RNA–Protein interactions for RNA: ENST00000493394.1

RGPD5-211, Transcript of RANBP2-like and GRIP domain containing 5, humanhuman

TSL 2

Gene RGPD5, Length 960 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD5-211ENST00000493394 PLSCR2Q9NRY7 297 aa12.93□□□□□ -0.34
RGPD5-211ENST00000493394 WIZO95785 1651 aa12.89□□□□□ -0.35
RGPD5-211ENST00000493394 HMGXB3Q12766 1538 aa12.89□□□□□ -0.35
RGPD5-211ENST00000493394 PEG3Q9GZU2 1588 aa12.86□□□□□ -0.35
RGPD5-211ENST00000493394 CHADLQ6NUI6 762 aa12.86□□□□□ -0.35
RGPD5-211ENST00000493394 ERCC6Q03468 1493 aa12.82□□□□□ -0.36
RGPD5-211ENST00000493394 PRR29P0C7W0 189 aa12.79□□□□□ -0.36
RGPD5-211ENST00000493394 TOP2AP11388 1531 aaKnown RBP12.78□□□□□ -0.36
RGPD5-211ENST00000493394 CADPSQ9ULU8 1353 aa12.78□□□□□ -0.36
RGPD5-211ENST00000493394 PDS5BQ9NTI5 1447 aa12.76□□□□□ -0.37
RGPD5-211ENST00000493394 POTEIP0CG38 1075 aa12.74□□□□□ -0.37
RGPD5-211ENST00000493394 CCDC88BA6NC98 1476 aa12.72□□□□□ -0.37
RGPD5-211ENST00000493394 NESP48681 1621 aa12.71□□□□□ -0.37
RGPD5-211ENST00000493394 CLCN6P51797 869 aa12.71□□□□□ -0.37
RGPD5-211ENST00000493394 CD44P16070 742 aaKnown RBP12.68□□□□□ -0.38
RGPD5-211ENST00000493394 LAMC3Q9Y6N6 1575 aa12.65□□□□□ -0.38
RGPD5-211ENST00000493394 FARP1Q9Y4F1 1045 aaPredicted RBP12.65□□□□□ -0.38
RGPD5-211ENST00000493394 CFTRP13569 1480 aa12.61□□□□□ -0.39
RGPD5-211ENST00000493394 FANCD2Q9BXW9 1451 aa12.59□□□□□ -0.39
RGPD5-211ENST00000493394 CEP164Q9UPV0 1460 aa12.58□□□□□ -0.4
RGPD5-211ENST00000493394 DCBLD2Q96PD2 775 aa12.54□□□□□ -0.4
RGPD5-211ENST00000493394 MRC2Q9UBG0 1479 aa12.5□□□□□ -0.41
RGPD5-211ENST00000493394 ZNF579Q8NAF0 562 aaKnown RBP12.49□□□□□ -0.41
RGPD5-211ENST00000493394 CUX2O14529 1486 aa12.46□□□□□ -0.41
RGPD5-211ENST00000493394 ABCC8Q09428 1581 aa12.44□□□□□ -0.42
RGPD5-211ENST00000493394 SPDYE4A6NLX3 237 aa12.43□□□□□ -0.42
RGPD5-211ENST00000493394 ZRANB1Q9UGI0 708 aa12.42□□□□□ -0.42
RGPD5-211ENST00000493394 KIF21AQ7Z4S6 1674 aa12.41□□□□□ -0.42
RGPD5-211ENST00000493394 TRIM41Q8WV44 630 aa12.4□□□□□ -0.42
RGPD5-211ENST00000493394 OTUD5Q96G74 571 aa12.37□□□□□ -0.43
RGPD5-211ENST00000493394 URB2Q14146 1524 aaKnown RBP12.37□□□□□ -0.43
RGPD5-211ENST00000493394 CREBZFQ9NS37 354 aa12.36□□□□□ -0.43
RGPD5-211ENST00000493394 SOGA1O94964 1423 aa12.36□□□□□ -0.43
RGPD5-211ENST00000493394 WRNQ14191 1432 aaPredicted RBP eCLIP12.35□□□□□ -0.43
RGPD5-211ENST00000493394 WDR62O43379 1518 aa12.34□□□□□ -0.43
RGPD5-211ENST00000493394 TOPBP1Q92547 1522 aa12.34□□□□□ -0.43
RGPD5-211ENST00000493394 GALR2O43603 387 aaPredicted RBP12.34□□□□□ -0.43
RGPD5-211ENST00000493394 THOC2Q8NI27 1593 aaKnown RBP12.32□□□□□ -0.44
RGPD5-211ENST00000493394 POTEB2H3BUK9 544 aa12.31□□□□□ -0.44
RGPD5-211ENST00000493394 STAG3Q9UJ98 1225 aa12.31□□□□□ -0.44
RGPD5-211ENST00000493394 IFT140Q96RY7 1462 aa12.31□□□□□ -0.44
RGPD5-211ENST00000493394 DNMBPQ6XZF7 1577 aa12.3□□□□□ -0.44
RGPD5-211ENST00000493394 TDRD9Q8NDG6 1382 aaKnown RBP12.29□□□□□ -0.44
RGPD5-211ENST00000493394 PROM2Q8N271 834 aa12.27□□□□□ -0.45
RGPD5-211ENST00000493394 CHMP7Q8WUX9 453 aaPredicted RBP12.27□□□□□ -0.45
RGPD5-211ENST00000493394 PRDM2Q13029 1718 aa12.26□□□□□ -0.45
RGPD5-211ENST00000493394 FGD5Q6ZNL6 1462 aa12.26□□□□□ -0.45
RGPD5-211ENST00000493394 RAD54L2Q9Y4B4 1467 aa12.26□□□□□ -0.45
RGPD5-211ENST00000493394 POLA1P09884 1462 aaPredicted RBP12.24□□□□□ -0.45
RGPD5-211ENST00000493394 CUX1P39880 1505 aa12.24□□□□□ -0.45
RGPD5-211ENST00000493394 AQRO60306 1485 aaKnown RBP eCLIP12.23□□□□□ -0.45
RGPD5-211ENST00000493394 POTEMA6NI47 508 aa12.23□□□□□ -0.45
RGPD5-211ENST00000493394 PAK3O75914 559 aaPredicted RBP12.21□□□□□ -0.45
RGPD5-211ENST00000493394 PHF12Q96QT6 1004 aa12.2□□□□□ -0.46
RGPD5-211ENST00000493394 ZNF608Q9ULD9 1512 aaPredicted RBP12.18□□□□□ -0.46
RGPD5-211ENST00000493394 POTEGQ6S5H5 508 aa12.18□□□□□ -0.46
RGPD5-211ENST00000493394 FAM9AQ8IZU1 332 aaPredicted RBP12.18□□□□□ -0.46
RGPD5-211ENST00000493394 PELP1Q8IZL8 1130 aaKnown RBP12.17□□□□□ -0.46
RGPD5-211ENST00000493394 GAPVD1Q14C86 1478 aa12.14□□□□□ -0.47
RGPD5-211ENST00000493394 KIF27Q86VH2 1401 aa12.14□□□□□ -0.47
RGPD5-211ENST00000493394 TOP2BQ02880 1626 aa12.14□□□□□ -0.47
RGPD5-211ENST00000493394 NPM1P06748 294 aaKnown RBP eCLIP12.13□□□□□ -0.47
RGPD5-211ENST00000493394 DNAJC5Q9H3Z4 198 aa12.13□□□□□ -0.47
RGPD5-211ENST00000493394 PCDH10Q9P2E7 1040 aa12.13□□□□□ -0.47
RGPD5-211ENST00000493394 GRIN2BQ13224 1484 aa12.13□□□□□ -0.47
RGPD5-211ENST00000493394 SYNJ1O43426 1573 aa12.12□□□□□ -0.47
RGPD5-211ENST00000493394 MNX1P50219 401 aaPredicted RBP12.11□□□□□ -0.47
RGPD5-211ENST00000493394 ABCA10Q8WWZ4 1543 aa12.11□□□□□ -0.47
RGPD5-211ENST00000493394 ASTLQ6HA08 431 aaPredicted RBP12.1□□□□□ -0.47
RGPD5-211ENST00000493394 TARBP1Q13395 1621 aaKnown RBP12.07□□□□□ -0.48
RGPD5-211ENST00000493394 C7P10643 843 aa12.06□□□□□ -0.48
RGPD5-211ENST00000493394 METRNQ9UJH8 293 aa12.06□□□□□ -0.48
RGPD5-211ENST00000493394 BIVM-ERCC5R4GMW8 1640 aa12.06□□□□□ -0.48
RGPD5-211ENST00000493394 SNAPC4Q5SXM2 1469 aa12.06□□□□□ -0.48
RGPD5-211ENST00000493394 POTEJP0CG39 1038 aa12.05□□□□□ -0.48
RGPD5-211ENST00000493394 SLC39A7Q92504 469 aa12.05□□□□□ -0.48
RGPD5-211ENST00000493394 EIF4G3O43432 1585 aaKnown RBP12.05□□□□□ -0.48
RGPD5-211ENST00000493394 ATMINO43313 823 aaPredicted RBP12.04□□□□□ -0.48
RGPD5-211ENST00000493394 FKBP8Q14318 412 aa12.03□□□□□ -0.48
RGPD5-211ENST00000493394 MAMSTRQ6ZN01 415 aa12.03□□□□□ -0.48
RGPD5-211ENST00000493394 IGF1RP08069 1367 aa12.03□□□□□ -0.48
RGPD5-211ENST00000493394 MAGI1Q96QZ7 1491 aaPredicted RBP12.02□□□□□ -0.48
RGPD5-211ENST00000493394 MS4A3Q96HJ5 214 aa12.02□□□□□ -0.49
RGPD5-211ENST00000493394 CARMIL1Q5VZK9 1371 aa12.02□□□□□ -0.49
RGPD5-211ENST00000493394 FHAD1B1AJZ9 1412 aa12.02□□□□□ -0.49
RGPD5-211ENST00000493394 UBTFP17480 764 aaKnown RBP12□□□□□ -0.49
RGPD5-211ENST00000493394 RANGAP1P46060 587 aaPredicted RBP12□□□□□ -0.49
RGPD5-211ENST00000493394 TTBK1Q5TCY1 1321 aaPredicted RBP12□□□□□ -0.49
RGPD5-211ENST00000493394 SYNJ2O15056 1496 aa12□□□□□ -0.49
RGPD5-211ENST00000493394 WDR97A6NE52 1622 aa12□□□□□ -0.49
RGPD5-211ENST00000493394 CYB5RLQ6IPT4 315 aa11.96□□□□□ -0.49
RGPD5-211ENST00000493394 ERICH3Q5RHP9 1530 aa11.96□□□□□ -0.5
RGPD5-211ENST00000493394 LCE2DQ5TA82 110 aaPredicted RBP11.95□□□□□ -0.5
RGPD5-211ENST00000493394 JPH4Q96JJ6 628 aa11.95□□□□□ -0.5
RGPD5-211ENST00000493394 RUSC2Q8N2Y8 1516 aa11.93□□□□□ -0.5
RGPD5-211ENST00000493394 EEA1Q15075 1411 aa11.93□□□□□ -0.5
RGPD5-211ENST00000493394 ABCA5Q8WWZ7 1642 aa11.92□□□□□ -0.5
RGPD5-211ENST00000493394 GRIN2AQ12879 1464 aa11.91□□□□□ -0.5
RGPD5-211ENST00000493394 RAPGEF2Q9Y4G8 1499 aa11.9□□□□□ -0.5
RGPD5-211ENST00000493394 FAM163AQ96GL9 167 aaPredicted RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms