RNA–Protein interactions for RNA: ENST00000492233.5

ATPAF1-206, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 3

Gene ATPAF1, Length 429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-206ENST00000492233 FAM9AQ8IZU1 332 aaPredicted RBP5.82□□□□□ -1.48
ATPAF1-206ENST00000492233 PABPN1Q86U42 306 aaKnown RBP eCLIP5.81□□□□□ -1.48
ATPAF1-206ENST00000492233 DNAJC5BQ9UF47 199 aa5.8□□□□□ -1.48
ATPAF1-206ENST00000492233 EEA1Q15075 1411 aa5.8□□□□□ -1.48
ATPAF1-206ENST00000492233 ATAD2BQ9ULI0 1458 aa5.79□□□□□ -1.48
ATPAF1-206ENST00000492233 CACNB1Q02641 598 aaPredicted RBP5.78□□□□□ -1.48
ATPAF1-206ENST00000492233 CCDC9Q9Y3X0 531 aaKnown RBP5.78□□□□□ -1.48
ATPAF1-206ENST00000492233 ABCC8Q09428 1581 aa5.77□□□□□ -1.49
ATPAF1-206ENST00000492233 VASPP50552 380 aaPredicted RBP5.77□□□□□ -1.49
ATPAF1-206ENST00000492233 IFNLR1Q8IU57 520 aaPredicted RBP5.76□□□□□ -1.49
ATPAF1-206ENST00000492233 WRNQ14191 1432 aaPredicted RBP eCLIP5.75□□□□□ -1.49
ATPAF1-206ENST00000492233 ZEB1P37275 1124 aaPredicted RBP5.75□□□□□ -1.49
ATPAF1-206ENST00000492233 DNAJC5Q9H3Z4 198 aa5.75□□□□□ -1.49
ATPAF1-206ENST00000492233 TNIKQ9UKE5 1360 aa5.75□□□□□ -1.49
ATPAF1-206ENST00000492233 BAZ1BQ9UIG0 1483 aaKnown RBP5.75□□□□□ -1.49
ATPAF1-206ENST00000492233 SOGA1O94964 1423 aa5.74□□□□□ -1.49
ATPAF1-206ENST00000492233 ZBTB7CA1YPR0 619 aa5.73□□□□□ -1.49
ATPAF1-206ENST00000492233 PPARGC1BQ86YN6 1023 aaKnown RBP5.73□□□□□ -1.49
ATPAF1-206ENST00000492233 ECM2O94769 699 aaPredicted RBP5.72□□□□□ -1.49
ATPAF1-206ENST00000492233 MYCNP04198 464 aaPredicted RBP5.72□□□□□ -1.49
ATPAF1-206ENST00000492233 ARID3AQ99856 593 aa5.72□□□□□ -1.49
ATPAF1-206ENST00000492233 CEP162Q5TB80 1403 aa5.72□□□□□ -1.49
ATPAF1-206ENST00000492233 NCAPD3P42695 1498 aa5.71□□□□□ -1.49
ATPAF1-206ENST00000492233 GOLGA3Q08378 1498 aa5.71□□□□□ -1.5
ATPAF1-206ENST00000492233 HMGXB3Q12766 1538 aa5.7□□□□□ -1.5
ATPAF1-206ENST00000492233 RUSC2Q8N2Y8 1516 aa5.7□□□□□ -1.5
ATPAF1-206ENST00000492233 HMGB1P09429 215 aaKnown RBP5.7□□□□□ -1.5
ATPAF1-206ENST00000492233 RNF39Q9H2S5 420 aa5.7□□□□□ -1.5
ATPAF1-206ENST00000492233 SYNJ1O43426 1573 aa5.69□□□□□ -1.5
ATPAF1-206ENST00000492233 SLC4A2P04920 1241 aa5.69□□□□□ -1.5
ATPAF1-206ENST00000492233 CDK11BP21127 795 aaKnown RBP5.69□□□□□ -1.5
ATPAF1-206ENST00000492233 BRPF1P55201 1214 aaPredicted RBP5.69□□□□□ -1.5
ATPAF1-206ENST00000492233 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.69□□□□□ -1.5
ATPAF1-206ENST00000492233 CDK11AQ9UQ88 783 aaPredicted RBP5.69□□□□□ -1.5
ATPAF1-206ENST00000492233 CEP164Q9UPV0 1460 aa5.69□□□□□ -1.5
ATPAF1-206ENST00000492233 ZMYND15Q9H091 742 aa5.68□□□□□ -1.5
ATPAF1-206ENST00000492233 RSPH6AQ9H0K4 717 aa5.68□□□□□ -1.5
ATPAF1-206ENST00000492233 KIF21BO75037 1637 aa5.67□□□□□ -1.5
ATPAF1-206ENST00000492233 PDIA4P13667 645 aaKnown RBP5.66□□□□□ -1.5
ATPAF1-206ENST00000492233 PLEKHG5O94827 1062 aa5.65□□□□□ -1.5
ATPAF1-206ENST00000492233 TOP2BQ02880 1626 aa5.65□□□□□ -1.51
ATPAF1-206ENST00000492233 NEUROD2Q15784 382 aa5.64□□□□□ -1.51
ATPAF1-206ENST00000492233 CFTRP13569 1480 aa5.64□□□□□ -1.51
ATPAF1-206ENST00000492233 BIVM-ERCC5R4GMW8 1640 aa5.63□□□□□ -1.51
ATPAF1-206ENST00000492233 IGSF3O75054 1194 aa5.63□□□□□ -1.51
ATPAF1-206ENST00000492233 TRHP20396 242 aaPredicted RBP5.63□□□□□ -1.51
ATPAF1-206ENST00000492233 RGL2O15211 777 aa5.62□□□□□ -1.51
ATPAF1-206ENST00000492233 CHGAP10645 457 aaKnown RBP5.62□□□□□ -1.51
ATPAF1-206ENST00000492233 HSP90B1P14625 803 aaKnown RBP5.62□□□□□ -1.51
ATPAF1-206ENST00000492233 CLIP1P30622 1438 aa5.62□□□□□ -1.51
ATPAF1-206ENST00000492233 PRXQ9BXM0 1461 aa5.62□□□□□ -1.51
ATPAF1-206ENST00000492233 C1QBPQ07021 282 aaKnown RBP5.61□□□□□ -1.51
ATPAF1-206ENST00000492233 ERICH3Q5RHP9 1530 aa5.61□□□□□ -1.51
ATPAF1-206ENST00000492233 VPS8Q8N3P4 1428 aa5.61□□□□□ -1.51
ATPAF1-206ENST00000492233 RAPGEF2Q9Y4G8 1499 aa5.61□□□□□ -1.51
ATPAF1-206ENST00000492233 CUX1P39880 1505 aa5.6□□□□□ -1.51
ATPAF1-206ENST00000492233 SPDYE4A6NLX3 237 aa5.59□□□□□ -1.51
ATPAF1-206ENST00000492233 NECTIN2Q92692 538 aa5.59□□□□□ -1.51
ATPAF1-206ENST00000492233 CHMP4AQ9BY43 222 aa5.59□□□□□ -1.51
ATPAF1-206ENST00000492233 KIF27Q86VH2 1401 aa5.58□□□□□ -1.52
ATPAF1-206ENST00000492233 CADPSQ9ULU8 1353 aa5.58□□□□□ -1.52
ATPAF1-206ENST00000492233 LMOD2Q6P5Q4 547 aa5.58□□□□□ -1.52
ATPAF1-206ENST00000492233 U3KPZ7 1027 aaPredicted RBP5.58□□□□□ -1.52
ATPAF1-206ENST00000492233 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.57□□□□□ -1.52
ATPAF1-206ENST00000492233 CCER1Q8TC90 406 aaPredicted RBP5.57□□□□□ -1.52
ATPAF1-206ENST00000492233 SPOCK2Q92563 424 aa5.57□□□□□ -1.52
ATPAF1-206ENST00000492233 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.55□□□□□ -1.52
ATPAF1-206ENST00000492233 PUS7Q96PZ0 661 aaKnown RBP5.55□□□□□ -1.52
ATPAF1-206ENST00000492233 C1orf115Q9H7X2 142 aa5.55□□□□□ -1.52
ATPAF1-206ENST00000492233 ARAP1Q96P48 1450 aa5.55□□□□□ -1.52
ATPAF1-206ENST00000492233 RAD21O60216 631 aa5.54□□□□□ -1.52
ATPAF1-206ENST00000492233 KCTD17Q8N5Z5 321 aa5.54□□□□□ -1.52
ATPAF1-206ENST00000492233 ATF5Q9Y2D1 282 aaPredicted RBP5.54□□□□□ -1.52
ATPAF1-206ENST00000492233 IGF1RP08069 1367 aa5.54□□□□□ -1.52
ATPAF1-206ENST00000492233 SAMD1Q6SPF0 538 aaPredicted RBP5.53□□□□□ -1.52
ATPAF1-206ENST00000492233 PRDM2Q13029 1718 aa5.53□□□□□ -1.52
ATPAF1-206ENST00000492233 ARID3CA6NKF2 412 aa5.52□□□□□ -1.53
ATPAF1-206ENST00000492233 APBB1O00213 710 aa5.52□□□□□ -1.53
ATPAF1-206ENST00000492233 PROM2Q8N271 834 aa5.52□□□□□ -1.53
ATPAF1-206ENST00000492233 CC2D2AQ9P2K1 1620 aa5.52□□□□□ -1.53
ATPAF1-206ENST00000492233 CUX2O14529 1486 aa5.51□□□□□ -1.53
ATPAF1-206ENST00000492233 FGD5Q6ZNL6 1462 aa5.51□□□□□ -1.53
ATPAF1-206ENST00000492233 ARHGAP35Q9NRY4 1499 aa5.51□□□□□ -1.53
ATPAF1-206ENST00000492233 SLC24A3Q9HC58 644 aa5.5□□□□□ -1.53
ATPAF1-206ENST00000492233 FANCD2Q9BXW9 1451 aa5.5□□□□□ -1.53
ATPAF1-206ENST00000492233 RRBP1Q9P2E9 1410 aaKnown RBP5.49□□□□□ -1.53
ATPAF1-206ENST00000492233 SPINK5Q9NQ38 1064 aaPredicted RBP5.49□□□□□ -1.53
ATPAF1-206ENST00000492233 CARMIL1Q5VZK9 1371 aa5.49□□□□□ -1.53
ATPAF1-206ENST00000492233 MAP3K1Q13233 1512 aa5.48□□□□□ -1.53
ATPAF1-206ENST00000492233 CAPN15O75808 1086 aa5.48□□□□□ -1.53
ATPAF1-206ENST00000492233 RBM25P49756 843 aaKnown RBP5.48□□□□□ -1.53
ATPAF1-206ENST00000492233 RGS22Q8NE09 1264 aa5.48□□□□□ -1.53
ATPAF1-206ENST00000492233 ABCA10Q8WWZ4 1543 aa5.48□□□□□ -1.53
ATPAF1-206ENST00000492233 CLSPNQ9HAW4 1339 aa5.48□□□□□ -1.53
ATPAF1-206ENST00000492233 DNMBPQ6XZF7 1577 aa5.47□□□□□ -1.53
ATPAF1-206ENST00000492233 BRD2P25440 801 aaKnown RBP5.47□□□□□ -1.53
ATPAF1-206ENST00000492233 HNRNPUL2Q1KMD3 747 aaKnown RBP5.47□□□□□ -1.53
ATPAF1-206ENST00000492233 MTMR7Q9Y216 660 aa5.47□□□□□ -1.53
ATPAF1-206ENST00000492233 TOPBP1Q92547 1522 aa5.47□□□□□ -1.53
ATPAF1-206ENST00000492233 KANK4Q5T7N3 995 aaPredicted RBP5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms