9S5 1454 aa16.69■□□□□ 0.26
ZIC4-216ENST00000494569 PELP1Q8IZL8 1130 aaKnown RBP16.68■□□□□ 0.26
ZIC4-216ENST00000494569 SUPT6HQ7KZ85 1726 aaKnown RBP16.68■□□□□ 0.26
ZIC4-216ENST00000494569 PRKCSHP14314 528 aaPredicted RBP16.68■□□□□ 0.26
ZIC4-216ENST00000494569 PRG4Q92954 1404 aaPredicted RBP16.68■□□□□ 0.26
ZIC4-216ENST00000494569 EHBP1L1Q8N3D4 1523 aa16.67■□□□□ 0.26
ZIC4-216ENST00000494569 MYT1Q01538 1121 aa16.67■□□□□ 0.26
ZIC4-216ENST00000494569 ADCY10Q96PN6 1610 aa16.66■□□□□ 0.26
ZIC4-216ENST00000494569 DIP2BQ9P265 1576 aa16.65■□□□□ 0.26
ZIC4-216ENST00000494569 TCOF1Q13428 1488 aaKnown RBP16.63■□□□□ 0.25
ZIC4-216ENST00000494569 EPRSP07814 1512 aaKnown RBP16.63■□□□□ 0.25
ZIC4-216ENST00000494569 DHX57Q6P158 1386 aaKnown RBP16.63■□□□□ 0.25
ZIC4-216ENST00000494569 GCC2Q8IWJ2 1684 aa16.62■□□□□ 0.25
ZIC4-216ENST00000494569 RAPGEF6Q8TEU7 1601 aa16.62■□□□□ 0.25
ZIC4-216ENST00000494569 JPH4Q96JJ6 628 aa16.61■□□□□ 0.25
ZIC4-216ENST00000494569 CCER1Q8TC90 406 aaPredicted RBP16.59■□□□□ 0.25
ZIC4-216ENST00000494569 HNRNPUL2Q1KMD3 747 aaKnown RBP16.59■□□□□ 0.25
ZIC4-216ENST00000494569 NUP153P49790 1475 aaKnown RBP16.58■□□□□ 0.24
ZIC4-216ENST00000494569 NCOA2Q15596 1464 aa16.58■□□□□ 0.24
ZIC4-216ENST00000494569 PTPN23Q9H3S7 1636 aa16.56■□□□□ 0.24
ZIC4-216ENST00000494569 FGD6Q6ZV73 1430 aa16.56■□□□□ 0.24
ZIC4-216ENST00000494569 KDM6BO15054 1643 aa16.56■□□□□ 0.24
ZIC4-216ENST00000494569 CLSPNQ9HAW4 1339 aa16.55■□□□□ 0.24
ZIC4-216ENST00000494569 CDK13Q14004 1512 aaKnown RBP16.55■□□□□ 0.24
ZIC4-216ENST00000494569 FAM69CQ0P6D2 419 aa16.54■□□□□ 0.24
ZIC4-216ENST00000494569 ABCA8O94911 1581 aa16.54■□□□□ 0.24
ZIC4-216ENST00000494569 NPM1P06748 294 aaKnown RBP eCLIP16.54■□□□□ 0.24
ZIC4-216ENST00000494569 MYOM3Q5VTT5 1437 aa16.53■□□□□ 0.24
ZIC4-216ENST00000494569 CROCC2H7BZ55 1655 aa16.52■□□□□ 0.24
ZIC4-216ENST00000494569 PTPRKQ15262 1439 aa16.51■□□□□ 0.23
ZIC4-216ENST00000494569 MTUS2Q5JR59 1369 aa16.5■□□□□ 0.23
ZIC4-216ENST00000494569 GLI2P10070 1586 aa16.46■□□□□ 0.23
ZIC4-216ENST00000494569 CARMIL2Q6F5E8 1435 aa16.46■□□□□ 0.23
ZIC4-216ENST00000494569 KDM4FA0A1W2PPD8 638 aa16.46■□□□□ 0.23
ZIC4-216ENST00000494569 DNMT1P26358 1616 aaKnown RBP16.45■□□□□ 0.22
ZIC4-216ENST00000494569 DENND4BO75064 1496 aaPredicted RBP16.45■□□□□ 0.22
ZIC4-216ENST00000494569 PLB1Q6P1J6 1458 aa16.45■□□□□ 0.22
ZIC4-216ENST00000494569 MIA2Q96PC5 1412 aa16.44■□□□□ 0.22
ZIC4-216ENST00000494569 SETD5Q9C0A6 1442 aa16.44■□□□□ 0.22
ZIC4-216ENST00000494569 AKNAQ7Z591 1439 aa16.44■□□□□ 0.22
ZIC4-216ENST00000494569 KDM5BQ9UGL1 1544 aa16.44■□□□□ 0.22
ZIC4-216ENST00000494569 RAB3GAP2Q9H2M9 1393 aa16.43■□□□□ 0.22
ZIC4-216ENST00000494569 ATP1B4Q9UN42 357 aaPredicted RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms