RNA–Protein interactions for RNA: ENST00000491944.1

SCN5A-213, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 1 (best)

Gene SCN5A, Length 1,382 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-213ENST00000491944 CTTNBP2Q8WZ74 1663 aa38.21■■■■□ 3.71
SCN5A-213ENST00000491944 EHMT2Q96KQ7 1210 aa38.19■■■■□ 3.7
SCN5A-213ENST00000491944 IQGAP2Q13576 1575 aa38.17■■■■□ 3.7
SCN5A-213ENST00000491944 SHROOM2Q13796 1616 aa38.17■■■■□ 3.7
SCN5A-213ENST00000491944 GOLGA3Q08378 1498 aa38.14■■■■□ 3.7
SCN5A-213ENST00000491944 ARHGEF11O15085 1522 aa38.14■■■■□ 3.7
SCN5A-213ENST00000491944 JPH4Q96JJ6 628 aa38.12■■■■□ 3.69
SCN5A-213ENST00000491944 RIMBP3CA6NJZ7 1639 aa38.11■■■■□ 3.69
SCN5A-213ENST00000491944 RIMBP3BA6NNM3 1639 aa38.11■■■■□ 3.69
SCN5A-213ENST00000491944 RIMBP3Q9UFD9 1639 aa38.11■■■■□ 3.69
SCN5A-213ENST00000491944 PRG4Q92954 1404 aaPredicted RBP38.03■■■■□ 3.68
SCN5A-213ENST00000491944 UBTFP17480 764 aaKnown RBP38.02■■■■□ 3.68
SCN5A-213ENST00000491944 ERCC6L2Q5T890 1561 aa38.01■■■■□ 3.67
SCN5A-213ENST00000491944 UGGT2Q9NYU1 1516 aa37.94■■■■□ 3.66
SCN5A-213ENST00000491944 CARMIL2Q6F5E8 1435 aa37.87■■■■□ 3.65
SCN5A-213ENST00000491944 ARAP1Q96P48 1450 aa37.86■■■■□ 3.65
SCN5A-213ENST00000491944 DISP1Q96F81 1524 aa37.83■■■■□ 3.65
SCN5A-213ENST00000491944 RANGAP1P46060 587 aaPredicted RBP37.82■■■■□ 3.65
SCN5A-213ENST00000491944 KIAA0556O60303 1618 aa37.8■■■■□ 3.64
SCN5A-213ENST00000491944 CYB5RLQ6IPT4 315 aa37.76■■■■□ 3.64
SCN5A-213ENST00000491944 LOC105371045A0A1W2PR82 267 aa37.72■■■■□ 3.63
SCN5A-213ENST00000491944 TNIKQ9UKE5 1360 aa37.71■■■■□ 3.63
SCN5A-213ENST00000491944 SAMD9Q5K651 1589 aa37.7■■■■□ 3.63
SCN5A-213ENST00000491944 TTBK1Q5TCY1 1321 aaPredicted RBP37.69■■■■□ 3.62
SCN5A-213ENST00000491944 P3H3Q8IVL6 736 aa37.65■■■■□ 3.62
SCN5A-213ENST00000491944 PTPRGP23470 1445 aa37.63■■■■□ 3.62
SCN5A-213ENST00000491944 EFCAB5A4FU69 1503 aa37.62■■■■□ 3.61
SCN5A-213ENST00000491944 FHOD3Q2V2M9 1422 aa37.53■■■■□ 3.6
SCN5A-213ENST00000491944 ARHGAP35Q9NRY4 1499 aa37.51■■■■□ 3.6
SCN5A-213ENST00000491944 CLIP1P30622 1438 aa37.47■■■■□ 3.59
SCN5A-213ENST00000491944 CEP162Q5TB80 1403 aa37.43■■■■□ 3.58
SCN5A-213ENST00000491944 ADCY10Q96PN6 1610 aa37.4■■■■□ 3.58
SCN5A-213ENST00000491944 UACAQ9BZF9 1416 aa37.39■■■■□ 3.58
SCN5A-213ENST00000491944 PLB1Q6P1J6 1458 aa37.37■■■■□ 3.57
SCN5A-213ENST00000491944 ABCC2Q92887 1545 aa37.34■■■■□ 3.57
SCN5A-213ENST00000491944 ABCA8O94911 1581 aa37.33■■■■□ 3.57
SCN5A-213ENST00000491944 UHRF1BP1LA0JNW5 1464 aa37.31■■■■□ 3.56
SCN5A-213ENST00000491944 FMN1Q68DA7 1419 aa37.27■■■■□ 3.56
SCN5A-213ENST00000491944 RAPGEF6Q8TEU7 1601 aa37.27■■■■□ 3.56
SCN5A-213ENST00000491944 NPM1P06748 294 aaKnown RBP eCLIP37.23■■■■□ 3.55
SCN5A-213ENST00000491944 KDM5BQ9UGL1 1544 aa37.14■■■■□ 3.54
SCN5A-213ENST00000491944 ZCCHC11Q5TAX3 1644 aaKnown RBP37.13■■■■□ 3.53
SCN5A-213ENST00000491944 ARID3CA6NKF2 412 aa37.11■■■■□ 3.53
SCN5A-213ENST00000491944 NUP153P49790 1475 aaKnown RBP37.1■■■■□ 3.53
SCN5A-213ENST00000491944 ATP1B4Q9UN42 357 aaPredicted RBP37.08■■■■□ 3.53
SCN5A-213ENST00000491944 PCF11O94913 1555 aaKnown RBP37.07■■■■□ 3.53
SCN5A-213ENST00000491944 HECW1Q76N89 1606 aa37.07■■■■□ 3.52
SCN5A-213ENST00000491944 MAPKBP1O60336 1514 aa37.03■■■■□ 3.52
SCN5A-213ENST00000491944 CASKIN1Q8WXD9 1431 aa37.02■■■■□ 3.52
SCN5A-213ENST00000491944 ATP10BO94823 1461 aa37.02■■■■□ 3.52
SCN5A-213ENST00000491944 FYCO1Q9BQS8 1478 aa36.98■■■■□ 3.51
SCN5A-213ENST00000491944 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.98■■■■□ 3.51
SCN5A-213ENST00000491944 HNRNPUL2Q1KMD3 747 aaKnown RBP36.98■■■■□ 3.51
SCN5A-213ENST00000491944 ASXL2Q76L83 1435 aa36.95■■■■□ 3.51
SCN5A-213ENST00000491944 CDK13Q14004 1512 aaKnown RBP36.93■■■■□ 3.5
SCN5A-213ENST00000491944 EPRSP07814 1512 aaKnown RBP36.93■■■■□ 3.5
SCN5A-213ENST00000491944 LRRIQ1Q96JM4 1722 aa36.92■■■■□ 3.5
SCN5A-213ENST00000491944 VPS8Q8N3P4 1428 aa36.92■■■■□ 3.5
SCN5A-213ENST00000491944 TRHP20396 242 aaPredicted RBP36.86■■■■□ 3.49
SCN5A-213ENST00000491944 WDR7Q9Y4E6 1490 aa36.85■■■■□ 3.49
SCN5A-213ENST00000491944 CCDC18Q5T9S5 1454 aa36.84■■■■□ 3.49
SCN5A-213ENST00000491944 ABCC10Q5T3U5 1492 aa36.79■■■■□ 3.48
SCN5A-213ENST00000491944 DIP2BQ9P265 1576 aa36.78■■■■□ 3.48
SCN5A-213ENST00000491944 KIF13AQ9H1H9 1805 aa36.77■■■■□ 3.48
SCN5A-213ENST00000491944 PLEKHD1A6NEE1 506 aa36.75■■■■□ 3.47
SCN5A-213ENST00000491944 FAM69CQ0P6D2 419 aa36.73■■■■□ 3.47
SCN5A-213ENST00000491944 KCNH8Q96L42 1107 aa36.73■■■■□ 3.47
SCN5A-213ENST00000491944 CDK11AQ9UQ88 783 aaPredicted RBP36.72■■■■□ 3.47
SCN5A-213ENST00000491944 GLI2P10070 1586 aa36.65■■■■□ 3.46
SCN5A-213ENST00000491944 CFAP43Q8NDM7 1665 aa36.64■■■■□ 3.46
SCN5A-213ENST00000491944 TROQ12816 1431 aaPredicted RBP36.6■■■■□ 3.45
SCN5A-213ENST00000491944 TIAM1Q13009 1591 aa36.59■■■■□ 3.45
SCN5A-213ENST00000491944 MAGI3Q5TCQ9 1506 aa36.59■■■■□ 3.45
SCN5A-213ENST00000491944 APLP2Q06481 763 aa36.54■■■■□ 3.44
SCN5A-213ENST00000491944 TSPOAP1O95153 1857 aa36.54■■■■□ 3.44
SCN5A-213ENST00000491944 KIF14Q15058 1648 aa36.53■■■■□ 3.44
SCN5A-213ENST00000491944 MAP3K4Q9Y6R4 1608 aa36.53■■■■□ 3.44
SCN5A-213ENST00000491944 MTUS2Q5JR59 1369 aa36.53■■■■□ 3.44
SCN5A-213ENST00000491944 ABCA9Q8IUA7 1624 aa36.52■■■■□ 3.44
SCN5A-213ENST00000491944 MAP3K1Q13233 1512 aa36.51■■■■□ 3.43
SCN5A-213ENST00000491944 EHBP1L1Q8N3D4 1523 aa36.48■■■■□ 3.43
SCN5A-213ENST00000491944 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP36.48■■■■□ 3.43
SCN5A-213ENST00000491944 TTC37Q6PGP7 1564 aa36.46■■■■□ 3.43
SCN5A-213ENST00000491944 CD109Q6YHK3 1445 aa36.46■■■■□ 3.43
SCN5A-213ENST00000491944 LRRC9Q6ZRR7 1453 aa36.41■■■■□ 3.42
SCN5A-213ENST00000491944 PPRC1Q5VV67 1664 aaKnown RBP36.4■■■■□ 3.42
SCN5A-213ENST00000491944 KANK4Q5T7N3 995 aaPredicted RBP36.36■■■■□ 3.41
SCN5A-213ENST00000491944 SUPT6HQ7KZ85 1726 aaKnown RBP36.33■■■■□ 3.41
SCN5A-213ENST00000491944 MYO5CQ9NQX4 1742 aa36.33■■■■□ 3.41
SCN5A-213ENST00000491944 TEX14Q8IWB6 1497 aa36.33■■■■□ 3.41
SCN5A-213ENST00000491944 NCOA2Q15596 1464 aa36.25■■■■□ 3.39
SCN5A-213ENST00000491944 PLCH2O75038 1416 aa36.24■■■■□ 3.39
SCN5A-213ENST00000491944 CDC42BPAQ5VT25 1732 aa36.24■■■■□ 3.39
SCN5A-213ENST00000491944 PREX2Q70Z35 1606 aa36.22■■■■□ 3.39
SCN5A-213ENST00000491944 CCNB3Q8WWL7 1395 aa36.22■■■■□ 3.39
SCN5A-213ENST00000491944 ARHGAP5Q13017 1502 aa36.19■■■■□ 3.38
SCN5A-213ENST00000491944 ARAP3Q8WWN8 1544 aa36.19■■■■□ 3.38
SCN5A-213ENST00000491944 CDC42BPBQ9Y5S2 1711 aa36.19■■■■□ 3.38
SCN5A-213ENST00000491944 FANCAO15360 1455 aa36.18■■■■□ 3.38
SCN5A-213ENST00000491944 CFAP74Q9C0B2 1584 aa36.18■■■■□ 3.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms