RNA–Protein interactions for RNA: ENST00000493815.5

PDLIM7-208, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,686 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-208ENST00000493815 KIF21BO75037 1637 aa29.42■■■□□ 2.3
PDLIM7-208ENST00000493815 JPH4Q96JJ6 628 aa29.4■■■□□ 2.3
PDLIM7-208ENST00000493815 ARHGEF11O15085 1522 aa29.36■■■□□ 2.29
PDLIM7-208ENST00000493815 IQGAP2Q13576 1575 aa29.33■■■□□ 2.29
PDLIM7-208ENST00000493815 SHROOM2Q13796 1616 aa29.32■■■□□ 2.28
PDLIM7-208ENST00000493815 GOLGA3Q08378 1498 aa29.32■■■□□ 2.28
PDLIM7-208ENST00000493815 RIMBP3CA6NJZ7 1639 aa29.32■■■□□ 2.28
PDLIM7-208ENST00000493815 RIMBP3BA6NNM3 1639 aa29.32■■■□□ 2.28
PDLIM7-208ENST00000493815 RIMBP3Q9UFD9 1639 aa29.32■■■□□ 2.28
PDLIM7-208ENST00000493815 ERCC6L2Q5T890 1561 aa29.31■■■□□ 2.28
PDLIM7-208ENST00000493815 UBTFP17480 764 aaKnown RBP29.31■■■□□ 2.28
PDLIM7-208ENST00000493815 PRG4Q92954 1404 aaPredicted RBP29.3■■■□□ 2.28
PDLIM7-208ENST00000493815 CTTNBP2Q8WZ74 1663 aa29.29■■■□□ 2.28
PDLIM7-208ENST00000493815 RANGAP1P46060 587 aaPredicted RBP29.24■■■□□ 2.27
PDLIM7-208ENST00000493815 ARAP1Q96P48 1450 aa29.17■■■□□ 2.26
PDLIM7-208ENST00000493815 CYB5RLQ6IPT4 315 aa29.17■■■□□ 2.26
PDLIM7-208ENST00000493815 UGGT2Q9NYU1 1516 aa29.17■■■□□ 2.26
PDLIM7-208ENST00000493815 LOC105371045A0A1W2PR82 267 aa29.16■■■□□ 2.26
PDLIM7-208ENST00000493815 DISP1Q96F81 1524 aa29.13■■■□□ 2.25
PDLIM7-208ENST00000493815 TTBK1Q5TCY1 1321 aaPredicted RBP29.12■■■□□ 2.25
PDLIM7-208ENST00000493815 CARMIL2Q6F5E8 1435 aa29.11■■■□□ 2.25
PDLIM7-208ENST00000493815 P3H3Q8IVL6 736 aa29.08■■■□□ 2.25
PDLIM7-208ENST00000493815 KIAA0556O60303 1618 aa29.05■■■□□ 2.24
PDLIM7-208ENST00000493815 TNIKQ9UKE5 1360 aa29.02■■■□□ 2.24
PDLIM7-208ENST00000493815 PTPRGP23470 1445 aa28.99■■■□□ 2.23
PDLIM7-208ENST00000493815 SAMD9Q5K651 1589 aa28.96■■■□□ 2.23
PDLIM7-208ENST00000493815 FHOD3Q2V2M9 1422 aa28.92■■■□□ 2.22
PDLIM7-208ENST00000493815 ARHGAP35Q9NRY4 1499 aa28.89■■■□□ 2.21
PDLIM7-208ENST00000493815 EFCAB5A4FU69 1503 aa28.88■■■□□ 2.21
PDLIM7-208ENST00000493815 CLIP1P30622 1438 aa28.84■■■□□ 2.21
PDLIM7-208ENST00000493815 CEP162Q5TB80 1403 aa28.81■■■□□ 2.2
PDLIM7-208ENST00000493815 PLB1Q6P1J6 1458 aa28.8■■■□□ 2.2
PDLIM7-208ENST00000493815 UACAQ9BZF9 1416 aa28.79■■■□□ 2.2
PDLIM7-208ENST00000493815 ADCY10Q96PN6 1610 aa28.78■■■□□ 2.2
PDLIM7-208ENST00000493815 ABCA8O94911 1581 aa28.7■■■□□ 2.19
PDLIM7-208ENST00000493815 ABCC2Q92887 1545 aa28.7■■■□□ 2.19
PDLIM7-208ENST00000493815 ARID3CA6NKF2 412 aa28.69■■■□□ 2.18
PDLIM7-208ENST00000493815 UHRF1BP1LA0JNW5 1464 aa28.68■■■□□ 2.18
PDLIM7-208ENST00000493815 NPM1P06748 294 aaKnown RBP eCLIP28.66■■■□□ 2.18
PDLIM7-208ENST00000493815 FMN1Q68DA7 1419 aa28.65■■■□□ 2.18
PDLIM7-208ENST00000493815 RAPGEF6Q8TEU7 1601 aa28.63■■■□□ 2.17
PDLIM7-208ENST00000493815 ATP1B4Q9UN42 357 aaPredicted RBP28.61■■■□□ 2.17
PDLIM7-208ENST00000493815 KDM5BQ9UGL1 1544 aa28.57■■■□□ 2.16
PDLIM7-208ENST00000493815 NUP153P49790 1475 aaKnown RBP28.57■■■□□ 2.16
PDLIM7-208ENST00000493815 ZCCHC11Q5TAX3 1644 aaKnown RBP28.53■■■□□ 2.16
PDLIM7-208ENST00000493815 ATP10BO94823 1461 aa28.52■■■□□ 2.16
PDLIM7-208ENST00000493815 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.51■■■□□ 2.15
PDLIM7-208ENST00000493815 HNRNPUL2Q1KMD3 747 aaKnown RBP28.51■■■□□ 2.15
PDLIM7-208ENST00000493815 PCF11O94913 1555 aaKnown RBP28.5■■■□□ 2.15
PDLIM7-208ENST00000493815 CASKIN1Q8WXD9 1431 aa28.48■■■□□ 2.15
PDLIM7-208ENST00000493815 ASXL2Q76L83 1435 aa28.47■■■□□ 2.15
PDLIM7-208ENST00000493815 MAPKBP1O60336 1514 aa28.47■■■□□ 2.15
PDLIM7-208ENST00000493815 TRHP20396 242 aaPredicted RBP28.45■■■□□ 2.15
PDLIM7-208ENST00000493815 HECW1Q76N89 1606 aa28.45■■■□□ 2.15
PDLIM7-208ENST00000493815 CDK13Q14004 1512 aaKnown RBP28.45■■■□□ 2.14
PDLIM7-208ENST00000493815 EPRSP07814 1512 aaKnown RBP28.42■■■□□ 2.14
PDLIM7-208ENST00000493815 FYCO1Q9BQS8 1478 aa28.41■■■□□ 2.14
PDLIM7-208ENST00000493815 VPS8Q8N3P4 1428 aa28.4■■■□□ 2.14
PDLIM7-208ENST00000493815 LRRIQ1Q96JM4 1722 aa28.37■■■□□ 2.13
PDLIM7-208ENST00000493815 KCNH8Q96L42 1107 aa28.35■■■□□ 2.13
PDLIM7-208ENST00000493815 WDR7Q9Y4E6 1490 aa28.35■■■□□ 2.13
PDLIM7-208ENST00000493815 FAM69CQ0P6D2 419 aa28.33■■■□□ 2.13
PDLIM7-208ENST00000493815 ABCC10Q5T3U5 1492 aa28.33■■■□□ 2.13
PDLIM7-208ENST00000493815 PLEKHD1A6NEE1 506 aa28.31■■■□□ 2.12
PDLIM7-208ENST00000493815 CCDC18Q5T9S5 1454 aa28.29■■■□□ 2.12
PDLIM7-208ENST00000493815 DIP2BQ9P265 1576 aa28.28■■■□□ 2.12
PDLIM7-208ENST00000493815 CDK11AQ9UQ88 783 aaPredicted RBP28.24■■■□□ 2.11
PDLIM7-208ENST00000493815 KIF13AQ9H1H9 1805 aa28.24■■■□□ 2.11
PDLIM7-208ENST00000493815 MAGI3Q5TCQ9 1506 aa28.2■■■□□ 2.1
PDLIM7-208ENST00000493815 TROQ12816 1431 aaPredicted RBP28.16■■■□□ 2.1
PDLIM7-208ENST00000493815 GLI2P10070 1586 aa28.15■■■□□ 2.1
PDLIM7-208ENST00000493815 TIAM1Q13009 1591 aa28.12■■■□□ 2.09
PDLIM7-208ENST00000493815 MTUS2Q5JR59 1369 aa28.11■■■□□ 2.09
PDLIM7-208ENST00000493815 KIF14Q15058 1648 aa28.1■■■□□ 2.09
PDLIM7-208ENST00000493815 CFAP43Q8NDM7 1665 aa28.1■■■□□ 2.09
PDLIM7-208ENST00000493815 APLP2Q06481 763 aa28.1■■■□□ 2.09
PDLIM7-208ENST00000493815 TSPOAP1O95153 1857 aa28.08■■■□□ 2.09
PDLIM7-208ENST00000493815 KANK4Q5T7N3 995 aaPredicted RBP28.08■■■□□ 2.09
PDLIM7-208ENST00000493815 CD109Q6YHK3 1445 aa28.07■■■□□ 2.08
PDLIM7-208ENST00000493815 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.07■■■□□ 2.082e-7■■□□□ 13
PDLIM7-208ENST00000493815 MAP3K4Q9Y6R4 1608 aa28.07■■■□□ 2.08
PDLIM7-208ENST00000493815 ABCA9Q8IUA7 1624 aa28.06■■■□□ 2.08
PDLIM7-208ENST00000493815 TTC37Q6PGP7 1564 aa28.05■■■□□ 2.08
PDLIM7-208ENST00000493815 MAP3K1Q13233 1512 aa28.03■■■□□ 2.08
PDLIM7-208ENST00000493815 LRRC9Q6ZRR7 1453 aa28.02■■■□□ 2.08
PDLIM7-208ENST00000493815 EHBP1L1Q8N3D4 1523 aa28.01■■■□□ 2.07
PDLIM7-208ENST00000493815 PPRC1Q5VV67 1664 aaKnown RBP27.99■■■□□ 2.07
PDLIM7-208ENST00000493815 PPARGC1BQ86YN6 1023 aaKnown RBP27.94■■■□□ 2.06
PDLIM7-208ENST00000493815 NCOA2Q15596 1464 aa27.9■■■□□ 2.06
PDLIM7-208ENST00000493815 TEX14Q8IWB6 1497 aa27.9■■■□□ 2.06
PDLIM7-208ENST00000493815 PLCH2O75038 1416 aa27.9■■■□□ 2.06
PDLIM7-208ENST00000493815 CCNB3Q8WWL7 1395 aa27.87■■■□□ 2.05
PDLIM7-208ENST00000493815 SUPT6HQ7KZ85 1726 aaKnown RBP27.87■■■□□ 2.05
PDLIM7-208ENST00000493815 MYO5CQ9NQX4 1742 aa27.86■■■□□ 2.05
PDLIM7-208ENST00000493815 FANCAO15360 1455 aa27.85■■■□□ 2.05
PDLIM7-208ENST00000493815 GPATCH8Q9UKJ3 1502 aaKnown RBP27.85■■■□□ 2.05
PDLIM7-208ENST00000493815 ARHGAP5Q13017 1502 aa27.84■■■□□ 2.05
PDLIM7-208ENST00000493815 CDC42BPAQ5VT25 1732 aa27.82■■■□□ 2.04
PDLIM7-208ENST00000493815 EFCAB2Q5VUJ9 269 aa27.81■■■□□ 2.04
PDLIM7-208ENST00000493815 PREX2Q70Z35 1606 aa27.8■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms