RNA–Protein interactions for RNA: ENST00000493510.1

KPNA1-209, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 4

Gene KPNA1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-209ENST00000493510 AQRO60306 1485 aaKnown RBP eCLIP13.6□□□□□ -0.236e-7■□□□□ 10.8
KPNA1-209ENST00000493510 CHMP7Q8WUX9 453 aaPredicted RBP13.56□□□□□ -0.24
KPNA1-209ENST00000493510 CFTRP13569 1480 aa13.55□□□□□ -0.24
KPNA1-209ENST00000493510 ABCC10Q5T3U5 1492 aa13.55□□□□□ -0.24
KPNA1-209ENST00000493510 CERKQ8TCT0 537 aa13.53□□□□□ -0.24
KPNA1-209ENST00000493510 MROH2BQ7Z745 1585 aa13.43□□□□□ -0.26
KPNA1-209ENST00000493510 MYCNP04198 464 aaPredicted RBP13.42□□□□□ -0.26
KPNA1-209ENST00000493510 TOPBP1Q92547 1522 aa13.42□□□□□ -0.26
KPNA1-209ENST00000493510 SNAPC4Q5SXM2 1469 aa13.41□□□□□ -0.26
KPNA1-209ENST00000493510 NPM1P06748 294 aaKnown RBP eCLIP13.4□□□□□ -0.26
KPNA1-209ENST00000493510 DIP2BQ9P265 1576 aa13.39□□□□□ -0.27
KPNA1-209ENST00000493510 TOP2BQ02880 1626 aa13.38□□□□□ -0.27
KPNA1-209ENST00000493510 ATXN8OSP0DMR3 200 aa13.36□□□□□ -0.27
KPNA1-209ENST00000493510 ABCC8Q09428 1581 aa13.36□□□□□ -0.27
KPNA1-209ENST00000493510 MAGI1Q96QZ7 1491 aaPredicted RBP13.35□□□□□ -0.27
KPNA1-209ENST00000493510 TARBP1Q13395 1621 aaKnown RBP13.35□□□□□ -0.27
KPNA1-209ENST00000493510 MAPKBP1O60336 1514 aa13.33□□□□□ -0.28
KPNA1-209ENST00000493510 TDRD9Q8NDG6 1382 aaKnown RBP13.32□□□□□ -0.28
KPNA1-209ENST00000493510 DCAF8L1A6NGE4 600 aa13.31□□□□□ -0.28
KPNA1-209ENST00000493510 TSPOAP1O95153 1857 aa13.25□□□□□ -0.29
KPNA1-209ENST00000493510 DNMBPQ6XZF7 1577 aa13.22□□□□□ -0.29
KPNA1-209ENST00000493510 PCF11O94913 1555 aaKnown RBP13.21□□□□□ -0.29
KPNA1-209ENST00000493510 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.21□□□□□ -0.295e-6■■■□□ 18.6
KPNA1-209ENST00000493510 CEP170Q5SW79 1584 aa13.2□□□□□ -0.3
KPNA1-209ENST00000493510 GRIN2BQ13224 1484 aa13.2□□□□□ -0.3
KPNA1-209ENST00000493510 POLA1P09884 1462 aaPredicted RBP13.18□□□□□ -0.3
KPNA1-209ENST00000493510 WDR97A6NE52 1622 aa13.18□□□□□ -0.3
KPNA1-209ENST00000493510 RAD54L2Q9Y4B4 1467 aa13.16□□□□□ -0.3
KPNA1-209ENST00000493510 SOGA1O94964 1423 aa13.15□□□□□ -0.3
KPNA1-209ENST00000493510 COL17A1Q9UMD9 1497 aaPredicted RBP13.15□□□□□ -0.3
KPNA1-209ENST00000493510 PTPRMP28827 1452 aa13.13□□□□□ -0.31
KPNA1-209ENST00000493510 HSPA2P54652 639 aa13.09□□□□□ -0.31
KPNA1-209ENST00000493510 PRDM2Q13029 1718 aa13.09□□□□□ -0.31
KPNA1-209ENST00000493510 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.06□□□□□ -0.32
KPNA1-209ENST00000493510 HNRNPUL2Q1KMD3 747 aaKnown RBP13.06□□□□□ -0.32
KPNA1-209ENST00000493510 SHROOM2Q13796 1616 aa13.06□□□□□ -0.32
KPNA1-209ENST00000493510 ATF5Q9Y2D1 282 aaPredicted RBP13.05□□□□□ -0.32
KPNA1-209ENST00000493510 PRG4Q92954 1404 aaPredicted RBP13.05□□□□□ -0.32
KPNA1-209ENST00000493510 FKBP8Q14318 412 aa13.04□□□□□ -0.32
KPNA1-209ENST00000493510 WIZO95785 1651 aa13.03□□□□□ -0.32
KPNA1-209ENST00000493510 SAMD1Q6SPF0 538 aaPredicted RBP13.03□□□□□ -0.32
KPNA1-209ENST00000493510 U3KPZ7 1027 aaPredicted RBP13.03□□□□□ -0.32
KPNA1-209ENST00000493510 NUP160Q12769 1436 aa13.02□□□□□ -0.33
KPNA1-209ENST00000493510 TEX14Q8IWB6 1497 aa13.01□□□□□ -0.33
KPNA1-209ENST00000493510 PPRC1Q5VV67 1664 aaKnown RBP13.01□□□□□ -0.33
KPNA1-209ENST00000493510 ADCY10Q96PN6 1610 aa13□□□□□ -0.33
KPNA1-209ENST00000493510 GRIN2AQ12879 1464 aa13□□□□□ -0.33
KPNA1-209ENST00000493510 GLI2P10070 1586 aa12.98□□□□□ -0.33
KPNA1-209ENST00000493510 MED1Q15648 1581 aaPredicted RBP12.96□□□□□ -0.33
KPNA1-209ENST00000493510 JPH4Q96JJ6 628 aa12.95□□□□□ -0.34
KPNA1-209ENST00000493510 IQSEC2Q5JU85 1478 aa12.92□□□□□ -0.34
KPNA1-209ENST00000493510 PLB1Q6P1J6 1458 aa12.91□□□□□ -0.34
KPNA1-209ENST00000493510 ADAMTSL3P82987 1691 aa12.9□□□□□ -0.34
KPNA1-209ENST00000493510 KIF21BO75037 1637 aa12.89□□□□□ -0.35
KPNA1-209ENST00000493510 FGD5Q6ZNL6 1462 aa12.88□□□□□ -0.35
KPNA1-209ENST00000493510 ASXL2Q76L83 1435 aa12.88□□□□□ -0.35
KPNA1-209ENST00000493510 PBRM1Q86U86 1689 aa12.87□□□□□ -0.35
KPNA1-209ENST00000493510 YEATS2Q9ULM3 1422 aa12.85□□□□□ -0.35
KPNA1-209ENST00000493510 TOP2AP11388 1531 aaKnown RBP12.84□□□□□ -0.35
KPNA1-209ENST00000493510 UBAP1LF5GYI3 381 aa12.83□□□□□ -0.36
KPNA1-209ENST00000493510 AMER1Q5JTC6 1135 aaPredicted RBP12.83□□□□□ -0.36
KPNA1-209ENST00000493510 RTN4Q9NQC3 1192 aaKnown RBP12.83□□□□□ -0.36
KPNA1-209ENST00000493510 KIAA0586Q9BVV6 1533 aa12.83□□□□□ -0.36
KPNA1-209ENST00000493510 MAP3K4Q9Y6R4 1608 aa12.8□□□□□ -0.36
KPNA1-209ENST00000493510 APLP2Q06481 763 aa12.79□□□□□ -0.36
KPNA1-209ENST00000493510 ZNF219Q9P2Y4 722 aaPredicted RBP12.78□□□□□ -0.36
KPNA1-209ENST00000493510 EPRSP07814 1512 aaKnown RBP12.78□□□□□ -0.36
KPNA1-209ENST00000493510 MADDQ8WXG6 1647 aa12.77□□□□□ -0.36
KPNA1-209ENST00000493510 ARID4BQ4LE39 1312 aaPredicted RBP12.77□□□□□ -0.37
KPNA1-209ENST00000493510 ABCC2Q92887 1545 aa12.77□□□□□ -0.37
KPNA1-209ENST00000493510 PTPRTO14522 1441 aa12.76□□□□□ -0.37
KPNA1-209ENST00000493510 HSPA1LP34931 641 aa12.75□□□□□ -0.37
KPNA1-209ENST00000493510 LTBP4Q8N2S1 1624 aa12.74□□□□□ -0.37
KPNA1-209ENST00000493510 ADAMTS12P58397 1594 aa12.74□□□□□ -0.37
KPNA1-209ENST00000493510 FHAD1B1AJZ9 1412 aa12.74□□□□□ -0.37
KPNA1-209ENST00000493510 IFFO2Q5TF58 517 aa12.74□□□□□ -0.37
KPNA1-209ENST00000493510 CCDC88BA6NC98 1476 aa12.72□□□□□ -0.37
KPNA1-209ENST00000493510 BCORL1Q5H9F3 1711 aa12.71□□□□□ -0.37
KPNA1-209ENST00000493510 ABCA5Q8WWZ7 1642 aa12.71□□□□□ -0.37
KPNA1-209ENST00000493510 PTPRGP23470 1445 aa12.68□□□□□ -0.38
KPNA1-209ENST00000493510 ABCA10Q8WWZ4 1543 aa12.67□□□□□ -0.38
KPNA1-209ENST00000493510 RIMS1Q86UR5 1692 aaKnown RBP12.67□□□□□ -0.38
KPNA1-209ENST00000493510 CFAP43Q8NDM7 1665 aa12.65□□□□□ -0.38
KPNA1-209ENST00000493510 MAGI3Q5TCQ9 1506 aa12.65□□□□□ -0.38
KPNA1-209ENST00000493510 SRCAPQ6ZRS2 3230 aa12.65□□□□□ -0.38
KPNA1-209ENST00000493510 STRCQ7RTU9 1775 aa12.62□□□□□ -0.39
KPNA1-209ENST00000493510 RGS17Q9UGC6 210 aaPredicted RBP12.62□□□□□ -0.39
KPNA1-209ENST00000493510 CD109Q6YHK3 1445 aa12.62□□□□□ -0.39
KPNA1-209ENST00000493510 CUX1P39880 1505 aa12.6□□□□□ -0.39
KPNA1-209ENST00000493510 TTBK1Q5TCY1 1321 aaPredicted RBP12.6□□□□□ -0.39
KPNA1-209ENST00000493510 RUSC2Q8N2Y8 1516 aa12.59□□□□□ -0.39
KPNA1-209ENST00000493510 ARAP3Q8WWN8 1544 aa12.59□□□□□ -0.39
KPNA1-209ENST00000493510 PIP4K2BP78356 416 aa12.59□□□□□ -0.39
KPNA1-209ENST00000493510 UHRF1BP1LA0JNW5 1464 aa12.57□□□□□ -0.4
KPNA1-209ENST00000493510 POGZQ7Z3K3 1410 aa12.55□□□□□ -0.4
KPNA1-209ENST00000493510 CUL7Q14999 1698 aa12.55□□□□□ -0.4
KPNA1-209ENST00000493510 TOM1O60784 492 aa12.55□□□□□ -0.4
KPNA1-209ENST00000493510 SPINK5Q9NQ38 1064 aaPredicted RBP12.53□□□□□ -0.4
KPNA1-209ENST00000493510 PREX1Q8TCU6 1659 aa12.53□□□□□ -0.4
KPNA1-209ENST00000493510 UHRF1BP1Q6BDS2 1440 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms