RNA–Protein interactions for RNA: ENST00000491366.5

SEC22A-209, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 482 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-209ENST00000491366 RIMBP3BA6NNM3 1639 aa32.53■■■□□ 2.8
SEC22A-209ENST00000491366 RIMBP3Q9UFD9 1639 aa32.53■■■□□ 2.8
SEC22A-209ENST00000491366 KIAA0586Q9BVV6 1533 aa32.46■■■□□ 2.79
SEC22A-209ENST00000491366 SHROOM2Q13796 1616 aa32.42■■■□□ 2.78
SEC22A-209ENST00000491366 JPH4Q96JJ6 628 aa32.4■■■□□ 2.78
SEC22A-209ENST00000491366 ERCC6L2Q5T890 1561 aa32.35■■■□□ 2.77
SEC22A-209ENST00000491366 PRG4Q92954 1404 aaPredicted RBP32.34■■■□□ 2.77
SEC22A-209ENST00000491366 IQGAP2Q13576 1575 aa32.34■■■□□ 2.77
SEC22A-209ENST00000491366 ARAP1Q96P48 1450 aa32.32■■■□□ 2.76
SEC22A-209ENST00000491366 KIF21BO75037 1637 aa32.3■■■□□ 2.76
SEC22A-209ENST00000491366 EHMT2Q96KQ7 1210 aa32.29■■■□□ 2.76
SEC22A-209ENST00000491366 CTTNBP2Q8WZ74 1663 aa32.28■■■□□ 2.76
SEC22A-209ENST00000491366 CYB5RLQ6IPT4 315 aa32.28■■■□□ 2.76
SEC22A-209ENST00000491366 GOLGA3Q08378 1498 aa32.16■■■□□ 2.74
SEC22A-209ENST00000491366 UGGT2Q9NYU1 1516 aa32.15■■■□□ 2.74
SEC22A-209ENST00000491366 CARMIL2Q6F5E8 1435 aa32.13■■■□□ 2.73
SEC22A-209ENST00000491366 UBTFP17480 764 aaKnown RBP32.11■■■□□ 2.73
SEC22A-209ENST00000491366 DISP1Q96F81 1524 aa32.09■■■□□ 2.73
SEC22A-209ENST00000491366 TTBK1Q5TCY1 1321 aaPredicted RBP32.06■■■□□ 2.72
SEC22A-209ENST00000491366 RANGAP1P46060 587 aaPredicted RBP32.04■■■□□ 2.72
SEC22A-209ENST00000491366 KIAA0556O60303 1618 aa32.03■■■□□ 2.72
SEC22A-209ENST00000491366 TNIKQ9UKE5 1360 aa32.01■■■□□ 2.71
SEC22A-209ENST00000491366 PTPRGP23470 1445 aa31.98■■■□□ 2.71
SEC22A-209ENST00000491366 P3H3Q8IVL6 736 aa31.92■■■□□ 2.7
SEC22A-209ENST00000491366 SAMD9Q5K651 1589 aa31.88■■■□□ 2.69
SEC22A-209ENST00000491366 ADCY10Q96PN6 1610 aa31.8■■■□□ 2.68
SEC22A-209ENST00000491366 EFCAB5A4FU69 1503 aa31.79■■■□□ 2.68
SEC22A-209ENST00000491366 FHOD3Q2V2M9 1422 aa31.77■■■□□ 2.68
SEC22A-209ENST00000491366 UACAQ9BZF9 1416 aa31.75■■■□□ 2.67
SEC22A-209ENST00000491366 LOC105371045A0A1W2PR82 267 aa31.73■■■□□ 2.67
SEC22A-209ENST00000491366 PLB1Q6P1J6 1458 aa31.72■■■□□ 2.67
SEC22A-209ENST00000491366 NPM1P06748 294 aaKnown RBP eCLIP31.7■■■□□ 2.67
SEC22A-209ENST00000491366 ABCC2Q92887 1545 aa31.7■■■□□ 2.66
SEC22A-209ENST00000491366 ARHGAP35Q9NRY4 1499 aa31.69■■■□□ 2.66
SEC22A-209ENST00000491366 UHRF1BP1LA0JNW5 1464 aa31.68■■■□□ 2.66
SEC22A-209ENST00000491366 ABCA8O94911 1581 aa31.65■■■□□ 2.66
SEC22A-209ENST00000491366 CLIP1P30622 1438 aa31.61■■■□□ 2.65
SEC22A-209ENST00000491366 TRHP20396 242 aaPredicted RBP31.58■■■□□ 2.65
SEC22A-209ENST00000491366 RAPGEF6Q8TEU7 1601 aa31.55■■■□□ 2.64
SEC22A-209ENST00000491366 ARID3CA6NKF2 412 aa31.54■■■□□ 2.64
SEC22A-209ENST00000491366 KDM5BQ9UGL1 1544 aa31.54■■■□□ 2.64
SEC22A-209ENST00000491366 CEP162Q5TB80 1403 aa31.52■■■□□ 2.64
SEC22A-209ENST00000491366 MAPKBP1O60336 1514 aa31.52■■■□□ 2.64
SEC22A-209ENST00000491366 ZCCHC11Q5TAX3 1644 aaKnown RBP31.51■■■□□ 2.63
SEC22A-209ENST00000491366 FMN1Q68DA7 1419 aa31.5■■■□□ 2.63
SEC22A-209ENST00000491366 ASXL2Q76L83 1435 aa31.44■■■□□ 2.62
SEC22A-209ENST00000491366 NUP153P49790 1475 aaKnown RBP31.44■■■□□ 2.62
SEC22A-209ENST00000491366 ATP1B4Q9UN42 357 aaPredicted RBP31.42■■■□□ 2.62
SEC22A-209ENST00000491366 ATP10BO94823 1461 aa31.4■■■□□ 2.62
SEC22A-209ENST00000491366 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.39■■■□□ 2.62
SEC22A-209ENST00000491366 HNRNPUL2Q1KMD3 747 aaKnown RBP31.39■■■□□ 2.62
SEC22A-209ENST00000491366 ABCC10Q5T3U5 1492 aa31.36■■■□□ 2.61
SEC22A-209ENST00000491366 HECW1Q76N89 1606 aa31.35■■■□□ 2.61
SEC22A-209ENST00000491366 FAM69CQ0P6D2 419 aa31.34■■■□□ 2.61
SEC22A-209ENST00000491366 PCF11O94913 1555 aaKnown RBP31.32■■■□□ 2.6
SEC22A-209ENST00000491366 DIP2BQ9P265 1576 aa31.32■■■□□ 2.6
SEC22A-209ENST00000491366 WDR7Q9Y4E6 1490 aa31.31■■■□□ 2.6
SEC22A-209ENST00000491366 KIF13AQ9H1H9 1805 aa31.3■■■□□ 2.6
SEC22A-209ENST00000491366 CASKIN1Q8WXD9 1431 aa31.28■■■□□ 2.6
SEC22A-209ENST00000491366 CDK13Q14004 1512 aaKnown RBP31.28■■■□□ 2.6
SEC22A-209ENST00000491366 EPRSP07814 1512 aaKnown RBP31.25■■■□□ 2.59
SEC22A-209ENST00000491366 KCNH8Q96L42 1107 aa31.24■■■□□ 2.59
SEC22A-209ENST00000491366 FYCO1Q9BQS8 1478 aa31.22■■■□□ 2.59
SEC22A-209ENST00000491366 LRRIQ1Q96JM4 1722 aa31.18■■■□□ 2.58
SEC22A-209ENST00000491366 PLEKHD1A6NEE1 506 aa31.17■■■□□ 2.58
SEC22A-209ENST00000491366 GLI2P10070 1586 aa31.17■■■□□ 2.58
SEC22A-209ENST00000491366 CCDC18Q5T9S5 1454 aa31.14■■■□□ 2.57
SEC22A-209ENST00000491366 VPS8Q8N3P4 1428 aa31.11■■■□□ 2.57
SEC22A-209ENST00000491366 CDK11AQ9UQ88 783 aaPredicted RBP31.09■■■□□ 2.57
SEC22A-209ENST00000491366 TSPOAP1O95153 1857 aa31.08■■■□□ 2.57
SEC22A-209ENST00000491366 MAP3K4Q9Y6R4 1608 aa31.06■■■□□ 2.56
SEC22A-209ENST00000491366 CFAP43Q8NDM7 1665 aa31■■■□□ 2.55
SEC22A-209ENST00000491366 CD109Q6YHK3 1445 aa31■■■□□ 2.55
SEC22A-209ENST00000491366 TROQ12816 1431 aaPredicted RBP30.99■■■□□ 2.55
SEC22A-209ENST00000491366 ABCA9Q8IUA7 1624 aa30.98■■■□□ 2.55
SEC22A-209ENST00000491366 PPRC1Q5VV67 1664 aaKnown RBP30.97■■■□□ 2.55
SEC22A-209ENST00000491366 MAGI3Q5TCQ9 1506 aa30.96■■■□□ 2.55
SEC22A-209ENST00000491366 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.93■■■□□ 2.54
SEC22A-209ENST00000491366 KIF14Q15058 1648 aa30.92■■■□□ 2.54
SEC22A-209ENST00000491366 TTC37Q6PGP7 1564 aa30.92■■■□□ 2.54
SEC22A-209ENST00000491366 TEX14Q8IWB6 1497 aa30.9■■■□□ 2.54
SEC22A-209ENST00000491366 MTUS2Q5JR59 1369 aa30.88■■■□□ 2.53
SEC22A-209ENST00000491366 TIAM1Q13009 1591 aa30.86■■■□□ 2.53
SEC22A-209ENST00000491366 EHBP1L1Q8N3D4 1523 aa30.8■■■□□ 2.52
SEC22A-209ENST00000491366 APLP2Q06481 763 aa30.79■■■□□ 2.52
SEC22A-209ENST00000491366 KDM6BO15054 1643 aa30.78■■■□□ 2.52
SEC22A-209ENST00000491366 MAP3K1Q13233 1512 aa30.75■■■□□ 2.51
SEC22A-209ENST00000491366 MYO5CQ9NQX4 1742 aa30.75■■■□□ 2.51
SEC22A-209ENST00000491366 PLCH2O75038 1416 aa30.74■■■□□ 2.51
SEC22A-209ENST00000491366 FANCAO15360 1455 aa30.72■■■□□ 2.51
SEC22A-209ENST00000491366 LRRC9Q6ZRR7 1453 aa30.72■■■□□ 2.51
SEC22A-209ENST00000491366 NEO1Q92859 1461 aa30.7■■■□□ 2.51
SEC22A-209ENST00000491366 KANK4Q5T7N3 995 aaPredicted RBP30.7■■■□□ 2.51
SEC22A-209ENST00000491366 COL17A1Q9UMD9 1497 aaPredicted RBP30.69■■■□□ 2.5
SEC22A-209ENST00000491366 ARHGAP5Q13017 1502 aa30.68■■■□□ 2.5
SEC22A-209ENST00000491366 CFAP74Q9C0B2 1584 aa30.67■■■□□ 2.5
SEC22A-209ENST00000491366 ARAP3Q8WWN8 1544 aa30.65■■■□□ 2.5
SEC22A-209ENST00000491366 PREX2Q70Z35 1606 aa30.65■■■□□ 2.5
SEC22A-209ENST00000491366 PHLDB1Q86UU1 1377 aa30.65■■■□□ 2.5
SEC22A-209ENST00000491366 CCNB3Q8WWL7 1395 aa30.65■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms