RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-219ENST00000492602 PBRM1Q86U86 1689 aa10.38□□□□□ -0.75
SEC13-219ENST00000492602 GRIN2AQ12879 1464 aa10.37□□□□□ -0.75
SEC13-219ENST00000492602 NUP160Q12769 1436 aa10.36□□□□□ -0.75
SEC13-219ENST00000492602 PRG4Q92954 1404 aaPredicted RBP10.35□□□□□ -0.75
SEC13-219ENST00000492602 SHROOM2Q13796 1616 aa10.34□□□□□ -0.75
SEC13-219ENST00000492602 JPH4Q96JJ6 628 aa10.31□□□□□ -0.76
SEC13-219ENST00000492602 CHIC1Q5VXU3 224 aa10.3□□□□□ -0.76
SEC13-219ENST00000492602 CUX1P39880 1505 aa10.29□□□□□ -0.76
SEC13-219ENST00000492602 ADCY10Q96PN6 1610 aa10.27□□□□□ -0.77
SEC13-219ENST00000492602 ABCA5Q8WWZ7 1642 aa10.26□□□□□ -0.77
SEC13-219ENST00000492602 COL17A1Q9UMD9 1497 aaPredicted RBP10.26□□□□□ -0.77
SEC13-219ENST00000492602 ABCA10Q8WWZ4 1543 aa10.25□□□□□ -0.77
SEC13-219ENST00000492602 ADAMTS12P58397 1594 aa10.25□□□□□ -0.77
SEC13-219ENST00000492602 TOP2BQ02880 1626 aa10.24□□□□□ -0.77
SEC13-219ENST00000492602 FHAD1B1AJZ9 1412 aa10.24□□□□□ -0.77
SEC13-219ENST00000492602 PPRC1Q5VV67 1664 aaKnown RBP10.21□□□□□ -0.78
SEC13-219ENST00000492602 CERKQ8TCT0 537 aa10.2□□□□□ -0.78
SEC13-219ENST00000492602 TTBK1Q5TCY1 1321 aaPredicted RBP10.17□□□□□ -0.78
SEC13-219ENST00000492602 ASXL2Q76L83 1435 aa10.16□□□□□ -0.78
SEC13-219ENST00000492602 GLI2P10070 1586 aa10.16□□□□□ -0.78
SEC13-219ENST00000492602 SPATA31D1Q6ZQQ2 1576 aa10.16□□□□□ -0.78
SEC13-219ENST00000492602 PLB1Q6P1J6 1458 aa10.15□□□□□ -0.78
SEC13-219ENST00000492602 TEX14Q8IWB6 1497 aa10.14□□□□□ -0.79
SEC13-219ENST00000492602 PTPRMP28827 1452 aa10.12□□□□□ -0.79
SEC13-219ENST00000492602 RUSC2Q8N2Y8 1516 aa10.12□□□□□ -0.79
SEC13-219ENST00000492602 PTPRGP23470 1445 aa10.11□□□□□ -0.79
SEC13-219ENST00000492602 WRNQ14191 1432 aaPredicted RBP eCLIP10.11□□□□□ -0.79
SEC13-219ENST00000492602 ABCC2Q92887 1545 aa10.11□□□□□ -0.79
SEC13-219ENST00000492602 PCF11O94913 1555 aaKnown RBP10.1□□□□□ -0.79
SEC13-219ENST00000492602 ERICH3Q5RHP9 1530 aa10.1□□□□□ -0.79
SEC13-219ENST00000492602 HSPA2P54652 639 aa10.09□□□□□ -0.79
SEC13-219ENST00000492602 EPRSP07814 1512 aaKnown RBP10.08□□□□□ -0.8
SEC13-219ENST00000492602 KIF21BO75037 1637 aa10.07□□□□□ -0.8
SEC13-219ENST00000492602 MAP3K4Q9Y6R4 1608 aa10.07□□□□□ -0.8
SEC13-219ENST00000492602 CUL7Q14999 1698 aa10.04□□□□□ -0.8
SEC13-219ENST00000492602 KIAA0586Q9BVV6 1533 aa10.03□□□□□ -0.8
SEC13-219ENST00000492602 TNIKQ9UKE5 1360 aa10.01□□□□□ -0.81
SEC13-219ENST00000492602 PLPPR3Q6T4P5 718 aa10.01□□□□□ -0.81
SEC13-219ENST00000492602 ADAMTSL3P82987 1691 aa10.01□□□□□ -0.81
SEC13-219ENST00000492602 ARID4BQ4LE39 1312 aaPredicted RBP10□□□□□ -0.81
SEC13-219ENST00000492602 UACAQ9BZF9 1416 aa9.99□□□□□ -0.81
SEC13-219ENST00000492602 UHRF1BP1LA0JNW5 1464 aa9.99□□□□□ -0.81
SEC13-219ENST00000492602 CD109Q6YHK3 1445 aa9.99□□□□□ -0.81
SEC13-219ENST00000492602 CARMIL2Q6F5E8 1435 aa9.98□□□□□ -0.81
SEC13-219ENST00000492602 KDM5BQ9UGL1 1544 aa9.97□□□□□ -0.81
SEC13-219ENST00000492602 KCNH8Q96L42 1107 aa9.96□□□□□ -0.82
SEC13-219ENST00000492602 MAGI3Q5TCQ9 1506 aa9.96□□□□□ -0.82
SEC13-219ENST00000492602 MADDQ8WXG6 1647 aa9.96□□□□□ -0.82
SEC13-219ENST00000492602 WDR7Q9Y4E6 1490 aa9.94□□□□□ -0.82
SEC13-219ENST00000492602 BCORL1Q5H9F3 1711 aa9.93□□□□□ -0.82
SEC13-219ENST00000492602 ZCCHC11Q5TAX3 1644 aaKnown RBP9.93□□□□□ -0.82
SEC13-219ENST00000492602 DMRT2Q9Y5R5 561 aa9.91□□□□□ -0.82
SEC13-219ENST00000492602 BIVM-ERCC5R4GMW8 1640 aa9.91□□□□□ -0.82
SEC13-219ENST00000492602 RIMS1Q86UR5 1692 aaKnown RBP9.9□□□□□ -0.82
SEC13-219ENST00000492602 RAPGEF3O95398 923 aa9.9□□□□□ -0.82
SEC13-219ENST00000492602 ARAP3Q8WWN8 1544 aa9.9□□□□□ -0.82
SEC13-219ENST00000492602 CFAP43Q8NDM7 1665 aa9.9□□□□□ -0.83
SEC13-219ENST00000492602 YEATS2Q9ULM3 1422 aa9.87□□□□□ -0.83
SEC13-219ENST00000492602 IGF1RP08069 1367 aa9.86□□□□□ -0.83
SEC13-219ENST00000492602 DISP1Q96F81 1524 aa9.84□□□□□ -0.83
SEC13-219ENST00000492602 MLECQ14165 292 aa9.82□□□□□ -0.84
SEC13-219ENST00000492602 PHLDB1Q86UU1 1377 aa9.82□□□□□ -0.84
SEC13-219ENST00000492602 IQGAP2Q13576 1575 aa9.82□□□□□ -0.84
SEC13-219ENST00000492602 UBAP1LF5GYI3 381 aa9.81□□□□□ -0.84
SEC13-219ENST00000492602 POGZQ7Z3K3 1410 aa9.8□□□□□ -0.84
SEC13-219ENST00000492602 IQSEC2Q5JU85 1478 aa9.79□□□□□ -0.84
SEC13-219ENST00000492602 CARMIL1Q5VZK9 1371 aa9.79□□□□□ -0.84
SEC13-219ENST00000492602 STRCQ7RTU9 1775 aa9.79□□□□□ -0.84
SEC13-219ENST00000492602 PHF23Q9BUL5 403 aaPredicted RBP9.79□□□□□ -0.84
SEC13-219ENST00000492602 PTPRTO14522 1441 aa9.78□□□□□ -0.84
SEC13-219ENST00000492602 LTBP4Q8N2S1 1624 aa9.78□□□□□ -0.84
SEC13-219ENST00000492602 MED1Q15648 1581 aaPredicted RBP9.77□□□□□ -0.85
SEC13-219ENST00000492602 KIF27Q86VH2 1401 aa9.77□□□□□ -0.85
SEC13-219ENST00000492602 CEBPAP49715 358 aaPredicted RBP9.77□□□□□ -0.85
SEC13-219ENST00000492602 FANCAO15360 1455 aa9.76□□□□□ -0.85
SEC13-219ENST00000492602 FRMPD1Q5SYB0 1578 aa9.75□□□□□ -0.85
SEC13-219ENST00000492602 PREX1Q8TCU6 1659 aa9.75□□□□□ -0.85
SEC13-219ENST00000492602 ARID3CA6NKF2 412 aa9.75□□□□□ -0.85
SEC13-219ENST00000492602 ARHGEF40Q8TER5 1519 aa9.75□□□□□ -0.85
SEC13-219ENST00000492602 KIAA0556O60303 1618 aa9.74□□□□□ -0.85
SEC13-219ENST00000492602 NEO1Q92859 1461 aa9.74□□□□□ -0.85
SEC13-219ENST00000492602 UHRF1BP1Q6BDS2 1440 aa9.73□□□□□ -0.85
SEC13-219ENST00000492602 AKNAQ7Z591 1439 aa9.73□□□□□ -0.85
SEC13-219ENST00000492602 UGGT2Q9NYU1 1516 aa9.73□□□□□ -0.85
SEC13-219ENST00000492602 TTC37Q6PGP7 1564 aa9.73□□□□□ -0.85
SEC13-219ENST00000492602 HSPA1LP34931 641 aa9.73□□□□□ -0.85
SEC13-219ENST00000492602 SCAF1Q9H7N4 1312 aaKnown RBP9.73□□□□□ -0.85
SEC13-219ENST00000492602 FER1L4A9Z1Z3 1794 aa9.71□□□□□ -0.85
SEC13-219ENST00000492602 DENND4BO75064 1496 aaPredicted RBP9.7□□□□□ -0.86
SEC13-219ENST00000492602 ABCA8O94911 1581 aa9.69□□□□□ -0.86
SEC13-219ENST00000492602 PIP4K2BP78356 416 aa9.69□□□□□ -0.86
SEC13-219ENST00000492602 ABCA9Q8IUA7 1624 aa9.69□□□□□ -0.86
SEC13-219ENST00000492602 SIGLEC1Q9BZZ2 1709 aa9.68□□□□□ -0.86
SEC13-219ENST00000492602 ZNF335Q9H4Z2 1342 aaPredicted RBP9.68□□□□□ -0.86
SEC13-219ENST00000492602 ZFYVE16Q7Z3T8 1539 aa9.66□□□□□ -0.86
SEC13-219ENST00000492602 FHOD3Q2V2M9 1422 aa9.66□□□□□ -0.86
SEC13-219ENST00000492602 EFCAB5A4FU69 1503 aa9.65□□□□□ -0.86
SEC13-219ENST00000492602 ARHGEF12Q9NZN5 1544 aa9.65□□□□□ -0.86
SEC13-219ENST00000492602 ATP10BO94823 1461 aa9.65□□□□□ -0.87
SEC13-219ENST00000492602 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms