RNA–Protein interactions for RNA: ENST00000493394.1

RGPD5-211, Transcript of RANBP2-like and GRIP domain containing 5, humanhuman

TSL 2

Gene RGPD5, Length 960 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD5-211ENST00000493394 AEBP2Q6ZN18 517 aaPredicted RBP24.95■■□□□ 1.58
RGPD5-211ENST00000493394 CHIC1Q5VXU3 224 aa23.31■■□□□ 1.32
RGPD5-211ENST00000493394 SENP3Q9H4L4 574 aaPredicted RBP21.38■■□□□ 1.01
RGPD5-211ENST00000493394 PHF23Q9BUL5 403 aaPredicted RBP21.02■□□□□ 0.96
RGPD5-211ENST00000493394 FOXD1Q16676 465 aa19.97■□□□□ 0.79
RGPD5-211ENST00000493394 POTEDQ86YR6 584 aa19.67■□□□□ 0.74
RGPD5-211ENST00000493394 MSH5O43196 834 aa18.9■□□□□ 0.62
RGPD5-211ENST00000493394 PIAS4Q8N2W9 510 aaPredicted RBP18.51■□□□□ 0.55
RGPD5-211ENST00000493394 PLPPR3Q6T4P5 718 aa18.32■□□□□ 0.52
RGPD5-211ENST00000493394 PPP6R1Q9UPN7 881 aa18.29■□□□□ 0.52
RGPD5-211ENST00000493394 ADRA2BP18089 450 aa18.18■□□□□ 0.5
RGPD5-211ENST00000493394 NISCHQ9Y2I1 1504 aa16.96■□□□□ 0.3
RGPD5-211ENST00000493394 DMRT2Q9Y5R5 561 aa16.87■□□□□ 0.29
RGPD5-211ENST00000493394 MAPK8IP2Q13387 824 aaPredicted RBP16.86■□□□□ 0.29
RGPD5-211ENST00000493394 SCAF1Q9H7N4 1312 aaKnown RBP16.68■□□□□ 0.26
RGPD5-211ENST00000493394 CACNB1Q02641 598 aaPredicted RBP16.5■□□□□ 0.23
RGPD5-211ENST00000493394 DCAF8L1A6NGE4 600 aa16.13■□□□□ 0.17
RGPD5-211ENST00000493394 RNF39Q9H2S5 420 aa16.09■□□□□ 0.17
RGPD5-211ENST00000493394 HOXD11P31277 338 aaPredicted RBP16.08■□□□□ 0.16
RGPD5-211ENST00000493394 PPP4R3CPQ6ZMV5 832 aa15.98■□□□□ 0.15
RGPD5-211ENST00000493394 C1QBPQ07021 282 aaKnown RBP15.84■□□□□ 0.13
RGPD5-211ENST00000493394 CNKSR2Q8WXI2 1034 aa15.81■□□□□ 0.12
RGPD5-211ENST00000493394 RNF216Q9NWF9 866 aaPredicted RBP15.81■□□□□ 0.12
RGPD5-211ENST00000493394 DNAJC5BQ9UF47 199 aa15.68■□□□□ 0.1
RGPD5-211ENST00000493394 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.26■□□□□ 0.03
RGPD5-211ENST00000493394 NCBP3Q53F19 620 aaKnown RBP15.22■□□□□ 0.03
RGPD5-211ENST00000493394 POTEHQ6S545 545 aa15.18■□□□□ 0.02
RGPD5-211ENST00000493394 NPM3O75607 178 aaKnown RBP15.08■□□□□ 0
RGPD5-211ENST00000493394 KCNA4P22459 653 aa14.99□□□□□ -0.01
RGPD5-211ENST00000493394 U3KPZ7 1027 aaPredicted RBP14.89□□□□□ -0.03
RGPD5-211ENST00000493394 DSG3P32926 999 aa14.88□□□□□ -0.03
RGPD5-211ENST00000493394 CCDC180Q9P1Z9 1646 aa14.87□□□□□ -0.03
RGPD5-211ENST00000493394 SPINK5Q9NQ38 1064 aaPredicted RBP14.82□□□□□ -0.04
RGPD5-211ENST00000493394 CAPN15O75808 1086 aa14.8□□□□□ -0.04
RGPD5-211ENST00000493394 ABCC9O60706 1549 aa14.76□□□□□ -0.05
RGPD5-211ENST00000493394 DCAF8L2P0C7V8 631 aa14.7□□□□□ -0.06
RGPD5-211ENST00000493394 SLC4A2P04920 1241 aa14.46□□□□□ -0.09
RGPD5-211ENST00000493394 TRHP20396 242 aaPredicted RBP14.44□□□□□ -0.1
RGPD5-211ENST00000493394 APLP2Q06481 763 aa14.44□□□□□ -0.1
RGPD5-211ENST00000493394 ZNF219Q9P2Y4 722 aaPredicted RBP14.43□□□□□ -0.1
RGPD5-211ENST00000493394 ABCB7O75027 752 aa14.4□□□□□ -0.1
RGPD5-211ENST00000493394 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.32□□□□□ -0.12
RGPD5-211ENST00000493394 HNRNPUL2Q1KMD3 747 aaKnown RBP14.32□□□□□ -0.12
RGPD5-211ENST00000493394 RBM42Q9BTD8 480 aaKnown RBP14.22□□□□□ -0.13
RGPD5-211ENST00000493394 SAMD1Q6SPF0 538 aaPredicted RBP14.21□□□□□ -0.13
RGPD5-211ENST00000493394 RB1CC1Q8TDY2 1594 aa14.13□□□□□ -0.15
RGPD5-211ENST00000493394 SLC4A1APQ9BWU0 796 aaKnown RBP14.13□□□□□ -0.15
RGPD5-211ENST00000493394 NACADO15069 1562 aa14.11□□□□□ -0.15
RGPD5-211ENST00000493394 CHRDL2Q6WN34 429 aa14.1□□□□□ -0.15
RGPD5-211ENST00000493394 ZCCHC6Q5VYS8 1495 aaKnown RBP14.07□□□□□ -0.16
RGPD5-211ENST00000493394 POLA2Q14181 598 aa13.98□□□□□ -0.17
RGPD5-211ENST00000493394 PABPN1Q86U42 306 aaKnown RBP eCLIP13.97□□□□□ -0.17
RGPD5-211ENST00000493394 MYO15BQ96JP2 1530 aa13.95□□□□□ -0.18
RGPD5-211ENST00000493394 DCAF1Q9Y4B6 1507 aa13.94□□□□□ -0.18
RGPD5-211ENST00000493394 MYCNP04198 464 aaPredicted RBP13.9□□□□□ -0.18
RGPD5-211ENST00000493394 FOXD4L1Q9NU39 408 aa13.87□□□□□ -0.19
RGPD5-211ENST00000493394 ZBTB22O15209 634 aa13.84□□□□□ -0.19
RGPD5-211ENST00000493394 SP7Q8TDD2 431 aaPredicted RBP13.84□□□□□ -0.19
RGPD5-211ENST00000493394 AKT1S1Q96B36 256 aa13.79□□□□□ -0.2
RGPD5-211ENST00000493394 SHROOM4Q9ULL8 1493 aa13.76□□□□□ -0.21
RGPD5-211ENST00000493394 SCRIBQ14160 1630 aa13.75□□□□□ -0.21
RGPD5-211ENST00000493394 ZBTB12Q9Y330 459 aaPredicted RBP13.66□□□□□ -0.22
RGPD5-211ENST00000493394 REM2Q8IYK8 340 aaPredicted RBP13.65□□□□□ -0.22
RGPD5-211ENST00000493394 PIP4P2Q8N4L2 257 aa13.64□□□□□ -0.23
RGPD5-211ENST00000493394 ATF5Q9Y2D1 282 aaPredicted RBP13.64□□□□□ -0.23
RGPD5-211ENST00000493394 HAX1O00165 279 aa13.53□□□□□ -0.24
RGPD5-211ENST00000493394 BICRAQ9NZM4 1560 aa13.52□□□□□ -0.25
RGPD5-211ENST00000493394 UNC13AQ9UPW8 1703 aa13.51□□□□□ -0.25
RGPD5-211ENST00000493394 FXR2P51116 673 aaKnown RBP eCLIP13.51□□□□□ -0.25
RGPD5-211ENST00000493394 OSCARQ8IYS5 282 aa13.51□□□□□ -0.25
RGPD5-211ENST00000493394 PITPNM1O00562 1244 aa13.49□□□□□ -0.25
RGPD5-211ENST00000493394 ATXN8OSP0DMR3 200 aa13.43□□□□□ -0.26
RGPD5-211ENST00000493394 CSRNP3Q8WYN3 585 aa13.36□□□□□ -0.27
RGPD5-211ENST00000493394 EVX2Q03828 476 aa13.34□□□□□ -0.27
RGPD5-211ENST00000493394 EIF4G1Q04637 1599 aaKnown RBP13.28□□□□□ -0.28
RGPD5-211ENST00000493394 CECR2Q9BXF3 1484 aa13.24□□□□□ -0.29
RGPD5-211ENST00000493394 EHMT2Q96KQ7 1210 aa13.22□□□□□ -0.29
RGPD5-211ENST00000493394 CC2D2AQ9P2K1 1620 aa13.21□□□□□ -0.29
RGPD5-211ENST00000493394 SPDYE2BA6NHP3 402 aa13.2□□□□□ -0.3
RGPD5-211ENST00000493394 SPDYE6P0CI01 402 aa13.2□□□□□ -0.3
RGPD5-211ENST00000493394 SPDYE2Q495Y8 402 aa13.2□□□□□ -0.3
RGPD5-211ENST00000493394 BAZ1AQ9NRL2 1556 aaPredicted RBP13.16□□□□□ -0.3
RGPD5-211ENST00000493394 SUPT5HO00267 1087 aaKnown RBP13.13□□□□□ -0.31
RGPD5-211ENST00000493394 PRKAR2AP13861 404 aaKnown RBP13.13□□□□□ -0.31
RGPD5-211ENST00000493394 C19orf67A6NJJ6 358 aa13.1□□□□□ -0.31
RGPD5-211ENST00000493394 FBLN2P98095 1184 aa13.09□□□□□ -0.31
RGPD5-211ENST00000493394 SPDYE1Q8NFV5 336 aaPredicted RBP13.08□□□□□ -0.32
RGPD5-211ENST00000493394 ATAD2BQ9ULI0 1458 aa13.08□□□□□ -0.32
RGPD5-211ENST00000493394 SMARCA2P51531 1590 aa13.07□□□□□ -0.32
RGPD5-211ENST00000493394 SMARCA4P51532 1647 aa13.07□□□□□ -0.32
RGPD5-211ENST00000493394 MROH2BQ7Z745 1585 aa13.07□□□□□ -0.32
RGPD5-211ENST00000493394 NCAPD3P42695 1498 aa13.05□□□□□ -0.32
RGPD5-211ENST00000493394 BAZ1BQ9UIG0 1483 aaKnown RBP13.05□□□□□ -0.32
RGPD5-211ENST00000493394 CLEC11AQ9Y240 323 aa13.05□□□□□ -0.32
RGPD5-211ENST00000493394 MKRN4PQ13434 485 aaPredicted RBP13.03□□□□□ -0.32
RGPD5-211ENST00000493394 RSF1Q96T23 1441 aaPredicted RBP13.02□□□□□ -0.33
RGPD5-211ENST00000493394 GABBR2O75899 941 aa13.01□□□□□ -0.33
RGPD5-211ENST00000493394 LHX8Q68G74 356 aa12.98□□□□□ -0.33
RGPD5-211ENST00000493394 SSUH2Q9Y2M2 353 aa12.97□□□□□ -0.33
RGPD5-211ENST00000493394 ZNF692Q9BU19 519 aaPredicted RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms