RNA–Protein interactions for RNA: ENST00000491829.5

GABBR1-218, Transcript of gamma-aminobutyric acid type B receptor subunit 1, humanhuman

TSL 5

Gene GABBR1, Length 4,212 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABBR1-218ENST00000491829 POLR3GLQ9BT43 218 aa20.26■□□□□ 0.83
GABBR1-218ENST00000491829 ARAP1Q96P48 1450 aa20.25■□□□□ 0.83
GABBR1-218ENST00000491829 SIN3AQ96ST3 1273 aa20.24■□□□□ 0.83
GABBR1-218ENST00000491829 CCNB3Q8WWL7 1395 aa20.22■□□□□ 0.83
GABBR1-218ENST00000491829 PRXQ9BXM0 1461 aa20.21■□□□□ 0.83
GABBR1-218ENST00000491829 MYT1LQ9UL68 1186 aa20.19■□□□□ 0.82
GABBR1-218ENST00000491829 MIER1Q8N108 512 aa20.18■□□□□ 0.82
GABBR1-218ENST00000491829 ZNF326Q5BKZ1 582 aaKnown RBP20.16■□□□□ 0.82
GABBR1-218ENST00000491829 AQRO60306 1485 aaKnown RBP eCLIP20.14■□□□□ 0.829e-7■■■■■ 29.9
GABBR1-218ENST00000491829 POLA1P09884 1462 aaPredicted RBP20.13■□□□□ 0.81
GABBR1-218ENST00000491829 ARHGAP35Q9NRY4 1499 aa20.13■□□□□ 0.81
GABBR1-218ENST00000491829 TOPBP1Q92547 1522 aa20.12■□□□□ 0.81
GABBR1-218ENST00000491829 GTF3C3Q9Y5Q9 886 aa20.08■□□□□ 0.81
GABBR1-218ENST00000491829 FHAD1B1AJZ9 1412 aa20.08■□□□□ 0.8
GABBR1-218ENST00000491829 DDX10Q13206 875 aaKnown RBP20.06■□□□□ 0.8
GABBR1-218ENST00000491829 GAPVD1Q14C86 1478 aa20.06■□□□□ 0.8
GABBR1-218ENST00000491829 CDK11AQ9UQ88 783 aaPredicted RBP20.03■□□□□ 0.8
GABBR1-218ENST00000491829 RAB3GAP2Q9H2M9 1393 aa20.02■□□□□ 0.8
GABBR1-218ENST00000491829 ERICH3Q5RHP9 1530 aa20■□□□□ 0.79
GABBR1-218ENST00000491829 ACIN1Q9UKV3 1341 aaKnown RBP19.99■□□□□ 0.79
GABBR1-218ENST00000491829 BIVM-ERCC5R4GMW8 1640 aa19.99■□□□□ 0.79
GABBR1-218ENST00000491829 KCNH8Q96L42 1107 aa19.99■□□□□ 0.79
GABBR1-218ENST00000491829 FOXD1Q16676 465 aa19.98■□□□□ 0.79
GABBR1-218ENST00000491829 PHLDB1Q86UU1 1377 aa19.98■□□□□ 0.79
GABBR1-218ENST00000491829 SCAF1Q9H7N4 1312 aaKnown RBP19.97■□□□□ 0.79
GABBR1-218ENST00000491829 TONSLQ96HA7 1378 aa19.96■□□□□ 0.79
GABBR1-218ENST00000491829 URB2Q14146 1524 aaKnown RBP19.95■□□□□ 0.78
GABBR1-218ENST00000491829 DHX57Q6P158 1386 aaKnown RBP19.93■□□□□ 0.78
GABBR1-218ENST00000491829 DNMBPQ6XZF7 1577 aa19.91■□□□□ 0.78
GABBR1-218ENST00000491829 CFDP1Q9UEE9 299 aaPredicted RBP19.9■□□□□ 0.78
GABBR1-218ENST00000491829 FMN1Q68DA7 1419 aa19.9■□□□□ 0.78
GABBR1-218ENST00000491829 SETD5Q9C0A6 1442 aa19.88■□□□□ 0.77
GABBR1-218ENST00000491829 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.88■□□□□ 0.77
GABBR1-218ENST00000491829 PLEKHD1A6NEE1 506 aa19.86■□□□□ 0.77
GABBR1-218ENST00000491829 JPH4Q96JJ6 628 aa19.84■□□□□ 0.77
GABBR1-218ENST00000491829 SLC4A1APQ9BWU0 796 aaKnown RBP19.84■□□□□ 0.77
GABBR1-218ENST00000491829 ABCA10Q8WWZ4 1543 aa19.83■□□□□ 0.76
GABBR1-218ENST00000491829 LRRC9Q6ZRR7 1453 aa19.82■□□□□ 0.76
GABBR1-218ENST00000491829 ZNF644Q9H582 1327 aaPredicted RBP19.82■□□□□ 0.76
GABBR1-218ENST00000491829 BCANQ96GW7 911 aa19.8■□□□□ 0.76
GABBR1-218ENST00000491829 KDM2AQ9Y2K7 1162 aa19.8■□□□□ 0.76
GABBR1-218ENST00000491829 ZNF608Q9ULD9 1512 aaPredicted RBP19.78■□□□□ 0.76
GABBR1-218ENST00000491829 ANP32CO43423 234 aa19.77■□□□□ 0.75
GABBR1-218ENST00000491829 LAMC3Q9Y6N6 1575 aa19.77■□□□□ 0.75
GABBR1-218ENST00000491829 TSPY4P0CV99 314 aa19.76■□□□□ 0.75
GABBR1-218ENST00000491829 TSPY10P0CW01 314 aa19.76■□□□□ 0.75
GABBR1-218ENST00000491829 SENP3-EIF4A1A0A087X0R7 540 aa19.74■□□□□ 0.75
GABBR1-218ENST00000491829 MRC2Q9UBG0 1479 aa19.72■□□□□ 0.75
GABBR1-218ENST00000491829 CLSPNQ9HAW4 1339 aa19.7■□□□□ 0.74
GABBR1-218ENST00000491829 RRBP1Q9P2E9 1410 aaKnown RBP19.69■□□□□ 0.74
GABBR1-218ENST00000491829 CASKIN1Q8WXD9 1431 aa19.68■□□□□ 0.74
GABBR1-218ENST00000491829 SENP3Q9H4L4 574 aaPredicted RBP19.68■□□□□ 0.74
GABBR1-218ENST00000491829 PCF11O94913 1555 aaKnown RBP19.68■□□□□ 0.74
GABBR1-218ENST00000491829 TIAM1Q13009 1591 aa19.68■□□□□ 0.74
GABBR1-218ENST00000491829 GRIN2BQ13224 1484 aa19.67■□□□□ 0.74
GABBR1-218ENST00000491829 RGL3Q3MIN7 710 aa19.67■□□□□ 0.74
GABBR1-218ENST00000491829 FGD6Q6ZV73 1430 aa19.65■□□□□ 0.74
GABBR1-218ENST00000491829 SNAPC4Q5SXM2 1469 aa19.65■□□□□ 0.74
GABBR1-218ENST00000491829 HNRNPMP52272 730 aaKnown RBP eCLIP19.64■□□□□ 0.73
GABBR1-218ENST00000491829 NEFLP07196 543 aa19.63■□□□□ 0.73
GABBR1-218ENST00000491829 MPHOSPH9Q99550 1183 aa19.62■□□□□ 0.73
GABBR1-218ENST00000491829 NCOA2Q15596 1464 aa19.61■□□□□ 0.73
GABBR1-218ENST00000491829 KIF21AQ7Z4S6 1674 aa19.61■□□□□ 0.73
GABBR1-218ENST00000491829 PRDM2Q13029 1718 aa19.6■□□□□ 0.73
GABBR1-218ENST00000491829 PPP1R15AO75807 674 aaPredicted RBP19.59■□□□□ 0.73
GABBR1-218ENST00000491829 CARMIL2Q6F5E8 1435 aa19.59■□□□□ 0.73
GABBR1-218ENST00000491829 CDK13Q14004 1512 aaKnown RBP19.59■□□□□ 0.73
GABBR1-218ENST00000491829 FYCO1Q9BQS8 1478 aa19.58■□□□□ 0.72
GABBR1-218ENST00000491829 MYOM3Q5VTT5 1437 aa19.55■□□□□ 0.72
GABBR1-218ENST00000491829 FAM9BQ8IZU0 186 aa19.55■□□□□ 0.72
GABBR1-218ENST00000491829 IFT140Q96RY7 1462 aa19.54■□□□□ 0.72
GABBR1-218ENST00000491829 PELP1Q8IZL8 1130 aaKnown RBP19.54■□□□□ 0.72
GABBR1-218ENST00000491829 EIF4G2P78344 907 aaKnown RBP eCLIP19.54■□□□□ 0.72
GABBR1-218ENST00000491829 PKD2Q13563 968 aa19.54■□□□□ 0.72
GABBR1-218ENST00000491829 CCDC18Q5T9S5 1454 aa19.54■□□□□ 0.72
GABBR1-218ENST00000491829 L3MBTL2Q969R5 705 aa19.53■□□□□ 0.72
GABBR1-218ENST00000491829 PRG4Q92954 1404 aaPredicted RBP19.51■□□□□ 0.71
GABBR1-218ENST00000491829 CHGAP10645 457 aaKnown RBP19.51■□□□□ 0.71
GABBR1-218ENST00000491829 HNRNPUQ00839 825 aaKnown RBP eCLIP19.5■□□□□ 0.71
GABBR1-218ENST00000491829 EFCAB5A4FU69 1503 aa19.5■□□□□ 0.71
GABBR1-218ENST00000491829 NPM1P06748 294 aaKnown RBP eCLIP19.48■□□□□ 0.71
GABBR1-218ENST00000491829 HSPA5P11021 654 aaKnown RBP19.48■□□□□ 0.71
GABBR1-218ENST00000491829 PTPRGP23470 1445 aa19.48■□□□□ 0.71
GABBR1-218ENST00000491829 CUL7Q14999 1698 aa19.48■□□□□ 0.71
GABBR1-218ENST00000491829 PLB1Q6P1J6 1458 aa19.45■□□□□ 0.7
GABBR1-218ENST00000491829 SALL2Q9Y467 1007 aaPredicted RBP19.45■□□□□ 0.7
GABBR1-218ENST00000491829 IQGAP2Q13576 1575 aa19.43■□□□□ 0.7
GABBR1-218ENST00000491829 IRX6P78412 446 aaPredicted RBP19.43■□□□□ 0.7
GABBR1-218ENST00000491829 DCAF11Q8TEB1 546 aa19.42■□□□□ 0.7
GABBR1-218ENST00000491829 NUP155O75694 1391 aa19.42■□□□□ 0.7
GABBR1-218ENST00000491829 PTPRKQ15262 1439 aa19.42■□□□□ 0.7
GABBR1-218ENST00000491829 EPRSP07814 1512 aaKnown RBP19.42■□□□□ 0.7
GABBR1-218ENST00000491829 FKBP8Q14318 412 aa19.41■□□□□ 0.7
GABBR1-218ENST00000491829 GRIN2AQ12879 1464 aa19.38■□□□□ 0.69
GABBR1-218ENST00000491829 KIAA0586Q9BVV6 1533 aa19.38■□□□□ 0.69
GABBR1-218ENST00000491829 MRS2Q9HD23 443 aa19.37■□□□□ 0.69
GABBR1-218ENST00000491829 CARD11Q9BXL7 1154 aa19.36■□□□□ 0.69
GABBR1-218ENST00000491829 PLPPR3Q6T4P5 718 aa19.34■□□□□ 0.69
GABBR1-218ENST00000491829 NAIPQ13075 1403 aa19.33■□□□□ 0.69
GABBR1-218ENST00000491829 TIMELESSQ9UNS1 1208 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms