RNA–Protein interactions for RNA: ENST00000492779.5

RBM39-237, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-237ENST00000492779 PBRM1Q86U86 1689 aa10.24□□□□□ -0.77
RBM39-237ENST00000492779 PRXQ9BXM0 1461 aa10.23□□□□□ -0.77
RBM39-237ENST00000492779 ERICH3Q5RHP9 1530 aa10.21□□□□□ -0.77
RBM39-237ENST00000492779 EEA1Q15075 1411 aa10.21□□□□□ -0.78
RBM39-237ENST00000492779 FHAD1B1AJZ9 1412 aa10.2□□□□□ -0.78
RBM39-237ENST00000492779 P3H3Q8IVL6 736 aa10.19□□□□□ -0.78
RBM39-237ENST00000492779 ADAMTS12P58397 1594 aa10.19□□□□□ -0.78
RBM39-237ENST00000492779 ZEB1P37275 1124 aaPredicted RBP10.18□□□□□ -0.78
RBM39-237ENST00000492779 SYNJ2O15056 1496 aa10.18□□□□□ -0.78
RBM39-237ENST00000492779 MAGI1Q96QZ7 1491 aaPredicted RBP10.17□□□□□ -0.78
RBM39-237ENST00000492779 GRIN2AQ12879 1464 aa10.17□□□□□ -0.78
RBM39-237ENST00000492779 NEUROD1Q13562 356 aa10.16□□□□□ -0.78
RBM39-237ENST00000492779 CHD1O14646 1710 aa10.15□□□□□ -0.78
RBM39-237ENST00000492779 GOLGA3Q08378 1498 aa10.15□□□□□ -0.78
RBM39-237ENST00000492779 CEP170Q5SW79 1584 aa10.14□□□□□ -0.79
RBM39-237ENST00000492779 OSCARQ8IYS5 282 aa10.13□□□□□ -0.79
RBM39-237ENST00000492779 KIF21BO75037 1637 aa10.13□□□□□ -0.79
RBM39-237ENST00000492779 CUL7Q14999 1698 aa10.13□□□□□ -0.79
RBM39-237ENST00000492779 CCER1Q8TC90 406 aaPredicted RBP10.12□□□□□ -0.79
RBM39-237ENST00000492779 JPH4Q96JJ6 628 aa10.1□□□□□ -0.79
RBM39-237ENST00000492779 AMER1Q5JTC6 1135 aaPredicted RBP10.1□□□□□ -0.79
RBM39-237ENST00000492779 KCNA4P22459 653 aa10.09□□□□□ -0.79
RBM39-237ENST00000492779 NUP160Q12769 1436 aa10.09□□□□□ -0.79
RBM39-237ENST00000492779 TNIKQ9UKE5 1360 aa10.08□□□□□ -0.8
RBM39-237ENST00000492779 ARID3CA6NKF2 412 aa10.07□□□□□ -0.8
RBM39-237ENST00000492779 CEP162Q5TB80 1403 aa10.07□□□□□ -0.8
RBM39-237ENST00000492779 ERCC6L2Q5T890 1561 aa10.07□□□□□ -0.8
RBM39-237ENST00000492779 KIAA0586Q9BVV6 1533 aa10.05□□□□□ -0.8
RBM39-237ENST00000492779 ACIN1Q9UKV3 1341 aaKnown RBP10.05□□□□□ -0.8
RBM39-237ENST00000492779 CLIP1P30622 1438 aa10.04□□□□□ -0.8
RBM39-237ENST00000492779 FHOD3Q2V2M9 1422 aa10.04□□□□□ -0.8
RBM39-237ENST00000492779 ARHGAP35Q9NRY4 1499 aa10.03□□□□□ -0.8
RBM39-237ENST00000492779 PRG4Q92954 1404 aaPredicted RBP10.03□□□□□ -0.8
RBM39-237ENST00000492779 ATP1B4Q9UN42 357 aaPredicted RBP10.02□□□□□ -0.8
RBM39-237ENST00000492779 IQGAP2Q13576 1575 aa10.02□□□□□ -0.8
RBM39-237ENST00000492779 ARAP1Q96P48 1450 aa10.02□□□□□ -0.81
RBM39-237ENST00000492779 DIEXFQ68CQ4 756 aaKnown RBP10.02□□□□□ -0.81
RBM39-237ENST00000492779 CTTNBP2Q8WZ74 1663 aa10.01□□□□□ -0.81
RBM39-237ENST00000492779 CLASP1Q7Z460 1538 aa10.01□□□□□ -0.81
RBM39-237ENST00000492779 DISP1Q96F81 1524 aa10□□□□□ -0.81
RBM39-237ENST00000492779 GTF3C3Q9Y5Q9 886 aa10□□□□□ -0.81
RBM39-237ENST00000492779 NCBP3Q53F19 620 aaKnown RBP10□□□□□ -0.81
RBM39-237ENST00000492779 CYB5RLQ6IPT4 315 aa9.99□□□□□ -0.81
RBM39-237ENST00000492779 UGGT2Q9NYU1 1516 aa9.95□□□□□ -0.82
RBM39-237ENST00000492779 PLB1Q6P1J6 1458 aa9.95□□□□□ -0.82
RBM39-237ENST00000492779 HNRNPUL2Q1KMD3 747 aaKnown RBP9.94□□□□□ -0.82
RBM39-237ENST00000492779 ARHGEF11O15085 1522 aa9.94□□□□□ -0.82
RBM39-237ENST00000492779 KIAA0556O60303 1618 aa9.94□□□□□ -0.82
RBM39-237ENST00000492779 DAXXQ9UER7 740 aaPredicted RBP9.93□□□□□ -0.82
RBM39-237ENST00000492779 SHROOM2Q13796 1616 aa9.93□□□□□ -0.82
RBM39-237ENST00000492779 SAMD9Q5K651 1589 aa9.93□□□□□ -0.82
RBM39-237ENST00000492779 PTPRGP23470 1445 aa9.93□□□□□ -0.82
RBM39-237ENST00000492779 YTHDC1Q96MU7 727 aaKnown RBP9.92□□□□□ -0.82
RBM39-237ENST00000492779 CARMIL2Q6F5E8 1435 aa9.92□□□□□ -0.82
RBM39-237ENST00000492779 DNAJC5Q9H3Z4 198 aa9.91□□□□□ -0.82
RBM39-237ENST00000492779 MIER1Q8N108 512 aa9.91□□□□□ -0.82
RBM39-237ENST00000492779 KANK4Q5T7N3 995 aaPredicted RBP9.9□□□□□ -0.82
RBM39-237ENST00000492779 RIMBP3CA6NJZ7 1639 aa9.89□□□□□ -0.83
RBM39-237ENST00000492779 RIMBP3BA6NNM3 1639 aa9.89□□□□□ -0.83
RBM39-237ENST00000492779 RIMBP3Q9UFD9 1639 aa9.89□□□□□ -0.83
RBM39-237ENST00000492779 VPS8Q8N3P4 1428 aa9.88□□□□□ -0.83
RBM39-237ENST00000492779 EFCAB5A4FU69 1503 aa9.87□□□□□ -0.83
RBM39-237ENST00000492779 ZNF316A6NFI3 1004 aaPredicted RBP9.87□□□□□ -0.83
RBM39-237ENST00000492779 PCF11O94913 1555 aaKnown RBP9.86□□□□□ -0.83
RBM39-237ENST00000492779 CDK13Q14004 1512 aaKnown RBP9.85□□□□□ -0.83
RBM39-237ENST00000492779 FMN1Q68DA7 1419 aa9.84□□□□□ -0.83
RBM39-237ENST00000492779 NUP153P49790 1475 aaKnown RBP9.84□□□□□ -0.83
RBM39-237ENST00000492779 UACAQ9BZF9 1416 aa9.83□□□□□ -0.84
RBM39-237ENST00000492779 KCNH8Q96L42 1107 aa9.83□□□□□ -0.84
RBM39-237ENST00000492779 LRRIQ1Q96JM4 1722 aa9.82□□□□□ -0.84
RBM39-237ENST00000492779 CASKIN1Q8WXD9 1431 aa9.81□□□□□ -0.84
RBM39-237ENST00000492779 ATP10BO94823 1461 aa9.81□□□□□ -0.84
RBM39-237ENST00000492779 ABCA8O94911 1581 aa9.8□□□□□ -0.84
RBM39-237ENST00000492779 ADCY10Q96PN6 1610 aa9.8□□□□□ -0.84
RBM39-237ENST00000492779 APLP2Q06481 763 aa9.8□□□□□ -0.84
RBM39-237ENST00000492779 EPRSP07814 1512 aaKnown RBP9.8□□□□□ -0.84
RBM39-237ENST00000492779 RAPGEF6Q8TEU7 1601 aa9.8□□□□□ -0.84
RBM39-237ENST00000492779 MAGI3Q5TCQ9 1506 aa9.79□□□□□ -0.84
RBM39-237ENST00000492779 ABCC2Q92887 1545 aa9.77□□□□□ -0.85
RBM39-237ENST00000492779 FYCO1Q9BQS8 1478 aa9.77□□□□□ -0.85
RBM39-237ENST00000492779 PRKCSHP14314 528 aaPredicted RBP9.77□□□□□ -0.85
RBM39-237ENST00000492779 CENPBP07199 599 aaPredicted RBP9.76□□□□□ -0.85
RBM39-237ENST00000492779 NPM1P06748 294 aaKnown RBP eCLIP9.75□□□□□ -0.85
RBM39-237ENST00000492779 PLEKHD1A6NEE1 506 aa9.74□□□□□ -0.85
RBM39-237ENST00000492779 MTUS2Q5JR59 1369 aa9.74□□□□□ -0.85
RBM39-237ENST00000492779 TIAM1Q13009 1591 aa9.74□□□□□ -0.85
RBM39-237ENST00000492779 HECW1Q76N89 1606 aa9.73□□□□□ -0.85
RBM39-237ENST00000492779 KDM5BQ9UGL1 1544 aa9.73□□□□□ -0.85
RBM39-237ENST00000492779 SLC4A1APQ9BWU0 796 aaKnown RBP9.73□□□□□ -0.85
RBM39-237ENST00000492779 ASXL2Q76L83 1435 aa9.72□□□□□ -0.85
RBM39-237ENST00000492779 ZCCHC11Q5TAX3 1644 aaKnown RBP9.72□□□□□ -0.85
RBM39-237ENST00000492779 LRRC9Q6ZRR7 1453 aa9.72□□□□□ -0.85
RBM39-237ENST00000492779 UHRF1BP1LA0JNW5 1464 aa9.71□□□□□ -0.85
RBM39-237ENST00000492779 PHLDB1Q86UU1 1377 aa9.71□□□□□ -0.86
RBM39-237ENST00000492779 ZNF644Q9H582 1327 aaPredicted RBP9.7□□□□□ -0.86
RBM39-237ENST00000492779 DHX57Q6P158 1386 aaKnown RBP9.7□□□□□ -0.86
RBM39-237ENST00000492779 KIF14Q15058 1648 aa9.7□□□□□ -0.86
RBM39-237ENST00000492779 ZNF777Q9ULD5 760 aaPredicted RBP9.7□□□□□ -0.86
RBM39-237ENST00000492779 TRHP20396 242 aaPredicted RBP9.69□□□□□ -0.86
RBM39-237ENST00000492779 ITGAEP38570 1179 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms