RNA–Protein interactions for RNA: ENST00000494557.1

RAF1-212, Transcript of Raf-1 proto-oncogene, serine/threonine kinase, humanhuman

TSL 1 (best)

Gene RAF1, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAF1-212ENST00000494557 CASKIN1Q8WXD9 1431 aa13.19□□□□□ -0.3
RAF1-212ENST00000494557 LRRC9Q6ZRR7 1453 aa13.19□□□□□ -0.3
RAF1-212ENST00000494557 PDS5BQ9NTI5 1447 aa13.18□□□□□ -0.3
RAF1-212ENST00000494557 CARMIL1Q5VZK9 1371 aa13.18□□□□□ -0.3
RAF1-212ENST00000494557 GRIN2BQ13224 1484 aa13.17□□□□□ -0.3
RAF1-212ENST00000494557 FHAD1B1AJZ9 1412 aa13.17□□□□□ -0.3
RAF1-212ENST00000494557 UGGT2Q9NYU1 1516 aa13.16□□□□□ -0.3
RAF1-212ENST00000494557 PPARGC1BQ86YN6 1023 aaKnown RBP13.15□□□□□ -0.3
RAF1-212ENST00000494557 GCC2Q8IWJ2 1684 aa13.14□□□□□ -0.31
RAF1-212ENST00000494557 MRC2Q9UBG0 1479 aa13.14□□□□□ -0.31
RAF1-212ENST00000494557 RAD54L2Q9Y4B4 1467 aa13.14□□□□□ -0.31
RAF1-212ENST00000494557 ADCY10Q96PN6 1610 aa13.12□□□□□ -0.31
RAF1-212ENST00000494557 GAPVD1Q14C86 1478 aa13.1□□□□□ -0.31
RAF1-212ENST00000494557 SUPT6HQ7KZ85 1726 aaKnown RBP13.09□□□□□ -0.31
RAF1-212ENST00000494557 IQGAP2Q13576 1575 aa13.08□□□□□ -0.32
RAF1-212ENST00000494557 MAPKBP1O60336 1514 aa13.08□□□□□ -0.32
RAF1-212ENST00000494557 EHBP1L1Q8N3D4 1523 aa13.08□□□□□ -0.32
RAF1-212ENST00000494557 TCOF1Q13428 1488 aaKnown RBP13.08□□□□□ -0.32
RAF1-212ENST00000494557 HECW1Q76N89 1606 aa13.07□□□□□ -0.32
RAF1-212ENST00000494557 UBTFP17480 764 aaKnown RBP13.06□□□□□ -0.32
RAF1-212ENST00000494557 EIF4G3O43432 1585 aaKnown RBP13.06□□□□□ -0.32
RAF1-212ENST00000494557 IFT140Q96RY7 1462 aa13.06□□□□□ -0.32
RAF1-212ENST00000494557 FMN1Q68DA7 1419 aa13.05□□□□□ -0.32
RAF1-212ENST00000494557 CCDC18Q5T9S5 1454 aa13.04□□□□□ -0.32
RAF1-212ENST00000494557 DHX57Q6P158 1386 aaKnown RBP13.03□□□□□ -0.32
RAF1-212ENST00000494557 KIAA0556O60303 1618 aa13.03□□□□□ -0.32
RAF1-212ENST00000494557 AKNAQ7Z591 1439 aa13.03□□□□□ -0.32
RAF1-212ENST00000494557 CROCC2H7BZ55 1655 aa13.02□□□□□ -0.33
RAF1-212ENST00000494557 CCNB3Q8WWL7 1395 aa13.01□□□□□ -0.33
RAF1-212ENST00000494557 MAGI3Q5TCQ9 1506 aa13□□□□□ -0.33
RAF1-212ENST00000494557 PTPN23Q9H3S7 1636 aa12.97□□□□□ -0.33
RAF1-212ENST00000494557 MAGI1Q96QZ7 1491 aaPredicted RBP12.96□□□□□ -0.33
RAF1-212ENST00000494557 SHROOM2Q13796 1616 aa12.95□□□□□ -0.34
RAF1-212ENST00000494557 DISP1Q96F81 1524 aa12.94□□□□□ -0.34
RAF1-212ENST00000494557 POLR1AO95602 1720 aaPredicted RBP12.94□□□□□ -0.34
RAF1-212ENST00000494557 ADGBQ8N7X0 1667 aa12.94□□□□□ -0.34
RAF1-212ENST00000494557 PHLDB1Q86UU1 1377 aa12.94□□□□□ -0.34
RAF1-212ENST00000494557 KANK4Q5T7N3 995 aaPredicted RBP12.94□□□□□ -0.34
RAF1-212ENST00000494557 KDM5BQ9UGL1 1544 aa12.93□□□□□ -0.34
RAF1-212ENST00000494557 RAPGEF6Q8TEU7 1601 aa12.93□□□□□ -0.34
RAF1-212ENST00000494557 ITSN2Q9NZM3 1697 aa12.92□□□□□ -0.34
RAF1-212ENST00000494557 CEP170Q5SW79 1584 aa12.92□□□□□ -0.34
RAF1-212ENST00000494557 KIAA0586Q9BVV6 1533 aa12.91□□□□□ -0.34
RAF1-212ENST00000494557 DNMT1P26358 1616 aaKnown RBP12.91□□□□□ -0.34
RAF1-212ENST00000494557 SLC24A1O60721 1099 aa12.9□□□□□ -0.34
RAF1-212ENST00000494557 FGD6Q6ZV73 1430 aa12.9□□□□□ -0.34
RAF1-212ENST00000494557 FHOD3Q2V2M9 1422 aa12.89□□□□□ -0.35
RAF1-212ENST00000494557 NUP160Q12769 1436 aa12.89□□□□□ -0.35
RAF1-212ENST00000494557 HFM1A2PYH4 1435 aa12.89□□□□□ -0.35
RAF1-212ENST00000494557 GRIN2AQ12879 1464 aa12.88□□□□□ -0.35
RAF1-212ENST00000494557 MIA2Q96PC5 1412 aa12.87□□□□□ -0.35
RAF1-212ENST00000494557 EPRSP07814 1512 aaKnown RBP12.87□□□□□ -0.35
RAF1-212ENST00000494557 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.86□□□□□ -0.35
RAF1-212ENST00000494557 ABCA8O94911 1581 aa12.86□□□□□ -0.35
RAF1-212ENST00000494557 MYOM3Q5VTT5 1437 aa12.86□□□□□ -0.35
RAF1-212ENST00000494557 NCOA2Q15596 1464 aa12.85□□□□□ -0.35
RAF1-212ENST00000494557 SETD5Q9C0A6 1442 aa12.84□□□□□ -0.35
RAF1-212ENST00000494557 SYNJ2O15056 1496 aa12.83□□□□□ -0.36
RAF1-212ENST00000494557 DENND4BO75064 1496 aaPredicted RBP12.82□□□□□ -0.36
RAF1-212ENST00000494557 CDC42BPAQ5VT25 1732 aa12.81□□□□□ -0.36
RAF1-212ENST00000494557 CCER1Q8TC90 406 aaPredicted RBP12.81□□□□□ -0.36
RAF1-212ENST00000494557 ZNF608Q9ULD9 1512 aaPredicted RBP12.81□□□□□ -0.36
RAF1-212ENST00000494557 NUP153P49790 1475 aaKnown RBP12.79□□□□□ -0.36
RAF1-212ENST00000494557 RAB3GAP2Q9H2M9 1393 aa12.79□□□□□ -0.36
RAF1-212ENST00000494557 TIMELESSQ9UNS1 1208 aa12.79□□□□□ -0.36
RAF1-212ENST00000494557 ADGRL2O95490 1459 aa12.78□□□□□ -0.36
RAF1-212ENST00000494557 PTPRKQ15262 1439 aa12.78□□□□□ -0.36
RAF1-212ENST00000494557 KDM5DQ9BY66 1539 aa12.78□□□□□ -0.36
RAF1-212ENST00000494557 EHMT2Q96KQ7 1210 aa12.77□□□□□ -0.36
RAF1-212ENST00000494557 UACAQ9BZF9 1416 aa12.77□□□□□ -0.37
RAF1-212ENST00000494557 TDRD9Q8NDG6 1382 aaKnown RBP12.76□□□□□ -0.37
RAF1-212ENST00000494557 NAIPQ13075 1403 aa12.76□□□□□ -0.37
RAF1-212ENST00000494557 ROCK1Q13464 1354 aa12.75□□□□□ -0.37
RAF1-212ENST00000494557 ARHGEF5Q12774 1597 aa12.74□□□□□ -0.37
RAF1-212ENST00000494557 ZNF316A6NFI3 1004 aaPredicted RBP12.74□□□□□ -0.37
RAF1-212ENST00000494557 SHANK2Q9UPX8 1470 aa12.74□□□□□ -0.37
RAF1-212ENST00000494557 KDM6BO15054 1643 aa12.74□□□□□ -0.37
RAF1-212ENST00000494557 CHD1O14646 1710 aa12.73□□□□□ -0.37
RAF1-212ENST00000494557 MAST1Q9Y2H9 1570 aa12.73□□□□□ -0.37
RAF1-212ENST00000494557 APLP2Q06481 763 aa12.73□□□□□ -0.37
RAF1-212ENST00000494557 DNAJC5BQ9UF47 199 aa12.73□□□□□ -0.37
RAF1-212ENST00000494557 ACIN1Q9UKV3 1341 aaKnown RBP12.72□□□□□ -0.37
RAF1-212ENST00000494557 PREX2Q70Z35 1606 aa12.72□□□□□ -0.37
RAF1-212ENST00000494557 ABCC10Q5T3U5 1492 aa12.7□□□□□ -0.38
RAF1-212ENST00000494557 CDK13Q14004 1512 aaKnown RBP12.69□□□□□ -0.38
RAF1-212ENST00000494557 KIF14Q15058 1648 aa12.68□□□□□ -0.38
RAF1-212ENST00000494557 CDC42BPBQ9Y5S2 1711 aa12.68□□□□□ -0.38
RAF1-212ENST00000494557 CLASP1Q7Z460 1538 aa12.67□□□□□ -0.38
RAF1-212ENST00000494557 PELP1Q8IZL8 1130 aaKnown RBP12.66□□□□□ -0.38
RAF1-212ENST00000494557 MBD5Q9P267 1494 aa12.65□□□□□ -0.38
RAF1-212ENST00000494557 PLXNC1O60486 1568 aa12.64□□□□□ -0.39
RAF1-212ENST00000494557 UNC13BO14795 1591 aa12.63□□□□□ -0.39
RAF1-212ENST00000494557 DIEXFQ68CQ4 756 aaKnown RBP12.63□□□□□ -0.39
RAF1-212ENST00000494557 TROQ12816 1431 aaPredicted RBP12.62□□□□□ -0.39
RAF1-212ENST00000494557 DAPK1P53355 1430 aa12.62□□□□□ -0.39
RAF1-212ENST00000494557 ARAP3Q8WWN8 1544 aa12.61□□□□□ -0.39
RAF1-212ENST00000494557 LAMC1P11047 1609 aa12.61□□□□□ -0.39
RAF1-212ENST00000494557 TEX14Q8IWB6 1497 aa12.6□□□□□ -0.39
RAF1-212ENST00000494557 GPATCH8Q9UKJ3 1502 aaKnown RBP12.58□□□□□ -0.4
RAF1-212ENST00000494557 MAGI2Q86UL8 1455 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms