RNA–Protein interactions for RNA: ENST00000492395.5

ZSWIM8-212, Transcript of zinc finger SWIM-type containing 8, humanhuman

TSL 1 (best)

Gene ZSWIM8, Length 4,490 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM8-212ENST00000492395 FGD5Q6ZNL6 1462 aa17.39■□□□□ 0.37
ZSWIM8-212ENST00000492395 DNAJC5BQ9UF47 199 aa17.38■□□□□ 0.37
ZSWIM8-212ENST00000492395 NESP48681 1621 aa17.38■□□□□ 0.37
ZSWIM8-212ENST00000492395 HMGXB3Q12766 1538 aa17.37■□□□□ 0.37
ZSWIM8-212ENST00000492395 RRP7BPQ9NSQ0 103 aa17.36■□□□□ 0.37
ZSWIM8-212ENST00000492395 RAD54L2Q9Y4B4 1467 aa17.36■□□□□ 0.37
ZSWIM8-212ENST00000492395 FHAD1B1AJZ9 1412 aa17.35■□□□□ 0.37
ZSWIM8-212ENST00000492395 DAXXQ9UER7 740 aaPredicted RBP17.33■□□□□ 0.37
ZSWIM8-212ENST00000492395 IGF1RP08069 1367 aa17.32■□□□□ 0.36
ZSWIM8-212ENST00000492395 KCNH8Q96L42 1107 aa17.29■□□□□ 0.36
ZSWIM8-212ENST00000492395 PLEKHD1A6NEE1 506 aa17.29■□□□□ 0.36
ZSWIM8-212ENST00000492395 FHOD3Q2V2M9 1422 aa17.28■□□□□ 0.36
ZSWIM8-212ENST00000492395 CCNB3Q8WWL7 1395 aa17.28■□□□□ 0.36
ZSWIM8-212ENST00000492395 TONSLQ96HA7 1378 aa17.28■□□□□ 0.36
ZSWIM8-212ENST00000492395 PEG3Q9GZU2 1588 aa17.25■□□□□ 0.35
ZSWIM8-212ENST00000492395 NPM1P06748 294 aaKnown RBP eCLIP17.25■□□□□ 0.35
ZSWIM8-212ENST00000492395 SCAF1Q9H7N4 1312 aaKnown RBP17.25■□□□□ 0.35
ZSWIM8-212ENST00000492395 TSPY4P0CV99 314 aa17.24■□□□□ 0.35
ZSWIM8-212ENST00000492395 TSPY10P0CW01 314 aa17.24■□□□□ 0.35
ZSWIM8-212ENST00000492395 CUX1P39880 1505 aa17.23■□□□□ 0.35
ZSWIM8-212ENST00000492395 CFDP1Q9UEE9 299 aaPredicted RBP17.22■□□□□ 0.35
ZSWIM8-212ENST00000492395 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.21■□□□□ 0.355e-7■□□□□ 11.2
ZSWIM8-212ENST00000492395 DDX10Q13206 875 aaKnown RBP17.19■□□□□ 0.34
ZSWIM8-212ENST00000492395 TOP2BQ02880 1626 aa17.18■□□□□ 0.34
ZSWIM8-212ENST00000492395 HIRIP3Q9BW71 556 aaPredicted RBP17.18■□□□□ 0.34
ZSWIM8-212ENST00000492395 MIER1Q8N108 512 aa17.18■□□□□ 0.34
ZSWIM8-212ENST00000492395 GAPVD1Q14C86 1478 aa17.18■□□□□ 0.34
ZSWIM8-212ENST00000492395 FMN1Q68DA7 1419 aa17.16■□□□□ 0.34
ZSWIM8-212ENST00000492395 AQRO60306 1485 aaKnown RBP eCLIP17.14■□□□□ 0.333e-7■■■■□ 20.5
ZSWIM8-212ENST00000492395 SIN3AQ96ST3 1273 aa17.14■□□□□ 0.33
ZSWIM8-212ENST00000492395 ESF1Q9H501 851 aaKnown RBP17.14■□□□□ 0.33
ZSWIM8-212ENST00000492395 CLSPNQ9HAW4 1339 aa17.12■□□□□ 0.33
ZSWIM8-212ENST00000492395 RTL5Q5HYW3 569 aaPredicted RBP17.12■□□□□ 0.33
ZSWIM8-212ENST00000492395 TOPBP1Q92547 1522 aa17.11■□□□□ 0.33
ZSWIM8-212ENST00000492395 FKBP8Q14318 412 aa17.1■□□□□ 0.33
ZSWIM8-212ENST00000492395 ARHGAP35Q9NRY4 1499 aa17.1■□□□□ 0.33
ZSWIM8-212ENST00000492395 POLA1P09884 1462 aaPredicted RBP17.1■□□□□ 0.33
ZSWIM8-212ENST00000492395 KIF21BO75037 1637 aa17.09■□□□□ 0.33
ZSWIM8-212ENST00000492395 JPH4Q96JJ6 628 aa17.08■□□□□ 0.33
ZSWIM8-212ENST00000492395 PRXQ9BXM0 1461 aa17.08■□□□□ 0.32
ZSWIM8-212ENST00000492395 CARMIL2Q6F5E8 1435 aa17.06■□□□□ 0.32
ZSWIM8-212ENST00000492395 KDM2AQ9Y2K7 1162 aa17.05■□□□□ 0.32
ZSWIM8-212ENST00000492395 ARAP1Q96P48 1450 aa17.03■□□□□ 0.32
ZSWIM8-212ENST00000492395 HNRNPUQ00839 825 aaKnown RBP eCLIP17.02■□□□□ 0.32
ZSWIM8-212ENST00000492395 CHGAP10645 457 aaKnown RBP17.02■□□□□ 0.32
ZSWIM8-212ENST00000492395 ERICH3Q5RHP9 1530 aa17.01■□□□□ 0.31
ZSWIM8-212ENST00000492395 RAB3GAP2Q9H2M9 1393 aa17.01■□□□□ 0.31
ZSWIM8-212ENST00000492395 SETD5Q9C0A6 1442 aa17■□□□□ 0.31
ZSWIM8-212ENST00000492395 DNMBPQ6XZF7 1577 aa16.97■□□□□ 0.31
ZSWIM8-212ENST00000492395 PLPPR3Q6T4P5 718 aa16.96■□□□□ 0.3
ZSWIM8-212ENST00000492395 FAM9BQ8IZU0 186 aa16.96■□□□□ 0.3
ZSWIM8-212ENST00000492395 MRC2Q9UBG0 1479 aa16.95■□□□□ 0.3
ZSWIM8-212ENST00000492395 RGL3Q3MIN7 710 aa16.94■□□□□ 0.3
ZSWIM8-212ENST00000492395 FOXD1Q16676 465 aa16.93■□□□□ 0.3
ZSWIM8-212ENST00000492395 LAMC3Q9Y6N6 1575 aa16.92■□□□□ 0.3
ZSWIM8-212ENST00000492395 GRIN2BQ13224 1484 aa16.91■□□□□ 0.3
ZSWIM8-212ENST00000492395 STAG3Q9UJ98 1225 aa16.91■□□□□ 0.3
ZSWIM8-212ENST00000492395 EIF4G2P78344 907 aaKnown RBP eCLIP16.88■□□□□ 0.29
ZSWIM8-212ENST00000492395 ABCA10Q8WWZ4 1543 aa16.87■□□□□ 0.29
ZSWIM8-212ENST00000492395 PHLDB1Q86UU1 1377 aa16.87■□□□□ 0.29
ZSWIM8-212ENST00000492395 URB2Q14146 1524 aaKnown RBP16.87■□□□□ 0.29
ZSWIM8-212ENST00000492395 SENP3Q9H4L4 574 aaPredicted RBP16.86■□□□□ 0.29
ZSWIM8-212ENST00000492395 CCDC18Q5T9S5 1454 aa16.84■□□□□ 0.29
ZSWIM8-212ENST00000492395 SALL2Q9Y467 1007 aaPredicted RBP16.84■□□□□ 0.29
ZSWIM8-212ENST00000492395 BIVM-ERCC5R4GMW8 1640 aa16.84■□□□□ 0.29
ZSWIM8-212ENST00000492395 SLC24A1O60721 1099 aa16.84■□□□□ 0.29
ZSWIM8-212ENST00000492395 PTPRGP23470 1445 aa16.83■□□□□ 0.28
ZSWIM8-212ENST00000492395 IFT140Q96RY7 1462 aa16.83■□□□□ 0.28
ZSWIM8-212ENST00000492395 LRRC9Q6ZRR7 1453 aa16.83■□□□□ 0.28
ZSWIM8-212ENST00000492395 HNRNPMP52272 730 aaKnown RBP eCLIP16.82■□□□□ 0.28
ZSWIM8-212ENST00000492395 DHX57Q6P158 1386 aaKnown RBP16.82■□□□□ 0.28
ZSWIM8-212ENST00000492395 MRS2Q9HD23 443 aa16.81■□□□□ 0.28
ZSWIM8-212ENST00000492395 IRX6P78412 446 aaPredicted RBP16.8■□□□□ 0.28
ZSWIM8-212ENST00000492395 ANP32AP39687 249 aaKnown RBP16.8■□□□□ 0.28
ZSWIM8-212ENST00000492395 CASKIN1Q8WXD9 1431 aa16.8■□□□□ 0.28
ZSWIM8-212ENST00000492395 NEFMP07197 916 aa16.8■□□□□ 0.28
ZSWIM8-212ENST00000492395 NPM2Q86SE8 214 aaKnown RBP16.8■□□□□ 0.28
ZSWIM8-212ENST00000492395 MPHOSPH9Q99550 1183 aa16.79■□□□□ 0.28
ZSWIM8-212ENST00000492395 SNAPC4Q5SXM2 1469 aa16.78■□□□□ 0.28
ZSWIM8-212ENST00000492395 PKD2Q13563 968 aa16.78■□□□□ 0.28
ZSWIM8-212ENST00000492395 ZNF644Q9H582 1327 aaPredicted RBP16.77■□□□□ 0.28
ZSWIM8-212ENST00000492395 CANXP27824 592 aaKnown RBP16.77■□□□□ 0.28
ZSWIM8-212ENST00000492395 TMC1Q8TDI8 760 aa16.76■□□□□ 0.27
ZSWIM8-212ENST00000492395 EFCAB2Q5VUJ9 269 aa16.74■□□□□ 0.27
ZSWIM8-212ENST00000492395 FGD6Q6ZV73 1430 aa16.74■□□□□ 0.27
ZSWIM8-212ENST00000492395 BCL11AQ9H165 835 aa16.73■□□□□ 0.27
ZSWIM8-212ENST00000492395 ZNF608Q9ULD9 1512 aaPredicted RBP16.72■□□□□ 0.27
ZSWIM8-212ENST00000492395 CARD11Q9BXL7 1154 aa16.72■□□□□ 0.27
ZSWIM8-212ENST00000492395 NUP155O75694 1391 aa16.72■□□□□ 0.27
ZSWIM8-212ENST00000492395 PRDM2Q13029 1718 aa16.72■□□□□ 0.27
ZSWIM8-212ENST00000492395 ANKRD30AQ9BXX3 1397 aa16.72■□□□□ 0.27
ZSWIM8-212ENST00000492395 FYCO1Q9BQS8 1478 aa16.72■□□□□ 0.27
ZSWIM8-212ENST00000492395 TIMELESSQ9UNS1 1208 aa16.72■□□□□ 0.27
ZSWIM8-212ENST00000492395 DCAF11Q8TEB1 546 aa16.71■□□□□ 0.27
ZSWIM8-212ENST00000492395 CCDC136Q96JN2 1154 aa16.7■□□□□ 0.26
ZSWIM8-212ENST00000492395 MYOM3Q5VTT5 1437 aa16.7■□□□□ 0.26
ZSWIM8-212ENST00000492395 EFCAB5A4FU69 1503 aa16.7■□□□□ 0.26
ZSWIM8-212ENST00000492395 NCOA2Q15596 1464 aa16.7■□□□□ 0.26
ZSWIM8-212ENST00000492395 PPP1R15AO75807 674 aaPredicted RBP16.68■□□□□ 0.26
ZSWIM8-212ENST00000492395 ZBTB47Q9UFB7 747 aaPredicted RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms