RNA–Protein interactions for RNA: ENST00000491160.1

PBX3-208, Transcript of PBX homeobox 3, humanhuman

TSL 5

Gene PBX3, Length 679 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-208ENST00000491160 RAD54L2Q9Y4B4 1467 aa12.21□□□□□ -0.46
PBX3-208ENST00000491160 ZNF219Q9P2Y4 722 aaPredicted RBP12.2□□□□□ -0.46
PBX3-208ENST00000491160 TDRD9Q8NDG6 1382 aaKnown RBP12.19□□□□□ -0.46
PBX3-208ENST00000491160 KCNA4P22459 653 aa12.19□□□□□ -0.46
PBX3-208ENST00000491160 SOGA1O94964 1423 aa12.16□□□□□ -0.46
PBX3-208ENST00000491160 SNAPC4Q5SXM2 1469 aa12.15□□□□□ -0.46
PBX3-208ENST00000491160 SLC4A2P04920 1241 aa12.15□□□□□ -0.46
PBX3-208ENST00000491160 CHMP7Q8WUX9 453 aaPredicted RBP12.15□□□□□ -0.46
PBX3-208ENST00000491160 CLASP1Q7Z460 1538 aa12.14□□□□□ -0.47
PBX3-208ENST00000491160 SYNJ1O43426 1573 aa12.1□□□□□ -0.47
PBX3-208ENST00000491160 FGD5Q6ZNL6 1462 aa12.09□□□□□ -0.47
PBX3-208ENST00000491160 SAMD1Q6SPF0 538 aaPredicted RBP12.08□□□□□ -0.48
PBX3-208ENST00000491160 MAGI1Q96QZ7 1491 aaPredicted RBP12.07□□□□□ -0.48
PBX3-208ENST00000491160 ABCB7O75027 752 aa12.06□□□□□ -0.48
PBX3-208ENST00000491160 GRIN2BQ13224 1484 aa12.06□□□□□ -0.48
PBX3-208ENST00000491160 SYNJ2O15056 1496 aa12.05□□□□□ -0.48
PBX3-208ENST00000491160 GAPVD1Q14C86 1478 aa12.05□□□□□ -0.48
PBX3-208ENST00000491160 CUX1P39880 1505 aa12.05□□□□□ -0.48
PBX3-208ENST00000491160 WDR97A6NE52 1622 aa12.04□□□□□ -0.48
PBX3-208ENST00000491160 PBRM1Q86U86 1689 aa12.02□□□□□ -0.49
PBX3-208ENST00000491160 ERCC6L2Q5T890 1561 aa12□□□□□ -0.49
PBX3-208ENST00000491160 RBM42Q9BTD8 480 aaKnown RBP11.95□□□□□ -0.5
PBX3-208ENST00000491160 ABCA5Q8WWZ7 1642 aa11.93□□□□□ -0.5
PBX3-208ENST00000491160 ABCA10Q8WWZ4 1543 aa11.91□□□□□ -0.5
PBX3-208ENST00000491160 CEP170Q5SW79 1584 aa11.91□□□□□ -0.5
PBX3-208ENST00000491160 GRIN2AQ12879 1464 aa11.9□□□□□ -0.5
PBX3-208ENST00000491160 KIF13AQ9H1H9 1805 aa11.89□□□□□ -0.51
PBX3-208ENST00000491160 ADAMTS12P58397 1594 aa11.87□□□□□ -0.51
PBX3-208ENST00000491160 NUP160Q12769 1436 aa11.86□□□□□ -0.51
PBX3-208ENST00000491160 SHROOM2Q13796 1616 aa11.85□□□□□ -0.51
PBX3-208ENST00000491160 MYCNP04198 464 aaPredicted RBP11.84□□□□□ -0.51
PBX3-208ENST00000491160 WRNQ14191 1432 aaPredicted RBP eCLIP11.82□□□□□ -0.52
PBX3-208ENST00000491160 FHAD1B1AJZ9 1412 aa11.81□□□□□ -0.52
PBX3-208ENST00000491160 PRG4Q92954 1404 aaPredicted RBP11.81□□□□□ -0.52
PBX3-208ENST00000491160 FAM69CQ0P6D2 419 aa11.81□□□□□ -0.52
PBX3-208ENST00000491160 JPH4Q96JJ6 628 aa11.79□□□□□ -0.52
PBX3-208ENST00000491160 TOP2BQ02880 1626 aa11.76□□□□□ -0.53
PBX3-208ENST00000491160 BIVM-ERCC5R4GMW8 1640 aa11.76□□□□□ -0.53
PBX3-208ENST00000491160 KDM4FA0A1W2PPD8 638 aa11.76□□□□□ -0.53
PBX3-208ENST00000491160 SUPT5HO00267 1087 aaKnown RBP11.76□□□□□ -0.53
PBX3-208ENST00000491160 NPM1P06748 294 aaKnown RBP eCLIP11.76□□□□□ -0.53
PBX3-208ENST00000491160 ABCC10Q5T3U5 1492 aa11.76□□□□□ -0.53
PBX3-208ENST00000491160 POLA2Q14181 598 aa11.75□□□□□ -0.53
PBX3-208ENST00000491160 ERICH3Q5RHP9 1530 aa11.75□□□□□ -0.53
PBX3-208ENST00000491160 TSPOAP1O95153 1857 aa11.74□□□□□ -0.53
PBX3-208ENST00000491160 DIP2BQ9P265 1576 aa11.72□□□□□ -0.53
PBX3-208ENST00000491160 ADCY10Q96PN6 1610 aa11.71□□□□□ -0.53
PBX3-208ENST00000491160 KDM6BO15054 1643 aa11.71□□□□□ -0.54
PBX3-208ENST00000491160 MAPKBP1O60336 1514 aa11.7□□□□□ -0.54
PBX3-208ENST00000491160 RUSC2Q8N2Y8 1516 aa11.7□□□□□ -0.54
PBX3-208ENST00000491160 CHRDL2Q6WN34 429 aa11.7□□□□□ -0.54
PBX3-208ENST00000491160 ILDR1Q86SU0 546 aaPredicted RBP11.7□□□□□ -0.54
PBX3-208ENST00000491160 TTBK1Q5TCY1 1321 aaPredicted RBP11.66□□□□□ -0.54
PBX3-208ENST00000491160 ZBTB12Q9Y330 459 aaPredicted RBP11.64□□□□□ -0.55
PBX3-208ENST00000491160 KIAA0586Q9BVV6 1533 aa11.6□□□□□ -0.55
PBX3-208ENST00000491160 IGF1RP08069 1367 aa11.58□□□□□ -0.56
PBX3-208ENST00000491160 PTPRGP23470 1445 aa11.58□□□□□ -0.56
PBX3-208ENST00000491160 PPRC1Q5VV67 1664 aaKnown RBP11.57□□□□□ -0.56
PBX3-208ENST00000491160 AKT1S1Q96B36 256 aa11.57□□□□□ -0.56
PBX3-208ENST00000491160 ADGRL1O94910 1474 aa11.57□□□□□ -0.56
PBX3-208ENST00000491160 ASXL2Q76L83 1435 aa11.55□□□□□ -0.56
PBX3-208ENST00000491160 FOXD4L1Q9NU39 408 aa11.55□□□□□ -0.56
PBX3-208ENST00000491160 CUL7Q14999 1698 aa11.54□□□□□ -0.56
PBX3-208ENST00000491160 ABCC2Q92887 1545 aa11.54□□□□□ -0.56
PBX3-208ENST00000491160 SLC4A1APQ9BWU0 796 aaKnown RBP11.53□□□□□ -0.56
PBX3-208ENST00000491160 COL17A1Q9UMD9 1497 aaPredicted RBP11.52□□□□□ -0.56
PBX3-208ENST00000491160 TNIKQ9UKE5 1360 aa11.52□□□□□ -0.57
PBX3-208ENST00000491160 KIF27Q86VH2 1401 aa11.52□□□□□ -0.57
PBX3-208ENST00000491160 GLI2P10070 1586 aa11.51□□□□□ -0.57
PBX3-208ENST00000491160 PLB1Q6P1J6 1458 aa11.51□□□□□ -0.57
PBX3-208ENST00000491160 HECW2Q9P2P5 1572 aa11.5□□□□□ -0.57
PBX3-208ENST00000491160 CARMIL2Q6F5E8 1435 aa11.5□□□□□ -0.57
PBX3-208ENST00000491160 CARMIL1Q5VZK9 1371 aa11.49□□□□□ -0.57
PBX3-208ENST00000491160 MAP3K4Q9Y6R4 1608 aa11.47□□□□□ -0.57
PBX3-208ENST00000491160 EPRSP07814 1512 aaKnown RBP11.47□□□□□ -0.57
PBX3-208ENST00000491160 UACAQ9BZF9 1416 aa11.47□□□□□ -0.57
PBX3-208ENST00000491160 IQGAP2Q13576 1575 aa11.46□□□□□ -0.57
PBX3-208ENST00000491160 UHRF1BP1LA0JNW5 1464 aa11.46□□□□□ -0.57
PBX3-208ENST00000491160 DISP1Q96F81 1524 aa11.45□□□□□ -0.58
PBX3-208ENST00000491160 ZCCHC11Q5TAX3 1644 aaKnown RBP11.44□□□□□ -0.58
PBX3-208ENST00000491160 KDM5BQ9UGL1 1544 aa11.43□□□□□ -0.58
PBX3-208ENST00000491160 ATF5Q9Y2D1 282 aaPredicted RBP11.42□□□□□ -0.58
PBX3-208ENST00000491160 TEX14Q8IWB6 1497 aa11.42□□□□□ -0.58
PBX3-208ENST00000491160 REM2Q8IYK8 340 aaPredicted RBP11.4□□□□□ -0.58
PBX3-208ENST00000491160 SP7Q8TDD2 431 aaPredicted RBP11.4□□□□□ -0.58
PBX3-208ENST00000491160 KCNH8Q96L42 1107 aa11.39□□□□□ -0.59
PBX3-208ENST00000491160 KIAA0556O60303 1618 aa11.37□□□□□ -0.59
PBX3-208ENST00000491160 WDR7Q9Y4E6 1490 aa11.37□□□□□ -0.59
PBX3-208ENST00000491160 UGGT2Q9NYU1 1516 aa11.36□□□□□ -0.59
PBX3-208ENST00000491160 CD109Q6YHK3 1445 aa11.35□□□□□ -0.59
PBX3-208ENST00000491160 KIF21BO75037 1637 aa11.35□□□□□ -0.59
PBX3-208ENST00000491160 RAPGEF2Q9Y4G8 1499 aa11.33□□□□□ -0.6
PBX3-208ENST00000491160 PIP4P2Q8N4L2 257 aa11.33□□□□□ -0.6
PBX3-208ENST00000491160 FBXO41Q8TF61 875 aa11.33□□□□□ -0.6
PBX3-208ENST00000491160 MAGI3Q5TCQ9 1506 aa11.32□□□□□ -0.6
PBX3-208ENST00000491160 CFAP43Q8NDM7 1665 aa11.32□□□□□ -0.6
PBX3-208ENST00000491160 ARID3CA6NKF2 412 aa11.31□□□□□ -0.6
PBX3-208ENST00000491160 ABCA8O94911 1581 aa11.28□□□□□ -0.6
PBX3-208ENST00000491160 CTTNBP2Q8WZ74 1663 aa11.27□□□□□ -0.6
PBX3-208ENST00000491160 PITPNM1O00562 1244 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms