RNA–Protein interactions for RNA: ENST00000491349.5

RNF38-209, Transcript of ring finger protein 38, humanhuman

TSL 5

Gene RNF38, Length 959 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-209ENST00000491349 SNAPC4Q5SXM2 1469 aa13.72□□□□□ -0.21
RNF38-209ENST00000491349 CHMP7Q8WUX9 453 aaPredicted RBP13.71□□□□□ -0.21
RNF38-209ENST00000491349 SYNJ2O15056 1496 aa13.68□□□□□ -0.22
RNF38-209ENST00000491349 FHAD1B1AJZ9 1412 aa13.68□□□□□ -0.22
RNF38-209ENST00000491349 CHD1O14646 1710 aa13.67□□□□□ -0.22
RNF38-209ENST00000491349 NPM3O75607 178 aaKnown RBP13.67□□□□□ -0.22
RNF38-209ENST00000491349 ADAMTS12P58397 1594 aa13.66□□□□□ -0.22
RNF38-209ENST00000491349 OSCARQ8IYS5 282 aa13.64□□□□□ -0.23
RNF38-209ENST00000491349 IGF1RP08069 1367 aa13.63□□□□□ -0.23
RNF38-209ENST00000491349 CARMIL1Q5VZK9 1371 aa13.63□□□□□ -0.23
RNF38-209ENST00000491349 CSRNP3Q8WYN3 585 aa13.62□□□□□ -0.23
RNF38-209ENST00000491349 FAM9AQ8IZU1 332 aaPredicted RBP13.61□□□□□ -0.23
RNF38-209ENST00000491349 RUSC2Q8N2Y8 1516 aa13.6□□□□□ -0.23
RNF38-209ENST00000491349 GRIN2AQ12879 1464 aa13.6□□□□□ -0.23
RNF38-209ENST00000491349 RAPGEF2Q9Y4G8 1499 aa13.59□□□□□ -0.23
RNF38-209ENST00000491349 C1QBPQ07021 282 aaKnown RBP13.52□□□□□ -0.25
RNF38-209ENST00000491349 KIF21BO75037 1637 aa13.52□□□□□ -0.25
RNF38-209ENST00000491349 PRXQ9BXM0 1461 aa13.51□□□□□ -0.25
RNF38-209ENST00000491349 CTTNBP2Q8WZ74 1663 aa13.5□□□□□ -0.25
RNF38-209ENST00000491349 NUP160Q12769 1436 aa13.49□□□□□ -0.25
RNF38-209ENST00000491349 CEP170Q5SW79 1584 aa13.49□□□□□ -0.25
RNF38-209ENST00000491349 GOLGA3Q08378 1498 aa13.48□□□□□ -0.25
RNF38-209ENST00000491349 UBTFP17480 764 aaKnown RBP13.47□□□□□ -0.25
RNF38-209ENST00000491349 KIAA0586Q9BVV6 1533 aa13.47□□□□□ -0.25
RNF38-209ENST00000491349 CLASP1Q7Z460 1538 aa13.46□□□□□ -0.25
RNF38-209ENST00000491349 IQGAP2Q13576 1575 aa13.45□□□□□ -0.26
RNF38-209ENST00000491349 KCNA4P22459 653 aa13.42□□□□□ -0.26
RNF38-209ENST00000491349 EHMT2Q96KQ7 1210 aa13.42□□□□□ -0.26
RNF38-209ENST00000491349 DNAJC5Q9H3Z4 198 aa13.42□□□□□ -0.26
RNF38-209ENST00000491349 CARMIL2Q6F5E8 1435 aa13.41□□□□□ -0.26
RNF38-209ENST00000491349 JPH4Q96JJ6 628 aa13.41□□□□□ -0.26
RNF38-209ENST00000491349 SHROOM2Q13796 1616 aa13.39□□□□□ -0.27
RNF38-209ENST00000491349 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.38□□□□□ -0.27
RNF38-209ENST00000491349 PRG4Q92954 1404 aaPredicted RBP13.36□□□□□ -0.27
RNF38-209ENST00000491349 ARHGEF11O15085 1522 aa13.35□□□□□ -0.27
RNF38-209ENST00000491349 RIMBP3CA6NJZ7 1639 aa13.35□□□□□ -0.27
RNF38-209ENST00000491349 RIMBP3BA6NNM3 1639 aa13.35□□□□□ -0.27
RNF38-209ENST00000491349 RIMBP3Q9UFD9 1639 aa13.35□□□□□ -0.27
RNF38-209ENST00000491349 UGGT2Q9NYU1 1516 aa13.34□□□□□ -0.27
RNF38-209ENST00000491349 RANGAP1P46060 587 aaPredicted RBP13.32□□□□□ -0.28
RNF38-209ENST00000491349 TNIKQ9UKE5 1360 aa13.31□□□□□ -0.28
RNF38-209ENST00000491349 EFCAB5A4FU69 1503 aa13.3□□□□□ -0.28
RNF38-209ENST00000491349 KIAA0556O60303 1618 aa13.28□□□□□ -0.28
RNF38-209ENST00000491349 TTBK1Q5TCY1 1321 aaPredicted RBP13.26□□□□□ -0.29
RNF38-209ENST00000491349 PTPRGP23470 1445 aa13.25□□□□□ -0.29
RNF38-209ENST00000491349 CYB5RLQ6IPT4 315 aa13.25□□□□□ -0.29
RNF38-209ENST00000491349 SAMD9Q5K651 1589 aa13.24□□□□□ -0.29
RNF38-209ENST00000491349 DISP1Q96F81 1524 aa13.24□□□□□ -0.29
RNF38-209ENST00000491349 ERCC6L2Q5T890 1561 aa13.24□□□□□ -0.29
RNF38-209ENST00000491349 LOC105371045A0A1W2PR82 267 aa13.23□□□□□ -0.29
RNF38-209ENST00000491349 P3H3Q8IVL6 736 aa13.23□□□□□ -0.29
RNF38-209ENST00000491349 NPM1P06748 294 aaKnown RBP eCLIP13.22□□□□□ -0.29
RNF38-209ENST00000491349 ARAP1Q96P48 1450 aa13.22□□□□□ -0.29
RNF38-209ENST00000491349 CLIP1P30622 1438 aa13.22□□□□□ -0.29
RNF38-209ENST00000491349 FMN1Q68DA7 1419 aa13.2□□□□□ -0.3
RNF38-209ENST00000491349 CEP162Q5TB80 1403 aa13.19□□□□□ -0.3
RNF38-209ENST00000491349 FHOD3Q2V2M9 1422 aa13.17□□□□□ -0.3
RNF38-209ENST00000491349 U3KPZ7 1027 aaPredicted RBP13.17□□□□□ -0.3
RNF38-209ENST00000491349 ARHGAP35Q9NRY4 1499 aa13.16□□□□□ -0.3
RNF38-209ENST00000491349 UACAQ9BZF9 1416 aa13.16□□□□□ -0.3
RNF38-209ENST00000491349 RAPGEF6Q8TEU7 1601 aa13.13□□□□□ -0.31
RNF38-209ENST00000491349 ATP1B4Q9UN42 357 aaPredicted RBP13.13□□□□□ -0.31
RNF38-209ENST00000491349 ABCC2Q92887 1545 aa13.13□□□□□ -0.31
RNF38-209ENST00000491349 UHRF1BP1LA0JNW5 1464 aa13.12□□□□□ -0.31
RNF38-209ENST00000491349 HECW1Q76N89 1606 aa13.11□□□□□ -0.31
RNF38-209ENST00000491349 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.11□□□□□ -0.31
RNF38-209ENST00000491349 HNRNPUL2Q1KMD3 747 aaKnown RBP13.11□□□□□ -0.31
RNF38-209ENST00000491349 ABCA8O94911 1581 aa13.1□□□□□ -0.31
RNF38-209ENST00000491349 ADCY10Q96PN6 1610 aa13.1□□□□□ -0.31
RNF38-209ENST00000491349 PLB1Q6P1J6 1458 aa13.09□□□□□ -0.31
RNF38-209ENST00000491349 SLC4A2P04920 1241 aa13.07□□□□□ -0.32
RNF38-209ENST00000491349 APLP2Q06481 763 aa13.07□□□□□ -0.32
RNF38-209ENST00000491349 CDK11AQ9UQ88 783 aaPredicted RBP13.07□□□□□ -0.32
RNF38-209ENST00000491349 CCDC18Q5T9S5 1454 aa13.05□□□□□ -0.32
RNF38-209ENST00000491349 FYCO1Q9BQS8 1478 aa13.05□□□□□ -0.32
RNF38-209ENST00000491349 ZCCHC11Q5TAX3 1644 aaKnown RBP13.05□□□□□ -0.32
RNF38-209ENST00000491349 CASKIN1Q8WXD9 1431 aa13.05□□□□□ -0.32
RNF38-209ENST00000491349 KDM5BQ9UGL1 1544 aa13.03□□□□□ -0.32
RNF38-209ENST00000491349 VPS8Q8N3P4 1428 aa13.03□□□□□ -0.32
RNF38-209ENST00000491349 PCF11O94913 1555 aaKnown RBP13.03□□□□□ -0.32
RNF38-209ENST00000491349 MAPKBP1O60336 1514 aa13.02□□□□□ -0.33
RNF38-209ENST00000491349 PLEKHD1A6NEE1 506 aa13.01□□□□□ -0.33
RNF38-209ENST00000491349 ARID3CA6NKF2 412 aa13.01□□□□□ -0.33
RNF38-209ENST00000491349 NUP153P49790 1475 aaKnown RBP13.01□□□□□ -0.33
RNF38-209ENST00000491349 EPRSP07814 1512 aaKnown RBP12.99□□□□□ -0.33
RNF38-209ENST00000491349 TRHP20396 242 aaPredicted RBP12.99□□□□□ -0.33
RNF38-209ENST00000491349 ATP10BO94823 1461 aa12.98□□□□□ -0.33
RNF38-209ENST00000491349 ASXL2Q76L83 1435 aa12.97□□□□□ -0.33
RNF38-209ENST00000491349 WDR7Q9Y4E6 1490 aa12.97□□□□□ -0.33
RNF38-209ENST00000491349 SPINK5Q9NQ38 1064 aaPredicted RBP12.95□□□□□ -0.34
RNF38-209ENST00000491349 CDK13Q14004 1512 aaKnown RBP12.94□□□□□ -0.34
RNF38-209ENST00000491349 MTUS2Q5JR59 1369 aa12.94□□□□□ -0.34
RNF38-209ENST00000491349 KCNH8Q96L42 1107 aa12.93□□□□□ -0.34
RNF38-209ENST00000491349 LRRIQ1Q96JM4 1722 aa12.93□□□□□ -0.34
RNF38-209ENST00000491349 CFAP43Q8NDM7 1665 aa12.93□□□□□ -0.34
RNF38-209ENST00000491349 FAM69CQ0P6D2 419 aa12.92□□□□□ -0.34
RNF38-209ENST00000491349 KIF14Q15058 1648 aa12.91□□□□□ -0.34
RNF38-209ENST00000491349 ABCC10Q5T3U5 1492 aa12.91□□□□□ -0.34
RNF38-209ENST00000491349 MAP3K1Q13233 1512 aa12.91□□□□□ -0.34
RNF38-209ENST00000491349 TIAM1Q13009 1591 aa12.9□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms