RNA–Protein interactions for RNA: ENST00000492468.5

PABPC4-216, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 2

Gene PABPC4, Length 2,257 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-216ENST00000492468 PABPN1Q86U42 306 aaKnown RBP eCLIP20.96■□□□□ 0.95
PABPC4-216ENST00000492468 ITGAEP38570 1179 aa20.94■□□□□ 0.94
PABPC4-216ENST00000492468 KIF27Q86VH2 1401 aa20.94■□□□□ 0.94
PABPC4-216ENST00000492468 CUX1P39880 1505 aa20.93■□□□□ 0.94
PABPC4-216ENST00000492468 TIMELESSQ9UNS1 1208 aa20.91■□□□□ 0.94
PABPC4-216ENST00000492468 MSH5O43196 834 aa20.9■□□□□ 0.94
PABPC4-216ENST00000492468 TRIM52Q96A61 297 aa20.86■□□□□ 0.93
PABPC4-216ENST00000492468 SIN3AQ96ST3 1273 aa20.86■□□□□ 0.93
PABPC4-216ENST00000492468 LRRC9Q6ZRR7 1453 aa20.85■□□□□ 0.93
PABPC4-216ENST00000492468 FANCIQ9NVI1 1328 aa20.85■□□□□ 0.93
PABPC4-216ENST00000492468 ANP32CO43423 234 aa20.84■□□□□ 0.93
PABPC4-216ENST00000492468 CFAP43Q8NDM7 1665 aa20.83■□□□□ 0.93
PABPC4-216ENST00000492468 PHLDB1Q86UU1 1377 aa20.82■□□□□ 0.92
PABPC4-216ENST00000492468 HIRIP3Q9BW71 556 aaPredicted RBP20.73■□□□□ 0.91
PABPC4-216ENST00000492468 PCF11O94913 1555 aaKnown RBP20.7■□□□□ 0.9
PABPC4-216ENST00000492468 HMGXB3Q12766 1538 aa20.69■□□□□ 0.9
PABPC4-216ENST00000492468 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.68■□□□□ 0.9
PABPC4-216ENST00000492468 FAM50AQ14320 339 aaKnown RBP20.67■□□□□ 0.9
PABPC4-216ENST00000492468 CDK11AQ9UQ88 783 aaPredicted RBP20.67■□□□□ 0.9
PABPC4-216ENST00000492468 FHAD1B1AJZ9 1412 aa20.67■□□□□ 0.9
PABPC4-216ENST00000492468 IGF1RP08069 1367 aa20.64■□□□□ 0.89
PABPC4-216ENST00000492468 CFTRP13569 1480 aa20.63■□□□□ 0.89
PABPC4-216ENST00000492468 PRDM2Q13029 1718 aa20.62■□□□□ 0.89
PABPC4-216ENST00000492468 ERICH6BQ5W0A0 696 aa20.62■□□□□ 0.89
PABPC4-216ENST00000492468 ERICH6Q7L0X2 663 aa20.62■□□□□ 0.89
PABPC4-216ENST00000492468 MYT1LQ9UL68 1186 aa20.62■□□□□ 0.89
PABPC4-216ENST00000492468 TONSLQ96HA7 1378 aa20.62■□□□□ 0.89
PABPC4-216ENST00000492468 HNRNPUQ00839 825 aaKnown RBP eCLIP20.59■□□□□ 0.89
PABPC4-216ENST00000492468 NCAPD3P42695 1498 aa20.59■□□□□ 0.89
PABPC4-216ENST00000492468 KDM5BQ9UGL1 1544 aa20.58■□□□□ 0.89
PABPC4-216ENST00000492468 CCDC18Q5T9S5 1454 aa20.56■□□□□ 0.88
PABPC4-216ENST00000492468 FYCO1Q9BQS8 1478 aa20.56■□□□□ 0.88
PABPC4-216ENST00000492468 IRX6P78412 446 aaPredicted RBP20.56■□□□□ 0.88
PABPC4-216ENST00000492468 CARMIL1Q5VZK9 1371 aa20.55■□□□□ 0.88
PABPC4-216ENST00000492468 UACAQ9BZF9 1416 aa20.54■□□□□ 0.88
PABPC4-216ENST00000492468 PTPN23Q9H3S7 1636 aa20.53■□□□□ 0.88
PABPC4-216ENST00000492468 PPP4R2Q9NY27 417 aa20.53■□□□□ 0.88
PABPC4-216ENST00000492468 HFM1A2PYH4 1435 aa20.51■□□□□ 0.87
PABPC4-216ENST00000492468 AQRO60306 1485 aaKnown RBP eCLIP20.51■□□□□ 0.877e-8■■■■■ 32.7
PABPC4-216ENST00000492468 FGD5Q6ZNL6 1462 aa20.5■□□□□ 0.87
PABPC4-216ENST00000492468 FGD6Q6ZV73 1430 aa20.5■□□□□ 0.87
PABPC4-216ENST00000492468 CASKIN1Q8WXD9 1431 aa20.49■□□□□ 0.87
PABPC4-216ENST00000492468 NCOA2Q15596 1464 aa20.49■□□□□ 0.87
PABPC4-216ENST00000492468 EFCAB5A4FU69 1503 aa20.48■□□□□ 0.87
PABPC4-216ENST00000492468 DEKP35659 375 aaKnown RBP20.44■□□□□ 0.86
PABPC4-216ENST00000492468 PTPRKQ15262 1439 aa20.44■□□□□ 0.86
PABPC4-216ENST00000492468 FHOD3Q2V2M9 1422 aa20.44■□□□□ 0.86
PABPC4-216ENST00000492468 WASHC2AQ641Q2 1341 aa20.43■□□□□ 0.86
PABPC4-216ENST00000492468 CNTLNQ9NXG0 1405 aa20.41■□□□□ 0.86
PABPC4-216ENST00000492468 NAIPQ13075 1403 aa20.4■□□□□ 0.86
PABPC4-216ENST00000492468 HSPA5P11021 654 aaKnown RBP20.36■□□□□ 0.85
PABPC4-216ENST00000492468 P3H3Q8IVL6 736 aa20.36■□□□□ 0.85
PABPC4-216ENST00000492468 CTTNBP2Q8WZ74 1663 aa20.36■□□□□ 0.85
PABPC4-216ENST00000492468 SNAPC4Q5SXM2 1469 aa20.36■□□□□ 0.85
PABPC4-216ENST00000492468 ZBED9Q6R2W3 1325 aa20.35■□□□□ 0.85
PABPC4-216ENST00000492468 HECW1Q76N89 1606 aa20.35■□□□□ 0.85
PABPC4-216ENST00000492468 CCDC184Q52MB2 194 aa20.34■□□□□ 0.85
PABPC4-216ENST00000492468 NOP58Q9Y2X3 529 aaKnown RBP20.34■□□□□ 0.85
PABPC4-216ENST00000492468 B4GALNT3Q6L9W6 998 aa20.34■□□□□ 0.85
PABPC4-216ENST00000492468 ATP1B4Q9UN42 357 aaPredicted RBP20.34■□□□□ 0.85
PABPC4-216ENST00000492468 FMN1Q68DA7 1419 aa20.33■□□□□ 0.84
PABPC4-216ENST00000492468 LRRIQ1Q96JM4 1722 aa20.31■□□□□ 0.84
PABPC4-216ENST00000492468 GCC2Q8IWJ2 1684 aa20.31■□□□□ 0.84
PABPC4-216ENST00000492468 NCOA1Q15788 1441 aa20.3■□□□□ 0.84
PABPC4-216ENST00000492468 DENND4BO75064 1496 aaPredicted RBP20.3■□□□□ 0.84
PABPC4-216ENST00000492468 MYOM3Q5VTT5 1437 aa20.29■□□□□ 0.84
PABPC4-216ENST00000492468 PRKRIP1Q9H875 184 aaPredicted RBP20.28■□□□□ 0.84
PABPC4-216ENST00000492468 CC2D2AQ9P2K1 1620 aa20.28■□□□□ 0.84
PABPC4-216ENST00000492468 POLR1AO95602 1720 aaPredicted RBP20.28■□□□□ 0.84
PABPC4-216ENST00000492468 EIF4G2P78344 907 aaKnown RBP eCLIP20.27■□□□□ 0.84
PABPC4-216ENST00000492468 CUL7Q14999 1698 aa20.27■□□□□ 0.84
PABPC4-216ENST00000492468 MTUS2Q5JR59 1369 aa20.27■□□□□ 0.84
PABPC4-216ENST00000492468 ABCA5Q8WWZ7 1642 aa20.26■□□□□ 0.83
PABPC4-216ENST00000492468 SUPT6HQ7KZ85 1726 aaKnown RBP20.26■□□□□ 0.83
PABPC4-216ENST00000492468 CCDC7Q96M83 1385 aa20.26■□□□□ 0.83
PABPC4-216ENST00000492468 PAK3O75914 559 aaPredicted RBP20.25■□□□□ 0.83
PABPC4-216ENST00000492468 THOC2Q8NI27 1593 aaKnown RBP20.23■□□□□ 0.83
PABPC4-216ENST00000492468 EHBP1L1Q8N3D4 1523 aa20.22■□□□□ 0.83
PABPC4-216ENST00000492468 FAM9BQ8IZU0 186 aa20.22■□□□□ 0.83
PABPC4-216ENST00000492468 MRS2Q9HD23 443 aa20.22■□□□□ 0.83
PABPC4-216ENST00000492468 CADPSQ9ULU8 1353 aa20.22■□□□□ 0.83
PABPC4-216ENST00000492468 SAMD9Q5K651 1589 aa20.21■□□□□ 0.83
PABPC4-216ENST00000492468 SMG6Q86US8 1419 aaKnown RBP20.21■□□□□ 0.83
PABPC4-216ENST00000492468 ARHGEF11O15085 1522 aa20.2■□□□□ 0.82
PABPC4-216ENST00000492468 AKNAQ7Z591 1439 aa20.2■□□□□ 0.82
PABPC4-216ENST00000492468 ABCA10Q8WWZ4 1543 aa20.2■□□□□ 0.82
PABPC4-216ENST00000492468 UGGT2Q9NYU1 1516 aa20.2■□□□□ 0.82
PABPC4-216ENST00000492468 PRKCSHP14314 528 aaPredicted RBP20.2■□□□□ 0.82
PABPC4-216ENST00000492468 C11orf95C9JLR9 678 aaPredicted RBP20.19■□□□□ 0.82
PABPC4-216ENST00000492468 GRIN2BQ13224 1484 aa20.19■□□□□ 0.82
PABPC4-216ENST00000492468 NBR1Q14596 966 aa20.19■□□□□ 0.82
PABPC4-216ENST00000492468 TCOF1Q13428 1488 aaKnown RBP20.18■□□□□ 0.82
PABPC4-216ENST00000492468 RNF123Q5XPI4 1314 aa20.17■□□□□ 0.82
PABPC4-216ENST00000492468 KDM6BO15054 1643 aa20.17■□□□□ 0.82
PABPC4-216ENST00000492468 IPO9Q96P70 1041 aaKnown RBP20.15■□□□□ 0.82
PABPC4-216ENST00000492468 DNMBPQ6XZF7 1577 aa20.13■□□□□ 0.81
PABPC4-216ENST00000492468 ANP32AP39687 249 aaKnown RBP20.12■□□□□ 0.81
PABPC4-216ENST00000492468 SPATA31E1Q6ZUB1 1445 aa20.12■□□□□ 0.81
PABPC4-216ENST00000492468 KIF21AQ7Z4S6 1674 aa20.11■□□□□ 0.81
PABPC4-216ENST00000492468 RAD54L2Q9Y4B4 1467 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms