RNA–Protein interactions for RNA: ENST00000491544.1

PCYT1A-216, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 3

Gene PCYT1A, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-216ENST00000491544 PBRM1Q86U86 1689 aa18.95■□□□□ 0.62
PCYT1A-216ENST00000491544 NPM1P06748 294 aaKnown RBP eCLIP18.95■□□□□ 0.62
PCYT1A-216ENST00000491544 NUP160Q12769 1436 aa18.94■□□□□ 0.62
PCYT1A-216ENST00000491544 GRIN2AQ12879 1464 aa18.94■□□□□ 0.62
PCYT1A-216ENST00000491544 SPATA31D1Q6ZQQ2 1576 aa18.93■□□□□ 0.62
PCYT1A-216ENST00000491544 TOP2BQ02880 1626 aa18.86■□□□□ 0.61
PCYT1A-216ENST00000491544 ADCY10Q96PN6 1610 aa18.86■□□□□ 0.61
PCYT1A-216ENST00000491544 PRG4Q92954 1404 aaPredicted RBP18.86■□□□□ 0.61
PCYT1A-216ENST00000491544 COL17A1Q9UMD9 1497 aaPredicted RBP18.84■□□□□ 0.61
PCYT1A-216ENST00000491544 PPRC1Q5VV67 1664 aaKnown RBP18.82■□□□□ 0.6
PCYT1A-216ENST00000491544 ABCA5Q8WWZ7 1642 aa18.77■□□□□ 0.6
PCYT1A-216ENST00000491544 CERKQ8TCT0 537 aa18.75■□□□□ 0.59
PCYT1A-216ENST00000491544 ADAMTS12P58397 1594 aa18.75■□□□□ 0.59
PCYT1A-216ENST00000491544 CUX1P39880 1505 aa18.72■□□□□ 0.59
PCYT1A-216ENST00000491544 JPH4Q96JJ6 628 aa18.68■□□□□ 0.58
PCYT1A-216ENST00000491544 ABCA10Q8WWZ4 1543 aa18.67■□□□□ 0.58
PCYT1A-216ENST00000491544 GLI2P10070 1586 aa18.67■□□□□ 0.58
PCYT1A-216ENST00000491544 PCF11O94913 1555 aaKnown RBP18.66■□□□□ 0.58
PCYT1A-216ENST00000491544 FHAD1B1AJZ9 1412 aa18.61■□□□□ 0.57
PCYT1A-216ENST00000491544 PTPRMP28827 1452 aa18.6■□□□□ 0.57
PCYT1A-216ENST00000491544 TEX14Q8IWB6 1497 aa18.56■□□□□ 0.56
PCYT1A-216ENST00000491544 ASXL2Q76L83 1435 aa18.56■□□□□ 0.56
PCYT1A-216ENST00000491544 PLB1Q6P1J6 1458 aa18.54■□□□□ 0.56
PCYT1A-216ENST00000491544 SUPT5HO00267 1087 aaKnown RBP18.54■□□□□ 0.56
PCYT1A-216ENST00000491544 RUSC2Q8N2Y8 1516 aa18.53■□□□□ 0.56
PCYT1A-216ENST00000491544 KIF21BO75037 1637 aa18.52■□□□□ 0.56
PCYT1A-216ENST00000491544 MAP3K4Q9Y6R4 1608 aa18.52■□□□□ 0.55
PCYT1A-216ENST00000491544 ABCC2Q92887 1545 aa18.48■□□□□ 0.55
PCYT1A-216ENST00000491544 HSPA2P54652 639 aa18.46■□□□□ 0.55
PCYT1A-216ENST00000491544 ADAMTSL3P82987 1691 aa18.46■□□□□ 0.55
PCYT1A-216ENST00000491544 EPRSP07814 1512 aaKnown RBP18.45■□□□□ 0.54
PCYT1A-216ENST00000491544 ERICH3Q5RHP9 1530 aa18.39■□□□□ 0.53
PCYT1A-216ENST00000491544 KIAA0586Q9BVV6 1533 aa18.39■□□□□ 0.53
PCYT1A-216ENST00000491544 PTPRGP23470 1445 aa18.35■□□□□ 0.53
PCYT1A-216ENST00000491544 CUL7Q14999 1698 aa18.34■□□□□ 0.53
PCYT1A-216ENST00000491544 MADDQ8WXG6 1647 aa18.32■□□□□ 0.52
PCYT1A-216ENST00000491544 TTBK1Q5TCY1 1321 aaPredicted RBP18.27■□□□□ 0.52
PCYT1A-216ENST00000491544 WRNQ14191 1432 aaPredicted RBP eCLIP18.27■□□□□ 0.52
PCYT1A-216ENST00000491544 UHRF1BP1LA0JNW5 1464 aa18.26■□□□□ 0.51
PCYT1A-216ENST00000491544 BCORL1Q5H9F3 1711 aa18.25■□□□□ 0.51
PCYT1A-216ENST00000491544 MAGI3Q5TCQ9 1506 aa18.23■□□□□ 0.51
PCYT1A-216ENST00000491544 KDM5BQ9UGL1 1544 aa18.2■□□□□ 0.5
PCYT1A-216ENST00000491544 TNIKQ9UKE5 1360 aa18.19■□□□□ 0.5
PCYT1A-216ENST00000491544 RIMS1Q86UR5 1692 aaKnown RBP18.18■□□□□ 0.5
PCYT1A-216ENST00000491544 CD109Q6YHK3 1445 aa18.17■□□□□ 0.5
PCYT1A-216ENST00000491544 UACAQ9BZF9 1416 aa18.17■□□□□ 0.5
PCYT1A-216ENST00000491544 ZCCHC11Q5TAX3 1644 aaKnown RBP18.14■□□□□ 0.49
PCYT1A-216ENST00000491544 WDR7Q9Y4E6 1490 aa18.14■□□□□ 0.49
PCYT1A-216ENST00000491544 ARAP3Q8WWN8 1544 aa18.13■□□□□ 0.49
PCYT1A-216ENST00000491544 MED1Q15648 1581 aaPredicted RBP18.13■□□□□ 0.49
PCYT1A-216ENST00000491544 PLPPR3Q6T4P5 718 aa18.11■□□□□ 0.49
PCYT1A-216ENST00000491544 ARID4BQ4LE39 1312 aaPredicted RBP18.11■□□□□ 0.49
PCYT1A-216ENST00000491544 YEATS2Q9ULM3 1422 aa18.11■□□□□ 0.49
PCYT1A-216ENST00000491544 IQSEC2Q5JU85 1478 aa18.11■□□□□ 0.49
PCYT1A-216ENST00000491544 CFAP43Q8NDM7 1665 aa18.09■□□□□ 0.49
PCYT1A-216ENST00000491544 CARMIL2Q6F5E8 1435 aa18.08■□□□□ 0.49
PCYT1A-216ENST00000491544 DMRT2Q9Y5R5 561 aa18.08■□□□□ 0.48
PCYT1A-216ENST00000491544 LTBP4Q8N2S1 1624 aa18.06■□□□□ 0.48
PCYT1A-216ENST00000491544 STRCQ7RTU9 1775 aa18.04■□□□□ 0.48
PCYT1A-216ENST00000491544 BIVM-ERCC5R4GMW8 1640 aa17.99■□□□□ 0.47
PCYT1A-216ENST00000491544 RAPGEF3O95398 923 aa17.97■□□□□ 0.47
PCYT1A-216ENST00000491544 PTPRTO14522 1441 aa17.97■□□□□ 0.47
PCYT1A-216ENST00000491544 KCNH8Q96L42 1107 aa17.95■□□□□ 0.46
PCYT1A-216ENST00000491544 PREX1Q8TCU6 1659 aa17.94■□□□□ 0.46
PCYT1A-216ENST00000491544 UBAP1LF5GYI3 381 aa17.94■□□□□ 0.46
PCYT1A-216ENST00000491544 PHF23Q9BUL5 403 aaPredicted RBP17.93■□□□□ 0.46
PCYT1A-216ENST00000491544 FRMPD1Q5SYB0 1578 aa17.92■□□□□ 0.46
PCYT1A-216ENST00000491544 ARHGEF40Q8TER5 1519 aa17.92■□□□□ 0.46
PCYT1A-216ENST00000491544 DISP1Q96F81 1524 aa17.91■□□□□ 0.46
PCYT1A-216ENST00000491544 TTC37Q6PGP7 1564 aa17.91■□□□□ 0.46
PCYT1A-216ENST00000491544 PHLDB1Q86UU1 1377 aa17.9■□□□□ 0.46
PCYT1A-216ENST00000491544 POGZQ7Z3K3 1410 aa17.87■□□□□ 0.45
PCYT1A-216ENST00000491544 HSPA1LP34931 641 aa17.86■□□□□ 0.45
PCYT1A-216ENST00000491544 SRCAPQ6ZRS2 3230 aa17.86■□□□□ 0.45
PCYT1A-216ENST00000491544 IQGAP2Q13576 1575 aa17.84■□□□□ 0.45
PCYT1A-216ENST00000491544 FANCAO15360 1455 aa17.83■□□□□ 0.45
PCYT1A-216ENST00000491544 UHRF1BP1Q6BDS2 1440 aa17.81■□□□□ 0.44
PCYT1A-216ENST00000491544 FER1L4A9Z1Z3 1794 aa17.81■□□□□ 0.44
PCYT1A-216ENST00000491544 SIGLEC1Q9BZZ2 1709 aa17.81■□□□□ 0.44
PCYT1A-216ENST00000491544 IGF1RP08069 1367 aa17.8■□□□□ 0.44
PCYT1A-216ENST00000491544 NEO1Q92859 1461 aa17.79■□□□□ 0.44
PCYT1A-216ENST00000491544 MLECQ14165 292 aa17.76■□□□□ 0.43
PCYT1A-216ENST00000491544 CEBPAP49715 358 aaPredicted RBP17.75■□□□□ 0.43
PCYT1A-216ENST00000491544 AKNAQ7Z591 1439 aa17.74■□□□□ 0.43
PCYT1A-216ENST00000491544 KIAA0556O60303 1618 aa17.72■□□□□ 0.43
PCYT1A-216ENST00000491544 ABCA9Q8IUA7 1624 aa17.71■□□□□ 0.43
PCYT1A-216ENST00000491544 ARHGEF12Q9NZN5 1544 aa17.71■□□□□ 0.43
PCYT1A-216ENST00000491544 ZNF335Q9H4Z2 1342 aaPredicted RBP17.71■□□□□ 0.42
PCYT1A-216ENST00000491544 SCAF1Q9H7N4 1312 aaKnown RBP17.71■□□□□ 0.42
PCYT1A-216ENST00000491544 NCOA1Q15788 1441 aa17.7■□□□□ 0.42
PCYT1A-216ENST00000491544 UGGT2Q9NYU1 1516 aa17.69■□□□□ 0.42
PCYT1A-216ENST00000491544 PIP4K2BP78356 416 aa17.66■□□□□ 0.42
PCYT1A-216ENST00000491544 RGS17Q9UGC6 210 aaPredicted RBP17.66■□□□□ 0.42
PCYT1A-216ENST00000491544 ZFYVE16Q7Z3T8 1539 aa17.66■□□□□ 0.42
PCYT1A-216ENST00000491544 ABCA8O94911 1581 aa17.66■□□□□ 0.42
PCYT1A-216ENST00000491544 DENND4BO75064 1496 aaPredicted RBP17.65■□□□□ 0.42
PCYT1A-216ENST00000491544 RICTORQ6R327 1708 aa17.65■□□□□ 0.42
PCYT1A-216ENST00000491544 FHOD3Q2V2M9 1422 aa17.64■□□□□ 0.42
PCYT1A-216ENST00000491544 ZMYM4Q5VZL5 1548 aa17.63■□□□□ 0.41
PCYT1A-216ENST00000491544 CARMIL1Q5VZK9 1371 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms